BLASTX nr result
ID: Sinomenium21_contig00051041
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00051041
(441 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containi... 177 2e-42
ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containi... 161 8e-38
ref|XP_002517025.1| pentatricopeptide repeat-containing protein,... 160 1e-37
ref|XP_007034951.1| Tetratricopeptide repeat-like superfamily pr... 158 9e-37
emb|CBI26355.3| unnamed protein product [Vitis vinifera] 155 4e-36
ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containi... 149 4e-34
ref|XP_007226853.1| hypothetical protein PRUPE_ppa017194mg, part... 102 6e-20
ref|XP_006844317.1| hypothetical protein AMTR_s00143p00072540 [A... 100 3e-19
ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_007144146.1| hypothetical protein PHAVU_007G132600g [Phas... 99 6e-19
ref|XP_006844717.1| hypothetical protein AMTR_s00016p00252350 [A... 96 5e-18
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citr... 96 7e-18
ref|XP_006352928.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat... 94 2e-17
ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, p... 94 2e-17
ref|XP_007038198.1| Tetratricopeptide repeat-like superfamily pr... 94 2e-17
ref|XP_007214988.1| hypothetical protein PRUPE_ppa002028mg [Prun... 94 2e-17
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 94 2e-17
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th... 94 2e-17
>ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 177 bits (448), Expect = 2e-42
Identities = 82/146 (56%), Positives = 114/146 (78%)
Frame = -3
Query: 439 MNQNLLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDG 260
MN +LH++H+C++L+SLK IHA+LLI ++S+E +N+++R+Y+R GA D+A KVFD
Sbjct: 1 MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDE 60
Query: 259 IPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDG 80
I QPNA+LWT+LIHG+VEN YD+AF LF MRRE +S LNFT+S+VLK+L+R R G
Sbjct: 61 ITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGG 120
Query: 79 EIIHGLVLKSGFDSDTTVQNSLLDMF 2
+ ++G VLK GF D VQNS+LD+F
Sbjct: 121 QAVYGFVLKYGFAFDLIVQNSVLDLF 146
>ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 668
Score = 161 bits (408), Expect = 8e-38
Identities = 78/146 (53%), Positives = 109/146 (74%)
Frame = -3
Query: 439 MNQNLLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDG 260
MNQ + HLL +C++L LK +HA LL+ G I+S+++ LN++IR+Y+R GA ++ARKVFD
Sbjct: 1 MNQAVSHLLQTCKTLHRLKSVHAHLLVCGSIASSDLVLNKIIRLYSRFGATNYARKVFDE 60
Query: 259 IPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDG 80
IP+ N FLWT++IHG+VENS + +AF LFR MR V+PLNFT+S++LK+L R DG
Sbjct: 61 IPERNPFLWTSIIHGYVENSQHTEAFSLFRDMRIGDVTPLNFTISSILKALGRLKWPRDG 120
Query: 79 EIIHGLVLKSGFDSDTTVQNSLLDMF 2
E + GL+ K GF D VQNS++D F
Sbjct: 121 EGMLGLIWKCGFGFDLLVQNSVIDCF 146
Score = 56.2 bits (134), Expect = 5e-06
Identities = 31/113 (27%), Positives = 60/113 (53%)
Frame = -3
Query: 340 NEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHGHVENSNYDDAFILFRLMR 161
N V+ +I Y + G + AR +FD +PQ N W+ +I G+ +N A LF+ +
Sbjct: 290 NVVSWTMMIDGYVKSGKLHEARCLFDEMPQKNLITWSTMISGYAKNGKPSAALELFKNFK 349
Query: 160 RESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
++S+ + +++ + S+ + E + + + S + SDT V NSL+D++
Sbjct: 350 KQSLELDETFILSIISACSQLGIVDAVESVMSVDVGSRYFSDTRVVNSLVDLY 402
>ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543660|gb|EEF45188.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 640
Score = 160 bits (406), Expect = 1e-37
