BLASTX nr result
ID: Sinomenium22_contig00000088
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00000088
(622 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g... 188 1e-45
emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera] 188 1e-45
ref|XP_007158770.1| hypothetical protein PHAVU_002G180500g [Phas... 185 8e-45
ref|XP_004486011.1| PREDICTED: KH domain-containing protein At4g... 182 9e-44
ref|XP_004486010.1| PREDICTED: KH domain-containing protein At4g... 182 9e-44
ref|XP_004504558.1| PREDICTED: KH domain-containing protein At4g... 181 2e-43
ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g... 180 3e-43
ref|XP_007211344.1| hypothetical protein PRUPE_ppa002887mg [Prun... 179 6e-43
ref|XP_006449023.1| hypothetical protein CICLE_v10014608mg [Citr... 177 2e-42
ref|XP_006468033.1| PREDICTED: KH domain-containing protein At4g... 177 2e-42
ref|XP_007025040.1| RNA-binding KH domain-containing protein iso... 171 2e-40
ref|XP_007025041.1| RNA-binding KH domain-containing protein iso... 171 2e-40
ref|XP_007025038.1| RNA-binding KH domain-containing protein iso... 171 2e-40
ref|XP_002317286.2| hypothetical protein POPTR_0011s02420g [Popu... 168 1e-39
ref|XP_006355412.1| PREDICTED: KH domain-containing protein At4g... 167 2e-39
ref|XP_006355411.1| PREDICTED: KH domain-containing protein At4g... 167 2e-39
ref|XP_002305041.1| nucleic acid binding family protein [Populus... 167 3e-39
gb|EXB54841.1| KH domain-containing protein [Morus notabilis] 166 5e-39
ref|XP_004244971.1| PREDICTED: KH domain-containing protein At4g... 165 9e-39
ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus ... 163 4e-38
>ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 188 bits (478), Expect = 1e-45
Identities = 95/150 (63%), Positives = 110/150 (73%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKR+RSQ+D DGD K KRR N ++E G ELI+YRILCPDG IGSVIGKSGKVIN
Sbjct: 1 MGETGKRFRSQRDQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR +TRAKIKVVDPFPGA+DRVI IYCY E+++ +PLCPAQDALLK
Sbjct: 61 SIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHA 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+ +SDK+K DKEE ILVP+SQ
Sbjct: 121 AIVNAVASLENSDKKKKDKEECQILVPSSQ 150
>emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 188 bits (478), Expect = 1e-45
Identities = 95/150 (63%), Positives = 110/150 (73%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKR+RSQ+D DGD K KRR N ++E G ELI+YRILCPDG IGSVIGKSGKVIN
Sbjct: 1 MGETGKRFRSQRDQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR +TRAKIKVVDPFPGA+DRVI IYCY E+++ +PLCPAQDALLK
Sbjct: 61 SIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHA 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+ +SDK+K DKEE ILVP+SQ
Sbjct: 121 AIVNAVASLENSDKKKKDKEECQILVPSSQ 150
>ref|XP_007158770.1| hypothetical protein PHAVU_002G180500g [Phaseolus vulgaris]
gi|561032185|gb|ESW30764.1| hypothetical protein
PHAVU_002G180500g [Phaseolus vulgaris]
Length = 626
Score = 185 bits (470), Expect = 8e-45
Identities = 90/150 (60%), Positives = 111/150 (74%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKRY SQ+DYDGD KN KRR N++++ G+ ELI+YRILCPD IGSVIGK+GKVIN
