BLASTX nr result

ID: Sinomenium21_contig00051347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00051347
         (477 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465106.1| hypothetical protein SORBIDRAFT_01g032130 [S...    55   3e-07

>ref|XP_002465106.1| hypothetical protein SORBIDRAFT_01g032130 [Sorghum bicolor]
           gi|241918960|gb|EER92104.1| hypothetical protein
           SORBIDRAFT_01g032130 [Sorghum bicolor]
          Length = 375

 Score = 54.7 bits (130), Expect(2) = 3e-07
 Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
 Frame = -1

Query: 459 SNKGKNPLQSSPSSNRF------SPLFLSYNYKSGKA-QYFLRSSRRLLTIESHLMHYPL 301
           S KG++  +SSPS   +      SP+      K G A QY   S   +L +E +     L
Sbjct: 8   SFKGRSD-ESSPSKQTYQGKISKSPMTPE---KYGNASQYIQNSEEIILPLEFNDSDLDL 63

Query: 300 ERILD*SLPPNCQFLPTRLNITIKFYEAILSSTKSAIIEHTYNTDTKEIAFSKLKIMKII 121
           + IL    P +  F+P        +YE IL  T+SA I H  N +  E+ F+KL I K+I
Sbjct: 64  QNILGKYFPKDSYFIPEYPGKDQNYYETILCETQSAQIFH--NKNGGELGFTKLLIQKVI 121

Query: 120 HLDEWN 103
           HL+EW+
Sbjct: 122 HLEEWD 127



 Score = 25.4 bits (54), Expect(2) = 3e-07
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 52  NYYDYIQAWKTILFYKN 2
           NY+DY +AW+ +L  +N
Sbjct: 149 NYWDYQKAWERVLLVQN 165


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