BLASTX nr result
ID: Sinomenium21_contig00051546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00051546
(268 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006376509.1| hypothetical protein POPTR_0013s13650g [Popu... 89 8e-16
ref|XP_007198902.1| hypothetical protein PRUPE_ppa005316mg [Prun... 84 3e-14
ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
emb|CBI21840.3| unnamed protein product [Vitis vinifera] 78 1e-12
emb|CBI21839.3| unnamed protein product [Vitis vinifera] 78 1e-12
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera] 78 1e-12
emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera] 78 1e-12
ref|XP_006827770.1| hypothetical protein AMTR_s00009p00264540 [A... 78 1e-12
gb|EXB79633.1| hypothetical protein L484_011573 [Morus notabilis] 77 2e-12
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,... 77 2e-12
ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arab... 77 3e-12
gb|EXC18126.1| hypothetical protein L484_014527 [Morus notabilis] 76 6e-12
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,... 75 7e-12
ref|XP_006361033.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,... 75 1e-11
ref|XP_006376506.1| pentatricopeptide repeat-containing family p... 75 1e-11
ref|XP_002517929.1| pentatricopeptide repeat-containing protein,... 75 1e-11
>ref|XP_006376509.1| hypothetical protein POPTR_0013s13650g [Populus trichocarpa]
gi|550325785|gb|ERP54306.1| hypothetical protein
POPTR_0013s13650g [Populus trichocarpa]
Length = 482
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/77 (55%), Positives = 61/77 (79%), Gaps = 4/77 (5%)
Frame = +2
Query: 47 LFFSTET----LISRSSTSLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRT 214
LFFST+T L S ST+L ++I I DPRVSI+PVLD+WV+EGNTV+K L SL++
Sbjct: 30 LFFSTKTPTKPLSSSHSTTLCRRIEAIRDPRVSIVPVLDQWVKEGNTVDKHHLVSLVRLM 89
Query: 215 RNFRRFQHALEISQWMS 265
++++RF+HALE+S+WM+
Sbjct: 90 KDYKRFKHALEVSEWMT 106
>ref|XP_007198902.1| hypothetical protein PRUPE_ppa005316mg [Prunus persica]
gi|462394197|gb|EMJ00101.1| hypothetical protein
PRUPE_ppa005316mg [Prunus persica]
Length = 467
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/79 (53%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Frame = +2
Query: 38 VEVLFFSTETLISRSST--SLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQR 211
+ LF+STE L S S +L +I +PRVSI PVLD+WVEEG V K ELQS ++
Sbjct: 19 LRTLFYSTEALASCSPPFETLYHRISRAGNPRVSIAPVLDQWVEEGRDVNKSELQSFVKM 78
Query: 212 TRNFRRFQHALEISQWMSD 268
R +RR+ HAL+IS+WMSD
Sbjct: 79 LRKYRRYSHALQISEWMSD 97
>ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 86 TSLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRNFRRFQHALEISQWMS 265
+SL +I + DP+ SI P+L++W+EEG TV K +LQSL++ ++FRRF HALEISQWM+
Sbjct: 22 SSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMT 81
Query: 266 D 268
D
Sbjct: 82 D 82
>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 TSLLSRASRVEVLFFSTETLISRS-STSLQKKILPISDPRVSILPVLDKWVEEGNTVEKE 187
TS +SR RV L +STETL S + SLQ +I P D RVSI+P L++W +EG +++++
Sbjct: 11 TSSISRVFRV--LPYSTETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQ 68
Query: 188 ELQSLIQRTRNFRRFQHALEISQWMSD 268
+L LI++ R F+R+ HALEI +W+ D
Sbjct: 69 DLHRLIRKLRTFKRYNHALEIYEWIRD 95
>emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 86 TSLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRNFRRFQHALEISQWMS 265
