BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00051933
         (391 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    62   2e-15
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    64   2e-14
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    61   6e-14
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678...    60   1e-12
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...    59   2e-12
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    55   3e-12
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    57   3e-12
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    56   4e-12
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                62   4e-12
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 54   4e-12
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            50   4e-12
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    62   5e-12
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    57   2e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                56   2e-11
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    53   2e-11
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    54   3e-11
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    54   1e-10
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    50   1e-10
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              71   2e-10
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        48   3e-10

>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 62.4 bits (150), Expect(2) = 2e-15
 Identities = 24/59 (40%), Positives = 41/59 (69%)
 Frame = +3

Query: 3   KIARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDH 179
           +I +PK+EGGL +++ ++ NK S LKL+W++ S QDS+W++W     +K E  W++  H
Sbjct: 585 EICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTH 643



 Score = 45.4 bits (106), Expect(2) = 2e-15
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +W++LLKH  +A S  +   N G  TSFW+DNW  KG L  +      +  G+ +   + 
Sbjct: 650 IWRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGPLINLTGARGAIDMGISRHMTL- 708

Query: 368 QYLSAEGW 391
               AE W
Sbjct: 709 ----AEAW 712


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 63.9 bits (154), Expect(2) = 2e-14
 Identities = 24/58 (41%), Positives = 40/58 (68%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDH 179
           + +PK+EGGL +R+ K+ N  S LKL+W+I S  DS+W++W+H   +K    W V+++
Sbjct: 247 VCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVREN 304



 Score = 40.4 bits (93), Expect(2) = 2e-14
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKK+LK    A  L ++  N G  T FWYDNW   G L  I      +  G++K + ++
Sbjct: 311 MWKKVLKFRDAAIQLCKAEVNNGAHTFFWYDNWSDMGRLIDIAGDRGVIDMGIKKHATMA 370


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 61.2 bits (147), Expect(2) = 6e-14
 Identities = 26/61 (42%), Positives = 41/61 (67%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHPN 185
           I +PK+EGGL +R+  + N  S+LKL+W++TS  DS+W++W     +K E  W++   PN
Sbjct: 270 ICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLT--PN 327

Query: 186 S 188
           S
Sbjct: 328 S 328



 Score = 41.6 bits (96), Expect(2) = 6e-14
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKK+LK+   A    R   N G  TSFW+DNW   G L  +     ++  G+ +   V 
Sbjct: 334 MWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHLMDVTGQRGQIDLGISRNKTV- 392

Query: 368 QYLSAEGW 391
               AE W
Sbjct: 393 ----AEAW 396


>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
           putative protein [Arabidopsis thaliana]
          Length = 473

 Score = 60.1 bits (144), Expect(2) = 1e-12
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDH 179
           + +PKEEGGL +R+ K+ N    LKL+W+I S  DS+W++W+    +K    W V+++
Sbjct: 114 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVSFWAVREN 171



 Score = 38.5 bits (88), Expect(2) = 1e-12
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKV 364
           +W+K+LK   +A +L +   N G  TSFWYD+W   G L         +  G+ K + V
Sbjct: 178 MWRKILKFRDIARTLCKVEINNGARTSFWYDDWSDLGRLIDSAGDRGAIDLGINKHATV 236


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score = 59.3 bits (142), Expect(2) = 2e-12
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDH 179
           + +PKEEGGL +R+ K+ N    LKL+W+I S  DS+W++W+    +K    W V+++
Sbjct: 195 VCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVREN 252



 Score = 38.1 bits (87), Expect(2) = 2e-12
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKV 364
           +W+K+LK   +A +L +   N G  TSFWYD+W   G L         +  G+ K + V
Sbjct: 259 MWRKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLGRLIESAGDRGAIDLGINKHATV 317


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 55.5 bits (132), Expect(2) = 3e-12
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHPN 185
           I +PK+ GGL +R+  + N  S+LKL+W++TS  DS+W++W     +K E  W+++  PN
Sbjct: 782 ICKPKQ-GGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLK--PN 838

Query: 186 S 188
           S
Sbjct: 839 S 839



 Score = 41.6 bits (96), Expect(2) = 3e-12
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 194  VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
            +WKK+LK+   A    R   N G  TSFW+DNW   G L  +     ++  G+ +   V 
Sbjct: 845  MWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHLMDVTGQRGQIDLGISRNKTV- 903

Query: 368  QYLSAEGW 391
                AE W
Sbjct: 904  ----AEAW 907


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 57.4 bits (137), Expect(2) = 3e-12
 Identities = 22/63 (34%), Positives = 37/63 (58%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHPN 185
           + RPK EGGL +++ K+ N    LKL+W+I S+ DS+W++W+    +K    W+ +    
Sbjct: 383 VCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQ 442