Sbjct: 1 MGETGKRYYSQRDYDGDRKNQKRRVNDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRAK+KVVDPFPGA+DRVI IYCY E+++ +PLC AQDALLK
Sbjct: 61 SIRQETRAKVKVVDPFPGAKDRVITIYCYVKEKEEVEINDEFTSKEPLCAAQDALLKVHV 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GD +K++ D++E ILVP+SQ
Sbjct: 121 AIVNSITALGDPEKKRKDRDECQILVPSSQ 150
>ref|XP_004486011.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
[Cicer arietinum]
Length = 624
Score = 182 bits (461), Expect = 9e-44
Identities = 91/150 (60%), Positives = 108/150 (72%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKRYR ++D DGD+KN KRR N+++E ELI+YRILCPDG IGSVIGK+GKVIN
Sbjct: 1 MGETGKRYRPRRDRDGDSKNQKRRVNDRDERDKGELIVYRILCPDGVIGSVIGKNGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRAK+KVVDPFPGA+ RVI IYCY E N KPLC AQDALLK
Sbjct: 61 SIRQETRAKVKVVDPFPGAKHRVITIYCYVKDKEEIEVDDELDNEKPLCAAQDALLKVHS 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GDS+K++ +K+E ILVP+SQ
Sbjct: 121 AISNSIETIGDSEKKRKNKDECQILVPSSQ 150
>ref|XP_004486010.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Cicer arietinum]
Length = 647
Score = 182 bits (461), Expect = 9e-44
Identities = 91/150 (60%), Positives = 108/150 (72%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKRYR ++D DGD+KN KRR N+++E ELI+YRILCPDG IGSVIGK+GKVIN
Sbjct: 1 MGETGKRYRPRRDRDGDSKNQKRRVNDRDERDKGELIVYRILCPDGVIGSVIGKNGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRAK+KVVDPFPGA+ RVI IYCY E N KPLC AQDALLK
Sbjct: 61 SIRQETRAKVKVVDPFPGAKHRVITIYCYVKDKEEIEVDDELDNEKPLCAAQDALLKVHS 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GDS+K++ +K+E ILVP+SQ
Sbjct: 121 AISNSIETIGDSEKKRKNKDECQILVPSSQ 150
>ref|XP_004504558.1| PREDICTED: KH domain-containing protein At4g18375-like [Cicer
arietinum]
Length = 624
Score = 181 bits (458), Expect = 2e-43
Identities = 90/150 (60%), Positives = 108/150 (72%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKRY SQ+D+DGD KN KRR N+K + + ELI+YRILCP IGSVIGK+GKVIN
Sbjct: 1 MGETGKRYHSQRDHDGDRKNQKRRMNDKNDKSNDELIVYRILCPVEVIGSVIGKNGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRAK+KVVDPFPGA++RVI IYCY E+ + KPLC AQDALLK
Sbjct: 61 SIRQETRAKVKVVDPFPGAKNRVITIYCYVKEKEDIEIDNEFDDRKPLCAAQDALLKVHV 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GDSDK++ D++E ILVP+SQ
Sbjct: 121 AILNSIEALGDSDKKRKDRDECQILVPSSQ 150
>ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 180 bits (456), Expect = 3e-43
Identities = 87/150 (58%), Positives = 110/150 (73%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKRY SQ+D+DGD K+ KRR ++++ G+ ELI+YRILCPD IGSVIGK+GKVIN
Sbjct: 1 MGETGKRYHSQRDHDGDRKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRAK+KVVDPFPG++DRVI IYCY E++ +PLC AQDALLK
Sbjct: 61 SIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKVHV 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GDS+K++ D++E ILVP+SQ
Sbjct: 121 AIANSIAAIGDSEKKRKDRDECQILVPSSQ 150
>ref|XP_007211344.1| hypothetical protein PRUPE_ppa002887mg [Prunus persica]
gi|462407209|gb|EMJ12543.1| hypothetical protein
PRUPE_ppa002887mg [Prunus persica]
Length = 624
Score = 179 bits (454), Expect = 6e-43
