BLASTX nr result
ID: Sinomenium22_contig00000856
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00000856
(629 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006858514.1| hypothetical protein AMTR_s00071p00142490 [A... 69 1e-09
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 65 2e-08
ref|XP_006368472.1| RNA helicase family protein [Populus trichoc... 64 4e-08
gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides] 64 4e-08
ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 62 1e-07
ref|XP_006385597.1| RNA helicase family protein [Populus trichoc... 62 1e-07
ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobro... 61 3e-07
ref|XP_006485359.1| PREDICTED: regulator of nonsense transcripts... 58 3e-06
ref|XP_006436834.1| hypothetical protein CICLE_v10031552mg [Citr... 58 3e-06
>ref|XP_006858514.1| hypothetical protein AMTR_s00071p00142490 [Amborella trichopoda]
gi|548862623|gb|ERN19981.1| hypothetical protein
AMTR_s00071p00142490 [Amborella trichopoda]
Length = 1252
Score = 68.6 bits (166), Expect = 1e-09
Identities = 38/74 (51%), Positives = 40/74 (54%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQVGF FG+ GP PLQSQG+MNPLYSQPFTQYNT
Sbjct: 1182 LFTQVGFNDPSQDDSSQTHFGMAGPGPLQSQGVMNPLYSQPFTQYNT---QPLNMQAPQQ 1238
Query: 449 XXXXXXNHKLHYNG 408
N KLHYNG
Sbjct: 1239 QNQSTQNQKLHYNG 1252
>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
product [Vitis vinifera]
Length = 1267
Score = 65.1 bits (157), Expect = 2e-08
Identities = 31/47 (65%), Positives = 31/47 (65%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNT 489
LFTQVGF FGV PNPLQSQGLMNPLYSQPF YNT
Sbjct: 1186 LFTQVGFNDPSQDDASQSHFGVANPNPLQSQGLMNPLYSQPFAHYNT 1232
>ref|XP_006368472.1| RNA helicase family protein [Populus trichocarpa]
gi|550346386|gb|ERP65041.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1256
Score = 63.9 bits (154), Expect = 4e-08
Identities = 34/74 (45%), Positives = 36/74 (48%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQVGF FG+ PN LQSQGLMN LYSQPF YNT
Sbjct: 1183 LFTQVGFNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFAHYNTQPVNLQAPQQQSQ 1242
Query: 449 XXXXXXNHKLHYNG 408
N K+HYNG
Sbjct: 1243 QGQGTQNQKIHYNG 1256
>gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 63.9 bits (154), Expect = 4e-08
Identities = 34/74 (45%), Positives = 36/74 (48%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQVGF FG+ PN LQSQGLMN LYSQPF YNT
Sbjct: 509 LFTQVGFNDPSQDDASQSHFGITNPNQLQSQGLMNSLYSQPFAHYNTQPVNLQAPQQQSQ 568
Query: 449 XXXXXXNHKLHYNG 408
N K+HYNG
Sbjct: 569 QGQGTQNQKIHYNG 582
>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 1280
Score = 62.4 bits (150), Expect = 1e-07
Identities = 34/74 (45%), Positives = 37/74 (50%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQ+GF FG+ PNPLQSQGLMN LYSQPF YNT
Sbjct: 1208 LFTQIGFNDASQDDVSQNHFGIANPNPLQSQGLMNSLYSQPFAHYNT-QPLNMQSTQQPQ 1266
Query: 449 XXXXXXNHKLHYNG 408
N K+HYNG
Sbjct: 1267 QGQGSQNQKIHYNG 1280
>ref|XP_006385597.1| RNA helicase family protein [Populus trichocarpa]
gi|550342726|gb|ERP63394.1| RNA helicase family protein
[Populus trichocarpa]
Length = 1242
Score = 62.0 bits (149), Expect = 1e-07
Identities = 33/74 (44%), Positives = 36/74 (48%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQVG+ FG+ PN LQSQGLMN LYSQPF YNT
Sbjct: 1169 LFTQVGYNDPSQDDASQSHFGIANPNQLQSQGLMNSLYSQPFGHYNTQQLNLQAPQQQPQ 1228
Query: 449 XXXXXXNHKLHYNG 408
N K+HYNG
Sbjct: 1229 QGQGTQNQKIHYNG 1242
>ref|XP_007039605.1| Regulator of nonsense transcripts 1 [Theobroma cacao]
gi|508776850|gb|EOY24106.1| Regulator of nonsense
transcripts 1 [Theobroma cacao]
Length = 1266
Score = 60.8 bits (146), Expect = 3e-07
Identities = 35/75 (46%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQVGF FGV PN LQSQGLMN LYSQPF YNT
Sbjct: 1192 LFTQVGFNDPSQDDASQSHFGVANPNQLQSQGLMNSLYSQPFAHYNTQPLNLQAPQQQQP 1251
Query: 449 XXXXXXNH-KLHYNG 408
+ KLHYNG
Sbjct: 1252 QQGQGSQNQKLHYNG 1266
>ref|XP_006485359.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Citrus
sinensis]
Length = 1274
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/74 (41%), Positives = 35/74 (47%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQ G+ FGVV PN LQ+QG+MN LYSQPF YN+
Sbjct: 1201 LFTQAGYNEPTQDDASQSHFGVVNPNALQTQGMMNSLYSQPFAHYNSQPLNLQSPQQQPQ 1260
Query: 449 XXXXXXNHKLHYNG 408
N K HYNG
Sbjct: 1261 PGQGSQNQKNHYNG 1274
>ref|XP_006436834.1| hypothetical protein CICLE_v10031552mg [Citrus clementina]
gi|557539030|gb|ESR50074.1| hypothetical protein
CICLE_v10031552mg [Citrus clementina]
Length = 440
Score = 57.8 bits (138), Expect = 3e-06
Identities = 31/74 (41%), Positives = 35/74 (47%)
Frame = -1
Query: 629 LFTQVGFXXXXXXXXXXXQFGVVGPNPLQSQGLMNPLYSQPFTQYNTXXXXXXXXXXXXX 450
LFTQ G+ FGVV PN LQ+QG+MN LYSQPF YN+
Sbjct: 367 LFTQAGYNEPTQDDASQSHFGVVNPNALQTQGMMNSLYSQPFAHYNSQPLNLQSPQQQPQ 426
Query: 449 XXXXXXNHKLHYNG 408
N K HYNG
Sbjct: 427 PGQGSQNQKNHYNG 440