BLASTX nr result

ID: Sinomenium21_contig00051062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00051062
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559516.1| PREDICTED: cytochrome c oxidase subunit 6b-1...    60   2e-07
ref|XP_003631480.1| PREDICTED: LOW QUALITY PROTEIN: putative cyt...    57   3e-06

>ref|XP_003559516.1| PREDICTED: cytochrome c oxidase subunit 6b-1-like [Brachypodium
           distachyon]
          Length = 127

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
 Frame = -2

Query: 182 LDPHDKMRARDVG----DEQAARPDREPGSVE------PPTGSVIIKIEEIGTAPPYPRF 33
           ++PHDKMRARDVG     EQA RP  EPGSV+      PP  +      E+ TAP   RF
Sbjct: 6   VNPHDKMRARDVGRVARGEQAPRPPHEPGSVDDSPPPPPPAEAEGGTTVELRTAPCDFRF 65

Query: 32  PFPNQTGHCY 3
           P  NQT HCY
Sbjct: 66  PTQNQTRHCY 75


>ref|XP_003631480.1| PREDICTED: LOW QUALITY PROTEIN: putative cytochrome c oxidase
           subunit 6b-like [Vitis vinifera]
          Length = 133

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
 Frame = -2

Query: 176 PHDKMRARDVGD----EQAARPDREPGSVE---PPTGSVIIKIEEIGTAPPYPRFPFPNQ 18
           PHD+MRARDV      EQA RP  E GS+    PP  ++  K+EE+ TAP   RFP  NQ
Sbjct: 9   PHDEMRARDVNKVARGEQAPRPTLELGSISQAPPPPPNLPKKVEEMRTAPADXRFPTTNQ 68

Query: 17  TGHCY 3
           T H Y
Sbjct: 69  TRHSY 73


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