BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00051885
         (394 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, part...    65   4e-19
ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citr...    64   1e-18
ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobrom...    50   3e-10
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot...    51   7e-10
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom...    51   7e-10
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     48   2e-08
ref|XP_007202968.1| hypothetical protein PRUPE_ppa018352mg, part...    52   4e-08
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    44   6e-08
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...    44   6e-08
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    47   1e-07
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    52   2e-07
emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]    46   4e-07
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]       44   8e-07
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz...    39   2e-06
ref|XP_007209839.1| hypothetical protein PRUPE_ppa014574mg [Prun...    52   2e-06
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...    38   4e-06

>ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]
           gi|557544680|gb|ESR55658.1| hypothetical protein
           CICLE_v10023471mg, partial [Citrus clementina]
          Length = 185

 Score = 65.5 bits (158), Expect(3) = 4e-19
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KS+SNRLYLKE+FHTL M EGT I DHLSVLN  VSEL+AI +K
Sbjct: 76  KSISNRLYLKEQFHTLRMAEGTKISDHLSVLNGIVSELEAIGVK 119



 Score = 45.4 bits (106), Expect(3) = 4e-19
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           K E++D ALRL+ SLP SYK++ PTLM+GKE V
Sbjct: 119 KIEDDDKALRLLWSLPTSYKHMLPTLMYGKEIV 151



 Score = 29.3 bits (64), Expect(3) = 4e-19
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 163 DLEEVTSVLLSKKKIMKGTGNDSSEGSVVTLCG 65
           DLEEVTS LLS+++ + G   ++ + S + + G
Sbjct: 152 DLEEVTSTLLSEERRLSGESTETIDVSTLAVVG 184


>ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
           gi|557534133|gb|ESR45251.1| hypothetical protein
           CICLE_v10003098mg [Citrus clementina]
          Length = 182

 Score = 63.9 bits (154), Expect(3) = 1e-18
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KS+SNRLYLKE+FHTL M EGT I DHLSVLN  V EL+AI +K
Sbjct: 73  KSISNRLYLKERFHTLRMTEGTKIFDHLSVLNGIVLELEAIGVK 116



 Score = 47.0 bits (110), Expect(3) = 1e-18
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           K E+ D ALRL+ SLP SYK+L PTLM+GKETV
Sbjct: 116 KIEDGDKALRLLWSLPTSYKHLLPTLMYGKETV 148



 Score = 27.3 bits (59), Expect(3) = 1e-18
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = -1

Query: 163 DLEEVTSVLLSKKKIMKGTGNDSSEGSVVTLCG 65
           +LEEVT+ LLS+++ + G   ++++ S + + G
Sbjct: 149 NLEEVTNTLLSEERRLSGESTETTDVSALAVVG 181


>ref|XP_007016583.1| Uncharacterized protein TCM_041944 [Theobroma cacao]
           gi|508786946|gb|EOY34202.1| Uncharacterized protein
           TCM_041944 [Theobroma cacao]
          Length = 698

 Score = 50.4 bits (119), Expect(2) = 3e-10
 Identities = 22/44 (50%), Positives = 32/44 (72%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL NRLY+K++ +TL M EGTS+  H+   NR + +LK I++K
Sbjct: 97  KSLMNRLYIKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVK 140



 Score = 39.7 bits (91), Expect(2) = 3e-10
 Identities = 18/38 (47%), Positives = 28/38 (73%)
 Frame = -2

Query: 273 N*NKKTEEEDVALRLI*SLPPSYKYLKPTLMHGKETVT 160
           N + K E+ED+AL L+ SLPPSY+    T+++G++T T
Sbjct: 136 NIDVKIEDEDLALILLCSLPPSYENFMDTMLYGRDTFT 173


>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
           gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
           superfamily protein [Theobroma cacao]
          Length = 1029

 Score = 51.2 bits (121), Expect(2) = 7e-10
 Identities = 22/44 (50%), Positives = 33/44 (75%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+NRLY+K++ +TL M EGTS+  H+   NR + +LK I++K
Sbjct: 219 KSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVK 262



