BLASTX nr result
ID: Sinomenium22_contig00001039
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00001039
(260 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citr... 162 4e-38
ref|XP_006827867.1| hypothetical protein AMTR_s00008p00089340 [A... 162 6e-38
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro... 160 2e-37
ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloro... 157 2e-36
gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea] 155 4e-36
ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutr... 155 6e-36
ref|XP_006399942.1| hypothetical protein EUTSA_v10014848mg [Eutr... 155 6e-36
ref|XP_007018955.1| Ribosomal protein S13/S18 family [Theobroma ... 155 6e-36
gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi] gi|1... 155 6e-36
ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana... 155 7e-36
ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Caps... 155 7e-36
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus... 155 7e-36
gb|AFK44070.1| unknown [Lotus japonicus] 154 1e-35
ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycin... 154 2e-35
ref|NP_001237689.1| uncharacterized protein LOC100499902 [Glycin... 154 2e-35
ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Popu... 153 2e-35
gb|AFK45217.1| unknown [Lotus japonicus] 152 4e-35
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras... 152 4e-35
ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloro... 152 6e-35
ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloro... 152 6e-35
>ref|XP_006434118.1| hypothetical protein CICLE_v10002692mg [Citrus clementina]
gi|568837402|ref|XP_006472713.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Citrus
sinensis] gi|557536240|gb|ESR47358.1| hypothetical
protein CICLE_v10002692mg [Citrus clementina]
Length = 169
Score = 162 bits (411), Expect = 4e-38
Identities = 76/86 (88%), Positives = 84/86 (97%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL ++NKITKD+++EELI++RDEVSKYMIEGDLRRFNALAIRRLKEIQCYRG+
Sbjct: 75 RARQILVDLKMENKITKDMSEEELITIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGI 134
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQHTKNNCRTLKGKRVA
Sbjct: 135 RHIQGLPCRGQHTKNNCRTLKGKRVA 160
>ref|XP_006827867.1| hypothetical protein AMTR_s00008p00089340 [Amborella trichopoda]
gi|548832502|gb|ERM95283.1| hypothetical protein
AMTR_s00008p00089340 [Amborella trichopoda]
Length = 167
Score = 162 bits (409), Expect = 6e-38
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RA QILCDL +QNKITKDL++EEL SVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV
Sbjct: 73 RALQILCDLGMQNKITKDLSEEELKSVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 132
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHI GLPCRGQHTKNNCRTLKGK+VA
Sbjct: 133 RHIMGLPCRGQHTKNNCRTLKGKKVA 158
>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
product [Vitis vinifera]
Length = 167
Score = 160 bits (404), Expect = 2e-37
Identities = 74/86 (86%), Positives = 84/86 (97%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
R++QILCDL ++NKITKDL++EELI++RDEVSKYMIEGDLRRFNALAIRRLKEIQCYRG+
Sbjct: 74 RSKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGI 133
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGKRV+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKRVS 159
>ref|XP_004140327.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Cucumis
sativus] gi|449518817|ref|XP_004166432.1| PREDICTED: 30S
ribosomal protein S13, chloroplastic-like [Cucumis
sativus]
Length = 167
Score = 157 bits (396), Expect = 2e-36
Identities = 73/85 (85%), Positives = 83/85 (97%)
Frame = -1
Query: 257 ARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 78
A++IL DLN++NKITKDL++EELIS+RDEVSKYMIEGDLRRFNALAIRRLKEIQCYRG+R
Sbjct: 74 AKKILFDLNVENKITKDLSEEELISIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIR 133
Query: 77 HIQGLPCRGQHTKNNCRTLKGKRVA 3
HIQGLPCRGQ TKNNCRTLKGK++A
Sbjct: 134 HIQGLPCRGQRTKNNCRTLKGKKIA 158
>gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea]
Length = 158
Score = 155 bits (393), Expect = 4e-36
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = -1
Query: 257 ARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 78
+RQIL DLNL NK+TKDL++EEL S+RDEVSKYMIEGDLRRFNALAIRRLKEIQCYRG+R