Query: 186 SLW 194
             W
Sbjct: 443 GSW 445



 Score = 39.7 bits (91), Expect(2) = 3e-12
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKKLLK+   A +  +     G   SFWYD+W  KG L  ++    +   G+ K   + 
Sbjct: 446 MWKKLLKYRDTAKAFSKVDIRNGETASFWYDDWSSKGRLIDVLGERGQFDMGISKFKTL- 504

Query: 368 QYLSAEGW 391
               AE W
Sbjct: 505 ----AEAW 508


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 56.2 bits (134), Expect(2) = 4e-12
 Identities = 22/56 (39%), Positives = 36/56 (64%)
 Frame = +3

Query: 6    IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQ 173
            + +PK+EGGL +R+ K+ N    LKL+WKI S  +S+W++WV    ++    W V+
Sbjct: 865  VCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVK 920



 Score = 40.4 bits (93), Expect(2) = 4e-12
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +2

Query: 194  VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVL 304
            +WKKLLK+  +A +L +     G  TSFWYDNW   G L
Sbjct: 929  IWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQL 967


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 61.6 bits (148), Expect(2) = 4e-12
 Identities = 25/61 (40%), Positives = 40/61 (65%)
 Frame = +3

Query: 3   KIARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHP 182
           ++ +PK EGGL +R+ K+ N    LKL+W+I S  DS+W++WV    +K E  W V+++ 
Sbjct: 417 QVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENA 476

Query: 183 N 185
           N
Sbjct: 477 N 477



 Score = 35.0 bits (79), Expect(2) = 4e-12
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKK+LK+  +A    ++    G  TSFW+D+W   G L  +      +  G+ +   V+
Sbjct: 482 IWKKILKYRGVAKRFCKAEVGNGESTSFWFDDWSLLGRLIDVAGIRGTIDMGISRTMSVA 541


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 53.5 bits (127), Expect(2) = 4e-12
 Identities = 21/57 (36%), Positives = 36/57 (63%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQD 176
           + + K+EGGL I++  + NK S LKL+W++ S+Q S+W+ WV    ++    W+  D
Sbjct: 438 LCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSAND 494



 Score = 43.1 bits (100), Expect(2) = 4e-12
 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSL--IRSISNQGTSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKKLLK+  +A S+  +   S   TSFWYDNW   G L  +      +  G+   + V+
Sbjct: 502 MWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGIPLAATVA 561

Query: 368 QYLSA 382
             L++
Sbjct: 562 TVLAS 566


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 50.4 bits (119), Expect(2) = 4e-12
 Identities = 21/55 (38%), Positives = 37/55 (67%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTV 170
           +  PK+EGGL IR+ K+ NK S+LKL+W++ S   S+W++W+    ++    W++
Sbjct: 121 VCTPKDEGGLGIRSLKEANKVSLLKLIWRMLS-STSLWVQWLRLYLLRKGSFWSI 174



 Score = 46.2 bits (108), Expect(2) = 4e-12
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKK+LKH  LA+  ++   + G  TSFW+DNW   G L  +  H   +  G+   + V+
Sbjct: 184 MWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVA 243

Query: 368 Q 370
           +
Sbjct: 244 E 244


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score = 62.0 bits (149), Expect(2) = 5e-12
 Identities = 23/59 (38%), Positives = 44/59 (74%)
 Frame = +3

Query: 3    KIARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDH 179
            ++ + KEEGGL ++  K+ N+ S+LKL+W+I S +DS+W++WV+   ++ E  W+V+++
Sbjct: 1011 EVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKEN 1069



 Score = 34.3 bits (77), Expect(2) = 5e-12
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +2

Query: 194  VWKKLLKHHPLATSLIRSISNQGT--SFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
            +W+K+LK    A    R     GT  SFW+D+W P G L+  +     +  G+   + V+
Sbjct: 1076 LWRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCPLGRLHQHMGSRGTIDLGIPNNATVA 1135

Query: 368  QYLS 379
            + ++
Sbjct: 1136 EVMN 1139


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 977

 Score = 57.0 bits (136), Expect(2) = 2e-11
 Identities = 22/58 (37%), Positives = 39/58 (67%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDH 179
           + +PK+EGGL +R+ K+ N    LK++WKI S  +S+W++W+    +K E  W V+++
Sbjct: 822 VCKPKKEGGLGLRSLKEANDVCCLKVVWKIVSHGNSLWVKWIEKFLLKNETFWFVKEN 879



 Score = 37.4 bits (85), Expect(2) = 2e-11
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +2

Query: 194  VWKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKV 364
            +W+KL+K    A +  +   N+G  TSFWYD+W   G +   +     +  G+Q++  V
Sbjct: 886  MWRKLIKFREKAKNFCKVEVNKGNCTSFWYDDWSNMGQMVEKVGDRGMIDMGIQRQMTV 944


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 22/56 (39%), Positives = 37/56 (66%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQ 173
           + +PK EGGL +RN K+ N  S LKL+W+I S  +S+W +WV    ++ +  W+++
Sbjct: 512 VCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLK 567