 Score = 37.7 bits (86), Expect(2) = 7e-10
 Identities = 17/38 (44%), Positives = 28/38 (73%)
 Frame = -2

Query: 273 N*NKKTEEEDVALRLI*SLPPSYKYLKPTLMHGKETVT 160
           N + K E+ED+AL L+  LPPSY+    T+++G++T+T
Sbjct: 258 NIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLT 295


>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
           gi|508717229|gb|EOY09126.1| Uncharacterized protein
           TCM_024518 [Theobroma cacao]
          Length = 277

 Score = 51.2 bits (121), Expect(2) = 7e-10
 Identities = 22/44 (50%), Positives = 33/44 (75%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+NRLY+K++ +TL M EGTS+  H+   NR + +LK I++K
Sbjct: 97  KSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFNRVILDLKNIDVK 140



 Score = 37.7 bits (86), Expect(2) = 7e-10
 Identities = 17/38 (44%), Positives = 28/38 (73%)
 Frame = -2

Query: 273 N*NKKTEEEDVALRLI*SLPPSYKYLKPTLMHGKETVT 160
           N + K E+ED+AL L+  LPPSY+    T+++G++T+T
Sbjct: 136 NIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLT 173


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 47.8 bits (112), Expect(2) = 2e-08
 Identities = 20/44 (45%), Positives = 35/44 (79%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           K+L+N+LYLK++ +TL M+EGT+ + HL+VLN  +++L  + +K
Sbjct: 96  KTLTNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVK 139



 Score = 36.6 bits (83), Expect(2) = 2e-08
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 276 SN*NKKTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           +N   K EEED  + L+ SLP SY  L  T++HGK+++
Sbjct: 134 ANLGVKIEEEDKRIVLLNSLPSSYDTLSTTILHGKDSI 171


>ref|XP_007202968.1| hypothetical protein PRUPE_ppa018352mg, partial [Prunus persica]
           gi|462398499|gb|EMJ04167.1| hypothetical protein
           PRUPE_ppa018352mg, partial [Prunus persica]
          Length = 199

 Score = 52.0 bits (123), Expect(2) = 4e-08
 Identities = 24/47 (51%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAI-EIKKL 255
           KSLSN+L+LKE+ H+L +EEG S+++H+S  NR +++L+ + EI KL
Sbjct: 42  KSLSNKLFLKEELHSLKIEEGASVMEHMSAFNRCIADLQRLDEIYKL 88



 Score = 31.2 bits (69), Expect(2) = 4e-08
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -2

Query: 249 EDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           ED  + L+ S+PPSYK+ + TLM  K T+
Sbjct: 89  EDNVVMLLTSMPPSYKHFRMTLMFDKGTL 117


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 43.5 bits (101), Expect(2) = 6e-08
 Identities = 18/44 (40%), Positives = 32/44 (72%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           K+L+N+LYLK++ + L M EGT+ + HL+V N  +++L  + +K
Sbjct: 95  KTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVK 138



 Score = 38.9 bits (89), Expect(2) = 6e-08
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -2

Query: 276 SN*NKKTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           +N   K EEED A+ L+ SLP SY  L  T++HGK T+
Sbjct: 133 ANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTI 170


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score = 44.3 bits (103), Expect(2) = 6e-08
 Identities = 19/33 (57%), Positives = 28/33 (84%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           K ++ED+A+ L+ SLPPSY+++  TLMHGK+TV
Sbjct: 139 KLDDEDMAIILLCSLPPSYEHVVTTLMHGKDTV 171



 Score = 38.1 bits (87), Expect(2) = 6e-08
 Identities = 16/44 (36%), Positives = 31/44 (70%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+++LYLK++ + L M+E + +  H+ V N+ V +L  +++K
Sbjct: 96  KSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVK 139


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+NRLY K + HTL M EG  + DHL+  NR + +L  + +K
Sbjct: 95  KSLTNRLYQKRQLHTLKMSEGMQVRDHLNNFNRIILDLNGVGVK 138