Identities = 92/151 (60%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKRYRSQ+D+DG KN KRR N++EE G E+++YRILCPDG IGSVIGKSGKVIN
Sbjct: 1 MGETGKRYRSQRDHDGGNKNQKRRFNDREEKGSDEMVVYRILCPDGVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
+IR +TRAKIKVVDPFPGA+DRVI IY Y E+S+ +PLC AQDALL+
Sbjct: 61 TIRQDTRAKIKVVDPFPGAKDRVINIYSYVKDKEEVEVDDEFSDREPLCAAQDALLRVHT 120
Query: 145 XXXXXXXXVGDSDKRKND-KEEAHILVPTSQ 56
VGDSDK++ D +E+ ILVP+SQ
Sbjct: 121 AISNALASVGDSDKKRRDSREDCQILVPSSQ 151
>ref|XP_006449023.1| hypothetical protein CICLE_v10014608mg [Citrus clementina]
gi|557551634|gb|ESR62263.1| hypothetical protein
CICLE_v10014608mg [Citrus clementina]
Length = 624
Score = 177 bits (450), Expect = 2e-42
Identities = 89/150 (59%), Positives = 108/150 (72%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MG+ GKRYRSQ+D D D KN KRR N K+E G++E +IYRILCPDG IGSVIGKSGKVIN
Sbjct: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRA++KVVDPFPGA+DRVI IY + E+++ +PLC AQDALLK
Sbjct: 61 SIRQETRARVKVVDPFPGAKDRVITIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
D+DK++ +KEE ILVP+SQ
Sbjct: 121 AIANAVANATDNDKKRKEKEECQILVPSSQ 150
>ref|XP_006468033.1| PREDICTED: KH domain-containing protein At4g18375-like [Citrus
sinensis]
Length = 624
Score = 177 bits (449), Expect = 2e-42
Identities = 88/150 (58%), Positives = 108/150 (72%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MG+ GKRYRSQ+D D D KN KRR N K+E G++E +IYRILCPDG IGSVIGKSGKVIN
Sbjct: 1 MGDSGKRYRSQRDNDRDGKNQKRRINEKDEKGNEESVIYRILCPDGVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR ETRA++KVVDPFPGA+DRV+ IY + E+++ +PLC AQDALLK
Sbjct: 61 SIRQETRARVKVVDPFPGAKDRVVTIYSHVKDKEDVEVDDEFNDKEPLCAAQDALLKVHA 120
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
D+DK++ +KEE ILVP+SQ
Sbjct: 121 AIANAVANATDNDKKRKEKEECQILVPSSQ 150
>ref|XP_007025040.1| RNA-binding KH domain-containing protein isoform 3 [Theobroma
cacao] gi|508780406|gb|EOY27662.1| RNA-binding KH
domain-containing protein isoform 3 [Theobroma cacao]
Length = 550
Score = 171 bits (433), Expect = 2e-40
Identities = 86/153 (56%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Frame = -1
Query: 508 SMGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVI 329
+MGE KR+R Q+D DGD++N KRR N+K E + EL++YRILCPD IGSVIGKSGKVI
Sbjct: 11 TMGESAKRHRGQRDNDGDSRNQKRRLNDKNEKNNDELVVYRILCPDVVIGSVIGKSGKVI 70
Query: 328 NSIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXX 149
N IR ETRAK+KVVDP+PGA+DRVI IYCY E+++ +PLC AQDALL+
Sbjct: 71 NLIRQETRAKVKVVDPYPGAKDRVITIYCYVKDKEEVEVDDEFNDKEPLCAAQDALLRVH 130
Query: 148 XXXXXXXXXVGDSDKRKNDK--EEAHILVPTSQ 56
+GDSD+++ D+ EE ILVP+SQ
Sbjct: 131 AAIANAVALIGDSDQKRTDRYGEECQILVPSSQ 163
>ref|XP_007025041.1| RNA-binding KH domain-containing protein isoform 4, partial
[Theobroma cacao] gi|508780407|gb|EOY27663.1|
RNA-binding KH domain-containing protein isoform 4,
partial [Theobroma cacao]
Length = 617
Score = 171 bits (432), Expect = 2e-40
Identities = 86/152 (56%), Positives = 108/152 (71%), Gaps = 2/152 (1%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE KR+R Q+D DGD++N KRR N+K E + EL++YRILCPD IGSVIGKSGKVIN
