BLASTX nr result

ID: Sinomenium21_contig00051503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00051503
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854920.1| hypothetical protein AMTR_s00052p00103370 [A...    65   1e-08
ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_006854920.1| hypothetical protein AMTR_s00052p00103370 [Amborella trichopoda]
           gi|548858645|gb|ERN16387.1| hypothetical protein
           AMTR_s00052p00103370 [Amborella trichopoda]
          Length = 367

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = +3

Query: 6   NLNYXXXXXXXXXXXXVIEAREILVDMITKGLRPNFSVYVKVMKDLHRLGMKDMVIDLKS 185
           N+NY            ++EA  ILV+MI KGL+PNF V++KV+KDL   G ++M +DLK 
Sbjct: 294 NMNYSLLSSLLRKSGKIVEAHAILVEMIDKGLKPNFPVFIKVVKDLSHAGFREMGLDLKC 353

Query: 186 RFMK 197
           RF K
Sbjct: 354 RFSK 357


>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 54  VIEAREILVDMITKGLRPNFSVYVKVMKDLHRLGMKDMVIDLKSRFMKL 200
           +I A++IL++MI KGL+PNFSVY +V++ L + G +D+  DL+SRF  L
Sbjct: 525 LISAQKILIEMIEKGLKPNFSVYKRVLEHLDKSGREDLAGDLRSRFSSL 573


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