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 15/34 (44%), Positives = 25/34 (73%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETVT 160
           K EEED A+ L+ SLP SY+    T+M+G+++++
Sbjct: 138 KVEEEDQAMILLCSLPSSYENFVDTMMYGRBSIS 171


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 23/44 (52%), Positives = 33/44 (75%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL NRLYLK++ HTL M+E  SI DH +  N+T+ +L+ I++K
Sbjct: 49  KSLKNRLYLKKRLHTLQMKESMSIKDHFNEFNKTIXDLRNIDVK 92



 Score = 28.1 bits (61), Expect(2) = 2e-07
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -2

Query: 273 N*NKKTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           N + K   ED A+ L+ SLP SY++    +M+G+ T+
Sbjct: 88  NIDVKVNYEDQAIFLMCSLPNSYEHFVDIMMYGRGTL 124


>emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]
          Length = 836

 Score = 46.2 bits (108), Expect(2) = 4e-07
 Identities = 22/44 (50%), Positives = 33/44 (75%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+NRLYLK++ HTL M++  SI D L   N+T+ +L+ I+I+
Sbjct: 546 KSLTNRLYLKKRLHTLHMKKFMSIKDLLDEFNKTIMDLRNIDIR 589



 Score = 33.5 bits (75), Expect(2) = 4e-07
 Identities = 14/34 (41%), Positives = 25/34 (73%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETVT 160
           + ++ED A+ LI SLP SY +   T+M+G++T++
Sbjct: 589 RIDDEDQAMTLISSLPNSYGHFVDTMMYGRDTLS 622


>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
          Length = 289

 Score = 43.9 bits (102), Expect(2) = 8e-07
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+NRL LK++ +TL M EGT I  H+   N  ++ L  I++K
Sbjct: 88  KSLTNRLLLKQRLYTLWMSEGTPIKSHIGEFNSVITYLSKIDVK 131



 Score = 34.7 bits (78), Expect(2) = 8e-07
 Identities = 14/33 (42%), Positives = 25/33 (75%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           K  +ED AL L+ SL PSYK+ + T+++G++++
Sbjct: 131 KINDEDQALLLLCSLLPSYKHFRDTMIYGRDSI 163


>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
           Group] gi|108706491|gb|ABF94286.1| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 556

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 17/33 (51%), Positives = 26/33 (78%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           K ++ED A+ L+ SLPPS++++  TL HGK+TV
Sbjct: 270 KLDDEDKAIILLCSLPPSFEHVVTTLTHGKDTV 302



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 16/44 (36%), Positives = 31/44 (70%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+++LYLK++ + L M+E + +  H+ V N+ V +L  +++K
Sbjct: 227 KSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVK 270


>ref|XP_007209839.1| hypothetical protein PRUPE_ppa014574mg [Prunus persica]
           gi|462405574|gb|EMJ11038.1| hypothetical protein
           PRUPE_ppa014574mg [Prunus persica]
          Length = 157

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAI-EIKKLRKR 246
           KSLSN+L+LKE+ H+L MEEG S+++H+S  NR ++ L+ + E+ KL  +
Sbjct: 69  KSLSNKLFLKEELHSLKMEEGASLMEHVSTFNRCIANLQRMDEVYKLEDK 118



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 249 EDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           ED A+  +  LP SYK+ + TLM  K T+
Sbjct: 116 EDKAVIFLTFLPLSYKHFRMTLMFSKGTL 144


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score = 38.1 bits (87), Expect(2) = 4e-06
 Identities = 16/44 (36%), Positives = 31/44 (70%)
 Frame = -3

Query: 392 KSLSNRLYLKEKFHTL*MEEGTSIVDHLSVLNRTVSELKAIEIK 261
           KSL+++LYLK++ + L M+E + +  H+ V N+ V +L  +++K
Sbjct: 96  KSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVK 139



 Score = 38.1 bits (87), Expect(2) = 4e-06
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = -2

Query: 261 KTEEEDVALRLI*SLPPSYKYLKPTLMHGKETV 163
           K ++ED A+ L+ SLPPSY+++   L HGK+T+
Sbjct: 139 KLDDEDKAIILLCSLPPSYEHVVTILTHGKDTI 171