Sbjct: 1 MGESAKRHRGQRDNDGDSRNQKRRLNDKNEKNNDELVVYRILCPDVVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
IR ETRAK+KVVDP+PGA+DRVI IYCY E+++ +PLC AQDALL+
Sbjct: 61 LIRQETRAKVKVVDPYPGAKDRVITIYCYVKDKEEVEVDDEFNDKEPLCAAQDALLRVHA 120
Query: 145 XXXXXXXXVGDSDKRKNDK--EEAHILVPTSQ 56
+GDSD+++ D+ EE ILVP+SQ
Sbjct: 121 AIANAVALIGDSDQKRTDRYGEECQILVPSSQ 152
>ref|XP_007025038.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
cacao] gi|590622397|ref|XP_007025039.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508780404|gb|EOY27660.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508780405|gb|EOY27661.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 628
Score = 171 bits (432), Expect = 2e-40
Identities = 86/152 (56%), Positives = 108/152 (71%), Gaps = 2/152 (1%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE KR+R Q+D DGD++N KRR N+K E + EL++YRILCPD IGSVIGKSGKVIN
Sbjct: 1 MGESAKRHRGQRDNDGDSRNQKRRLNDKNEKNNDELVVYRILCPDVVIGSVIGKSGKVIN 60
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
IR ETRAK+KVVDP+PGA+DRVI IYCY E+++ +PLC AQDALL+
Sbjct: 61 LIRQETRAKVKVVDPYPGAKDRVITIYCYVKDKEEVEVDDEFNDKEPLCAAQDALLRVHA 120
Query: 145 XXXXXXXXVGDSDKRKNDK--EEAHILVPTSQ 56
+GDSD+++ D+ EE ILVP+SQ
Sbjct: 121 AIANAVALIGDSDQKRTDRYGEECQILVPSSQ 152
>ref|XP_002317286.2| hypothetical protein POPTR_0011s02420g [Populus trichocarpa]
gi|550327430|gb|EEE97898.2| hypothetical protein
POPTR_0011s02420g [Populus trichocarpa]
Length = 624
Score = 168 bits (425), Expect = 1e-39
Identities = 87/150 (58%), Positives = 104/150 (69%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
M E GKR R Q+DYDGD N KR ++K D LI+YRILCPDG IGSVIGKSGKVIN
Sbjct: 1 MVESGKRSRPQRDYDGDTNNQKRHKDDKGTNNDG-LIVYRILCPDGVIGSVIGKSGKVIN 59
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR+E+RA++KVVDPFPGA+DR+I IYC+ +++++ PLC AQDALLK
Sbjct: 60 SIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKVHA 119
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GDSDKR DKEE ILVP SQ
Sbjct: 120 AISNAVASLGDSDKRLRDKEECQILVPASQ 149
>ref|XP_006355412.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
[Solanum tuberosum]
Length = 590
Score = 167 bits (423), Expect = 2e-39
Identities = 87/150 (58%), Positives = 106/150 (70%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKR R DGD KN KRRT+ ++E D ELI+YRILCP+ IGSVIGK+GKVIN
Sbjct: 1 MGETGKRSRRD---DGDNKNQKRRTD-RDEKSDDELIVYRILCPNNVIGSVIGKNGKVIN 56
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR+ET+AK+KVVDPFPGA+DRVI+IYCY E++ KPLC AQDALLK
Sbjct: 57 SIRSETKAKVKVVDPFPGAKDRVILIYCYVKEKEDVEVDQEFNEKKPLCTAQDALLKVYT 116
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+G+SDK++ DKEE +L P+SQ
Sbjct: 117 AIANALAAIGESDKKRKDKEECQLLAPSSQ 146
>ref|XP_006355411.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum]
Length = 620
Score = 167 bits (423), Expect = 2e-39
Identities = 87/150 (58%), Positives = 106/150 (70%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKR R DGD KN KRRT+ ++E D ELI+YRILCP+ IGSVIGK+GKVIN
Sbjct: 1 MGETGKRSRRD---DGDNKNQKRRTD-RDEKSDDELIVYRILCPNNVIGSVIGKNGKVIN 56
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR+ET+AK+KVVDPFPGA+DRVI+IYCY E++ KPLC AQDALLK