 Score = 38.1 bits (87), Expect(2) = 2e-11
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIR-SISN-QGTSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +W+K+LK   +A S  R  + N +  SFWYD+W   G L   +     +  G+ +E+ V+
Sbjct: 576 IWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGIPREASVA 635


>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
           hypothetical protein At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQD 176
           +  PK EGGL +R  ++ NK  +LKL+W+I S + S+W+ WV    ++    W V++
Sbjct: 24  VCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAKGSLWVDWVKKHLLRGGSLWAVKE 80



 Score = 41.6 bits (96), Expect(2) = 2e-11
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSL--IRSISNQGTSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +WKKLLK+   A     +   + + TSFWYD+W   G LY        +  G+ K+S +S
Sbjct: 88  IWKKLLKYRDKAKCFHKVDVRNGESTSFWYDSWSSLGCLYDKFGERGCIDMGIPKDSTLS 147


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 53.5 bits (127), Expect(2) = 3e-11
 Identities = 24/71 (33%), Positives = 38/71 (53%)
 Frame = +3

Query: 6    IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHPN 185
            I +PK+EGGL I++  + NK S LKL+W++ S Q S+W+ W+          WT      
Sbjct: 1162 ICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWI----------WTFIIRKG 1211

Query: 186  SLWCGRNCSNI 218
            + W     S++
Sbjct: 1212 TFWSANERSSL 1222



 Score = 40.0 bits (92), Expect(2) = 3e-11
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 194  VWKKLLKHHPLATSL--IRSISNQGTSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
            +WKKLLK+  LA S+  +   +   TSFWYD+W   G L  I      +  G+  E+ + 
Sbjct: 1226 MWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLLDITGTRRVIDLGIPLETNLE 1285

Query: 368  QYL 376
              L
Sbjct: 1286 TVL 1288


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 53.5 bits (127), Expect(2) = 1e-10
 Identities = 21/57 (36%), Positives = 36/57 (63%)
 Frame = +3

Query: 6    IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQD 176
            + + K+EGGL I++  + NK S LKL+W++ S+Q S+W+ WV    ++    W+  D
Sbjct: 1007 LCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSAND 1063



 Score = 38.1 bits (87), Expect(2) = 1e-10
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +2

Query: 194  VWKKLLKHHPLATSL--IRSISNQGTSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
            +WKKLL +  +A S+  +   S   TSFWYDNW     L  +      +  G+   + V+
Sbjct: 1071 MWKKLLNYRDVAKSMCKVEIKSGSSTSFWYDNWSQLRQLVDVTNARRTIDMGIPLAATVA 1130

Query: 368  QYLSA 382
              L++
Sbjct: 1131 TVLAS 1135


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 49.7 bits (117), Expect(2) = 1e-10
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQD 176
           +  PKEEGGL +R+  + NK   LKL+W++ S   S+W++W+    ++    W+++D
Sbjct: 85  VCMPKEEGGLGLRSLTEANKVCCLKLIWRLLS-SSSLWVQWLRQYVIRKGSFWSLRD 140



 Score = 41.6 bits (96), Expect(2) = 1e-10
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +2

Query: 194 VWKKLLKHHPLATSLIR-SISN-QGTSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVS 367
           +W+KLLK+  LA+   +  I N +G SFW+DNW P G L  I      +  G+   + V+
Sbjct: 148 MWRKLLKYRHLASGFTQYEIRNGKGVSFWHDNWSPLGPLIAISGTRGCIDMGIDIHATVA 207

Query: 368 QYLS 379
           + L+
Sbjct: 208 EALT 211


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = +3

Query: 6   IARPKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHPN 185
           + +PK+EGGL +R+ K+MN+ S LKL+W+I S  +S+W+RW+    +K +  W+VQ   N
Sbjct: 392 VCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQTTTN 451

Query: 186 S---LWCGRN 206
               LW GRN
Sbjct: 452 MDSVLWRGRN 461


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 47.8 bits (112), Expect(2) = 3e-10
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +3

Query: 15   PKEEGGLNIRNPKDMNKASILKLMWKITSKQDSIWIRWVHGRYVK*ERKWTVQDHPNSLW 194
            PK EGGL +R   + NK   ++L+W++   +DS+W  W H  ++     W V+   +  W
Sbjct: 861  PKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSW 920



 Score = 42.4 bits (98), Expect(2) = 3e-10
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 197  WKKLLKHHPLATSLIRSISNQG--TSFWYDNWHPKGVLYGIIPHLIRLSSGVQKESKVSQ 370
            WK+LL   PLA   +      G    +WYDNW   G L+ II  +   S  V   +KV+ 
Sbjct: 922  WKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTSLGPLFRIIGDIGPSSLRVPLLAKVAS 981

Query: 371  YLSAEGW 391
              S +GW
Sbjct: 982  AFSEDGW 988