Sbjct: 67 SRQILNDLNLDNKLTKDLSEEELTSLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGMR 126
Query: 77 HIQGLPCRGQHTKNNCRTLKGKRVA 3
HIQGLPCRGQ TKNNCRTLKGKRVA
Sbjct: 127 HIQGLPCRGQRTKNNCRTLKGKRVA 151
>ref|XP_006399943.1| hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
gi|557101033|gb|ESQ41396.1| hypothetical protein
EUTSA_v10014848mg [Eutrema salsugineum]
Length = 169
Score = 155 bits (392), Expect = 6e-36
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL ++NKITKD+ +EELI +RDEVSKYMIEGDLRRFNALAI+RLKEIQCYRGV
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 135 RHIQGLPCRGQRTKNNCRTLKGKKVA 160
>ref|XP_006399942.1| hypothetical protein EUTSA_v10014848mg [Eutrema salsugineum]
gi|557101032|gb|ESQ41395.1| hypothetical protein
EUTSA_v10014848mg [Eutrema salsugineum]
Length = 168
Score = 155 bits (392), Expect = 6e-36
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL ++NKITKD+ +EELI +RDEVSKYMIEGDLRRFNALAI+RLKEIQCYRGV
Sbjct: 74 RARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 133
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKKVA 159
>ref|XP_007018955.1| Ribosomal protein S13/S18 family [Theobroma cacao]
gi|508724283|gb|EOY16180.1| Ribosomal protein S13/S18
family [Theobroma cacao]
Length = 168
Score = 155 bits (392), Expect = 6e-36
Identities = 74/85 (87%), Positives = 81/85 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RAR+ILCDL ++NKITKDL++EELI++RDEVSKYMIEGDLRRFNAL IRRLKEIQCYRGV
Sbjct: 74 RARKILCDLKMENKITKDLSEEELITIRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGV 133
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRV 6
RHIQGLPCRGQ TKNN RTLKGKRV
Sbjct: 134 RHIQGLPCRGQRTKNNTRTLKGKRV 158
>gb|ACA58360.1| 30S ribosomal protein S13-1 [Arachis diogoi]
gi|169635172|gb|ACA58361.1| 30S ribosomal protein S13-2
[Arachis diogoi]
Length = 121
Score = 155 bits (392), Expect = 6e-36
Identities = 71/86 (82%), Positives = 83/86 (96%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RAR+ILCD+++ NK+TKDL++EELI++RDEVSKY+IEGDLRRFNAL IRRLKEIQCYRG+
Sbjct: 29 RARKILCDISMDNKVTKDLSEEELITLRDEVSKYVIEGDLRRFNALNIRRLKEIQCYRGI 88
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 89 RHIQGLPCRGQRTKNNCRTLKGKKVA 114
>ref|NP_568299.1| 30S ribosomal protein S13 [Arabidopsis thaliana]
gi|1173194|sp|P42732.1|RR13_ARATH RecName: Full=30S
ribosomal protein S13, chloroplastic; AltName:
Full=CS13; Flags: Precursor gi|16767|emb|CAA79013.1|
chloroplast 30S ribosomal protein S13 [Arabidopsis
thaliana] gi|662869|emb|CAA88028.1| chloroplast
ribosomal protein S13 [Arabidopsis thaliana]
gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13
[Arabidopsis thaliana] gi|1515107|emb|CAA60413.1|
plastid ribosomal protein S13 [Arabidopsis thaliana]
gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110
[Arabidopsis thaliana] gi|15450549|gb|AAK96452.1|
AT5g14320/F18O22_110 [Arabidopsis thaliana]
gi|332004633|gb|AED92016.1| 30S ribosomal protein S13
[Arabidopsis thaliana]
Length = 169
Score = 155 bits (391), Expect = 7e-36
Identities = 73/86 (84%), Positives = 81/86 (94%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL ++NKITKD+ +EELI +RDEVSKYMIEGDLRRFNALAI+RLKEIQCYRGV
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK++A
Sbjct: 135 RHIQGLPCRGQRTKNNCRTLKGKKIA 160
>ref|XP_006288790.1| hypothetical protein CARUB_v10002113mg [Capsella rubella]
gi|482557496|gb|EOA21688.1| hypothetical protein
CARUB_v10002113mg [Capsella rubella]
Length = 169
Score = 155 bits (391), Expect = 7e-36
Identities = 73/86 (84%), Positives = 81/86 (94%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL ++NKITKD+ +EELI +RDEVSKYMIEGDLRRFNALAI+RLKEIQCYRGV
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK++A
Sbjct: 135 RHIQGLPCRGQRTKNNCRTLKGKKIA 160
>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
putative [Ricinus communis]
Length = 290
Score = 155 bits (391), Expect = 7e-36
Identities = 74/85 (87%), Positives = 82/85 (96%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL+++NKITK+L++EELI++RDEVSKYMIEGDLRRFNAL IRRLKEIQCYRGV
Sbjct: 196 RARQILSDLSMENKITKELSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGV 255
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRV 6
RHIQGLPCRGQ TKNNCRTLKGKRV
Sbjct: 256 RHIQGLPCRGQRTKNNCRTLKGKRV 280
Score = 92.0 bits (227), Expect = 8e-17