Sbjct: 57 SIRSETKAKVKVVDPFPGAKDRVILIYCYVKEKEDVEVDQEFNEKKPLCTAQDALLKVYT 116
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+G+SDK++ DKEE +L P+SQ
Sbjct: 117 AIANALAAIGESDKKRKDKEECQLLAPSSQ 146
>ref|XP_002305041.1| nucleic acid binding family protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| nucleic acid binding family
protein [Populus trichocarpa]
Length = 623
Score = 167 bits (422), Expect = 3e-39
Identities = 89/150 (59%), Positives = 101/150 (67%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
M E GKR R Q+DYDGD N KR +NK D EL++YRILCPD IGSVIGKSGKVIN
Sbjct: 1 MVESGKRSRPQRDYDGDTNNQKRHKDNKGTDND-ELVVYRILCPDEVIGSVIGKSGKVIN 59
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIRNE+RA++KVVDPFPGA RVI IYC ++ + PLCPAQDALLK
Sbjct: 60 SIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALLKVHA 119
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+GDSDKR DK+E ILVPTSQ
Sbjct: 120 AISNAVAALGDSDKRCRDKKECQILVPTSQ 149
>gb|EXB54841.1| KH domain-containing protein [Morus notabilis]
Length = 633
Score = 166 bits (420), Expect = 5e-39
Identities = 92/159 (57%), Positives = 109/159 (68%), Gaps = 9/159 (5%)
Frame = -1
Query: 505 MGEIGKRYRSQKDY-DGDAKNPKRRTNN-KEEAGDQELIIYRILCPDGFIGSVIGKSGKV 332
MGE GKR+R Q+D+ DG+ KN +RRT++ ++E QELI+YRILCP G IGSVIGKSGKV
Sbjct: 1 MGETGKRFRLQRDHHDGEGKNQRRRTSDSRDERQSQELIVYRILCPVGVIGSVIGKSGKV 60
Query: 331 INSIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKX 152
INSIR ETRAKIKVVDPFPGA RV+ IYCY E+S +PLC AQDALLK
Sbjct: 61 INSIRQETRAKIKVVDPFPGANHRVLTIYCYVREKDEVEIEDEFSERRPLCAAQDALLKV 120
Query: 151 XXXXXXXXXXVGDSDKRKNDK-------EEAHILVPTSQ 56
VGDSD+++ D+ EE ILVPTSQ
Sbjct: 121 HVAIANAVATVGDSDRKRRDRDRDKDKAEECQILVPTSQ 159
>ref|XP_004244971.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 617
Score = 165 bits (418), Expect = 9e-39
Identities = 84/150 (56%), Positives = 106/150 (70%)
Frame = -1
Query: 505 MGEIGKRYRSQKDYDGDAKNPKRRTNNKEEAGDQELIIYRILCPDGFIGSVIGKSGKVIN 326
MGE GKR R DGD KN KRRT+ ++E D ELI+YRILCP+ IGSVIGK+GKVIN
Sbjct: 1 MGETGKRSRRD---DGDNKNQKRRTD-RDEKNDDELIVYRILCPNNVIGSVIGKNGKVIN 56
Query: 325 SIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKXXX 146
SIR+ET+AK+KVVDPFPGA+DRVI++YCY +++ +PLC AQDALLK
Sbjct: 57 SIRSETKAKVKVVDPFPGAKDRVILVYCYVKEKEDVEVDQDFNEKQPLCTAQDALLKVYT 116
Query: 145 XXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
+G+SDK++ DKEE +L P+SQ
Sbjct: 117 AIANALAAIGESDKKRKDKEECQLLAPSSQ 146
>ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 462
Score = 163 bits (412), Expect = 4e-38
Identities = 89/152 (58%), Positives = 104/152 (68%), Gaps = 2/152 (1%)
Frame = -1
Query: 505 MGEIGKRYRSQKDY-DGDAKNPKRRTNNKEEAGDQ-ELIIYRILCPDGFIGSVIGKSGKV 332
MGE GKR R Q+D+ DGD KN KRR N+K+E G+ EL+ YRILCPD IGSVIGK+GKV
Sbjct: 1 MGEGGKRNRLQRDHHDGDNKNQKRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKV 60
Query: 331 INSIRNETRAKIKVVDPFPGARDRVIIIYCYXXXXXXXXXXXEYSNSKPLCPAQDALLKX 152
INSIR ETRAK+KVVDPFPG DRVI IYCY E+ + +P C AQDALL+
Sbjct: 61 INSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLRV 120
Query: 151 XXXXXXXXXXVGDSDKRKNDKEEAHILVPTSQ 56
V DSD++ DKEE ILVP+SQ
Sbjct: 121 HSAISNAVSSVLDSDRKMKDKEECRILVPSSQ 152