BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00000783
         (2941 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB00038.1| reverse transcriptase family member [Glycine max]       59   3e-07
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...    55   6e-06
emb|CCH50976.1| T4.15 [Malus x robusta]                                52   8e-06

>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 58.5 bits (140), Expect(2) = 3e-07
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 2829 VTEMRMLRWICGKTLKDKIRNEHI*EMVGVAPIGDKM 2939
            V EMRMLRW+CGKT +DKIRNE I E VGVAPI +KM
Sbjct: 265  VAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKM 301



 Score = 25.8 bits (55), Expect(2) = 3e-07
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 2743 GKFYKTNIMPIMLNETKCLA 2802
            GKFY+T + P +L  T+C A
Sbjct: 235  GKFYRTAVRPTILYGTECWA 254


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
            gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score = 54.7 bits (130), Expect(2) = 6e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +3

Query: 2829 VTEMRMLRWICGKTLKDKIRNEHI*EMVGVAPIGDKM 2939
            V EMRMLRWICG T +D++RN+ I E VGVAPI +K+
Sbjct: 104  VAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKL 140



 Score = 25.0 bits (53), Expect(2) = 6e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 2743 GKFYKTNIMPIMLNETKC 2796
            GKFY+T I P ML   +C
Sbjct: 74   GKFYRTAIRPAMLYGAEC 91


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 26/37 (70%), Positives = 27/37 (72%)
 Frame = +3

Query: 2829 VTEMRMLRWICGKTLKDKIRNEHI*EMVGVAPIGDKM 2939
            V EMRMLRW+CG T KDKIRNE I   VGVA I  KM
Sbjct: 873  VAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKM 909



 Score = 27.7 bits (60), Expect(2) = 8e-06
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 2743 GKFYKTNIMPIMLNETKCLA 2802
            GKFY+T I P ML  T+C A
Sbjct: 843  GKFYRTAIRPAMLYGTECWA 862