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RA QIL DL+L+NK TKDLT EL ++R+EVSKY+I +L R I+RL +IQCYRG
Sbjct: 63 RAHQILIDLSLENKRTKDLTGLELHTLRNEVSKYLIGEELTRCVRSDIQRLADIQCYRGY 122
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKR 9
H LPCRGQ T+ N RT KG R
Sbjct: 123 NHACLLPCRGQLTRTNARTRKGMR 146
>gb|AFK44070.1| unknown [Lotus japonicus]
Length = 164
Score = 154 bits (389), Expect = 1e-35
Identities = 71/86 (82%), Positives = 82/86 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RAR+ILCDLN+ NKITK+L++EELI++RDEVSKYMIEGDLRRFNA I+RLK+IQCYRG+
Sbjct: 72 RARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLRRFNATNIKRLKDIQCYRGI 131
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 132 RHIQGLPCRGQRTKNNCRTLKGKKVA 157
>ref|NP_001236787.1| uncharacterized protein LOC100500355 [Glycine max]
gi|255630109|gb|ACU15408.1| unknown [Glycine max]
Length = 162
Score = 154 bits (388), Expect = 2e-35
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RA+QILCD+ + NKITK+LT+EELI++RDEVSKYMIEGDLRRFNA+ I+RLK+IQCYRG+
Sbjct: 70 RAKQILCDIQMDNKITKELTEEELITLRDEVSKYMIEGDLRRFNAVNIKRLKDIQCYRGI 129
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 130 RHIQGLPCRGQRTKNNCRTLKGKKVA 155
>ref|NP_001237689.1| uncharacterized protein LOC100499902 [Glycine max]
gi|255627531|gb|ACU14110.1| unknown [Glycine max]
Length = 162
Score = 154 bits (388), Expect = 2e-35
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RA+QILCD+ + NKITK+LT+EELI++RDEVSKYMIEGDLRRFNA+ I+RLK+IQCYRG+
Sbjct: 70 RAKQILCDIQMDNKITKELTEEELITLRDEVSKYMIEGDLRRFNAVNIKRLKDIQCYRGI 129
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 130 RHIQGLPCRGQRTKNNCRTLKGKKVA 155
>ref|XP_002306609.2| hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
gi|550339105|gb|EEE93605.2| hypothetical protein
POPTR_0005s16160g [Populus trichocarpa]
Length = 168
Score = 153 bits (387), Expect = 2e-35
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = -1
Query: 257 ARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 78
ARQIL DL ++NKITKDL+++ELI++RDEVSKYMIEGDLRRFNAL IRRLKEIQCYRGVR
Sbjct: 75 ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 77 HIQGLPCRGQHTKNNCRTLKGKRVA 3
HIQGLPCRGQ TKNNCRTLKGKRV+
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVS 159
>gb|AFK45217.1| unknown [Lotus japonicus]
Length = 164
Score = 152 bits (385), Expect = 4e-35
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RAR+ILCDLN+ NKITK+L++EELI++RDEVSKYMIEGDL+RFNA I+RLK+IQCYRG+
Sbjct: 72 RARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLQRFNATNIKRLKDIQCYRGI 131
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRVA 3
RHIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 132 RHIQGLPCRGQRTKNNCRTLKGKKVA 157
>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
Length = 168
Score = 152 bits (385), Expect = 4e-35
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = -1
Query: 260 RARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGV 81
RARQIL DL++QNKITKDL++EELI++RDEVSKYMIEGDLRRFNAL IR LKEIQC+RG+
Sbjct: 74 RARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRGLKEIQCHRGI 133
Query: 80 RHIQGLPCRGQHTKNNCRTLKGKRV 6
RHIQGLPCRGQ TKNNCRTLKGKRV
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKRV 158
>ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
tuberosum]
Length = 168
Score = 152 bits (383), Expect = 6e-35
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = -1
Query: 257 ARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 78
ARQIL DL ++NK+ KD+++EELI++R+EVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR
Sbjct: 75 ARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 134
Query: 77 HIQGLPCRGQHTKNNCRTLKGKRVA 3
HIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKKVA 159
>ref|XP_004238695.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Solanum
lycopersicum]
Length = 168
Score = 152 bits (383), Expect = 6e-35
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = -1
Query: 257 ARQILCDLNLQNKITKDLTDEELISVRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 78
ARQIL DL ++NK+ KD+++EELI++R+EVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR
Sbjct: 75 ARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVR 134
Query: 77 HIQGLPCRGQHTKNNCRTLKGKRVA 3
HIQGLPCRGQ TKNNCRTLKGK+VA
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKKVA 159