+SL +I + DP+ SI P+L++W+EEG TV K +LQSL++ ++FRRF HALEISQWM+
Sbjct: 22 SSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMT 81
Query: 266 D 268
D
Sbjct: 82 D 82
>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 TSLLSRASRVEVLFFSTETLISRS-STSLQKKILPISDPRVSILPVLDKWVEEGNTVEKE 187
TS +SR RV L +STETL S + SLQ +I P D RVSI+P L++W +EG +++++
Sbjct: 11 TSSISRVFRV--LPYSTETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQ 68
Query: 188 ELQSLIQRTRNFRRFQHALEISQWMSD 268
+L LI++ R F+R+ HALEI +W+ D
Sbjct: 69 DLHRLIRKLRTFKRYNHALEIYEWIRD 95
>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 TSLLSRASRVEVLFFSTETLISRS-STSLQKKILPISDPRVSILPVLDKWVEEGNTVEKE 187
TS +SR RV L +STETL S + SLQ +I P D RVSI+P L++W +EG +++++
Sbjct: 11 TSSISRVFRV--LPYSTETLTSNAPKESLQSRISPAIDLRVSIVPALEQWRKEGRSIKQQ 68
Query: 188 ELQSLIQRTRNFRRFQHALEISQWMSD 268
+L LI++ R F+R+ HALEI +W+ D
Sbjct: 69 DLHRLIRKLRTFKRYNHALEIYEWIRD 95
>emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 86 TSLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRNFRRFQHALEISQWMS 265
+SL +I + DP+ SI P+L++W+EEG TV K +LQSL++ ++FRRF HALEISQWM+
Sbjct: 22 SSLYDRIQAVRDPKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMT 81
Query: 266 D 268
D
Sbjct: 82 D 82
>ref|XP_006827770.1| hypothetical protein AMTR_s00009p00264540 [Amborella trichopoda]
gi|548832390|gb|ERM95186.1| hypothetical protein
AMTR_s00009p00264540 [Amborella trichopoda]
Length = 503
Score = 77.8 bits (190), Expect = 1e-12
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 10/94 (10%)
Frame = +2
Query: 17 LLSRASR----------VEVLFFSTETLISRSSTSLQKKILPISDPRVSILPVLDKWVEE 166
+LSR SR V FST ++ S+ K+I P+ DP S++P+L++WV E
Sbjct: 5 ILSRVSRNWGFGVSEGITRVRVFST----GKAQDSIFKRISPLGDPGTSVVPLLEEWVRE 60
Query: 167 GNTVEKEELQSLIQRTRNFRRFQHALEISQWMSD 268
G V K +LQSL++ R +RR++HALEI +WMSD
Sbjct: 61 GRKVHKSDLQSLVKEMRRYRRYKHALEICRWMSD 94
>gb|EXB79633.1| hypothetical protein L484_011573 [Morus notabilis]
Length = 515
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Frame = +2
Query: 8 FTSLLSRASRVEVLFFSTETLISRSSTS-------LQKKILPISDPRVSILPVLDKWVEE 166
F L + S + + ST TL S SS S L ++I I DP+ S+LPVL +WV+E
Sbjct: 16 FLKNLQKCSLLSISLLSTRTLSSSSSNSSSNSSDSLFQRIQVIRDPKASVLPVLRQWVDE 75
Query: 167 GNTVEKEELQSLIQRTRNFRRFQHALEISQWMSD 268
G + K EL L++ ++FRRF HALEIS WM+D
Sbjct: 76 GRPIGKTELGWLVRTMKDFRRFNHALEISLWMTD 109
>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 300
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 9/83 (10%)
Frame = +2
Query: 47 LFFSTETLISR---------SSTSLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQS 199
LF+ST S+ + L ++I P+ DP+VSI+P+LD+W+EEG +V K++LQ
Sbjct: 27 LFYSTTPTSSQKWFRERGKDNLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQV 86
Query: 200 LIQRTRNFRRFQHALEISQWMSD 268
I+ R +R+ HALEIS WMSD
Sbjct: 87 FIKELRYCKRYTHALEISMWMSD 109
>ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata] gi|297315706|gb|EFH46129.1| hypothetical protein
ARALYDRAFT_354609 [Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 77.0 bits (188), Expect = 3e-12
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 6/83 (7%)
Frame = +2
Query: 38 VEVLFFSTETLISRSSTS------LQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQS 199
V VLF +SR S L K+I P+ DP++SI+PVLD+W EGN KEEL+
Sbjct: 14 VNVLFSLQRRTLSRGYGSSMGRFGLYKRISPLGDPKISIVPVLDEWRGEGNYTSKEELRG 73
Query: 200 LIQRTRNFRRFQHALEISQWMSD 268
+I+ ++RF HALE+S+WMSD
Sbjct: 74 MIKELIKYKRFVHALEVSRWMSD 96
>gb|EXC18126.1| hypothetical protein L484_014527 [Morus notabilis]
Length = 494
Score = 75.9 bits (185), Expect = 6e-12
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = +2
Query: 92 LQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRNFRRFQHALEISQWMSD 268
L ++I P+ +P VS++P+L++WV+EG V + ELQ +I+ R F+RF HALEISQWMSD
Sbjct: 59 LYRRISPVGNPNVSVVPILEQWVQEGKPVSQIELQRIIKELRIFKRFHHALEISQWMSD 117
>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +2
Query: 17 LLSRASRVEVLFFSTETLISRSST---SLQKKILPISDPRVSILPVLDKWVEEGNTVEKE 187
LL + ++ F +E + S+ +L ++I P+ DP +S+ P+LD+WV EG V+++
Sbjct: 3 LLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQD 62
Query: 188 ELQSLIQRTRNFRRFQHALEISQWMSD 268
EL+ +I+ R ++RF+HALEIS+WMSD
Sbjct: 63 ELRHIIKELRVYKRFKHALEISKWMSD 89
>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +2
Query: 17 LLSRASRVEVLFFSTETLISRSST---SLQKKILPISDPRVSILPVLDKWVEEGNTVEKE 187
LL + ++ F +E + S+ +L ++I P+ DP +S+ P+LD+WV EG V+++
Sbjct: 3 LLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQD 62
Query: 188 ELQSLIQRTRNFRRFQHALEISQWMSD 268
EL+ +I+ R ++RF+HALEIS+WMSD
Sbjct: 63 ELRHIIKELRVYKRFKHALEISKWMSD 89
>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Frame = +2
Query: 47 LFFSTETLISRSSTS----LQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRT 214
LFFST + SS+S L +I + DP+ SI+PVL++WV EG+TV K LQSL+
Sbjct: 31 LFFSTRSQTQSSSSSESSKLYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLM 90
Query: 215 RNFRRFQHALEISQWMSD 268
+ ++RF HALE+S WM+D
Sbjct: 91 KGYKRFNHALEMSHWMTD 108
>ref|XP_006361033.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Solanum tuberosum]
Length = 472
Score = 75.1 bits (183), Expect = 1e-11
Identities = 31/60 (51%), Positives = 48/60 (80%)
Frame = +2
Query: 89 SLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRNFRRFQHALEISQWMSD 268
SL ++I P+ DP SI+PVLD+W++EG V K+ELQ +I+ +++RR++HALE+S WM+D
Sbjct: 41 SLYRRISPLGDPNESIVPVLDQWIKEGKHVVKKELQYMIKSLKDYRRYKHALEVSYWMTD 100
>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = +2
Query: 50 FFSTETLISRSST---SLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRN 220
F ST T SS +L +I P +SI+P+L+KW+EEGN V+K ELQ +++ R
Sbjct: 24 FLSTSTYSLSSSAPIDTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRK 83
Query: 221 FRRFQHALEISQWMSD 268
+RRF HAL++S+WM+D
Sbjct: 84 YRRFTHALQVSEWMTD 99
>ref|XP_006376506.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550325782|gb|ERP54303.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 501
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +2
Query: 38 VEVLFFSTETLISRSSTSLQKKILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTR 217
+ L FST+T + S SL ++I + DP V ++PV++KWV+EG V +L+ I++ R
Sbjct: 19 LRALCFSTDT--TAISHSLNRRISMVEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLR 76
Query: 218 NFRRFQHALEISQWMSD 268
RF HAL+ISQWMSD
Sbjct: 77 KIHRFSHALQISQWMSD 93
>ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542911|gb|EEF44447.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 446
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +2
Query: 68 LISRSSTSLQK-KILPISDPRVSILPVLDKWVEEGNTVEKEELQSLIQRTRNFRRFQHAL 244
+I++ S L+ +I+ + DP+ S++PVLD+WV EGNTV K L+SL+ + F RF HAL
Sbjct: 1 MINKLSFPLKSSRIVNLKDPKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHAL 60
Query: 245 EISQWMSD 268
+ISQWM+D
Sbjct: 61 QISQWMAD 68