Identities = 71/147 (48%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Frame = -3
Query: 439 MNQNLLH-LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFD 263
MN +L+ LL C+SL++L IHA LLISG I+S+++TLN+++R+Y++ GA+ +A K+FD
Sbjct: 1 MNHSLISKLLKQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFD 60
Query: 262 GIPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSD 83
P+PN+FLWTALIHG EN+ Y++AF F M RE++ PLNFT+++VLK++SR R+ D
Sbjct: 61 ETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKD 120
Query: 82 GEIIHGLVLKSGFDSDTTVQNSLLDMF 2
G++++GL ++ G++ D V+N ++++F
Sbjct: 121 GDLVYGLAVRCGYEFDLVVKNVMIELF 147
>ref|XP_007034951.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|590658795|ref|XP_007034952.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713980|gb|EOY05877.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713981|gb|EOY05878.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 683
Score = 158 bits (399), Expect = 9e-37
Identities = 78/142 (54%), Positives = 106/142 (74%)
Frame = -3
Query: 427 LLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQP 248
+L LL QSL+ LK IHA+LLI G I+S+++ LN+ +R YAR G+I +A K+FD IPQP
Sbjct: 21 VLSLLDRAQSLKPLKSIHARLLIDGSIASSDLVLNKFLRFYARFGSIQYAHKLFDQIPQP 80
Query: 247 NAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIH 68
NAFLWTALIHG+VE+ NY + LF M ++SV PLNFT+++VLK L+R R+ DGE ++
Sbjct: 81 NAFLWTALIHGYVEHRNYQEVLSLFCHMCKKSVFPLNFTLASVLKGLARLKRVIDGEAVY 140
Query: 67 GLVLKSGFDSDTTVQNSLLDMF 2
GL LK G D VQN+++D+F
Sbjct: 141 GLGLKCGLGFDLIVQNAVIDLF 162
>emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 155 bits (393), Expect = 4e-36
Identities = 71/143 (49%), Positives = 104/143 (72%)
Frame = -3
Query: 439 MNQNLLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDG 260
MN +LH++H+C++L+SLK IHA+LLI ++S+E +N+++R+Y+R GA D+A KVFD
Sbjct: 1 MNPPILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDE 60
Query: 259 IPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDG 80
I QPNA+LWT+LIHG+VEN YD+AF LF MRRE +S LNFT+S+VLK+L+R R G
Sbjct: 61 ITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGG 120
Query: 79 EIIHGLVLKSGFDSDTTVQNSLL 11
+ ++G + D N ++
Sbjct: 121 QAVYGFAFDEMCEKDIVSWNMMI 143
>ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum lycopersicum]
Length = 668
Score = 149 bits (376), Expect = 4e-34
Identities = 73/146 (50%), Positives = 103/146 (70%)
Frame = -3
Query: 439 MNQNLLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDG 260
MNQ + LL +C++L SLK +HA LL+ G I+S+++ LN++IR+Y R GA ++ARKVFD
Sbjct: 1 MNQAVSRLLQTCKTLHSLKSVHAHLLVCGSIASSDLVLNKIIRLYTRFGATNYARKVFDE 60
Query: 259 IPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDG 80
IP+ N FLWT++IHG+VENS + AF LF M V+PLNFT+S++LK+L R
Sbjct: 61 IPERNPFLWTSMIHGYVENSQHTQAFSLFLDMHIGDVTPLNFTISSILKALGRLKWSRHS 120
Query: 79 EIIHGLVLKSGFDSDTTVQNSLLDMF 2
E + G++ K GF D VQNS++D F
Sbjct: 121 EGMLGIIWKCGFGFDLLVQNSVIDCF 146
>ref|XP_007226853.1| hypothetical protein PRUPE_ppa017194mg, partial [Prunus persica]
gi|462423789|gb|EMJ28052.1| hypothetical protein
PRUPE_ppa017194mg, partial [Prunus persica]
Length = 584
Score = 102 bits (254), Expect = 6e-20
Identities = 47/78 (60%), Positives = 64/78 (82%)
Frame = -3
Query: 235 WTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVL 56
+++LIHGHVEN Y++AF LF M ES+ PLNFT+++VLK+L+R+ R+ DGE I+GLVL
Sbjct: 15 YSSLIHGHVENRRYEEAFSLFTQMHGESIEPLNFTIASVLKALAREGRVKDGETINGLVL 74
Query: 55 KSGFDSDTTVQNSLLDMF 2
K GF SD TVQN++LD+F
Sbjct: 75 KFGFGSDLTVQNAILDLF 92
>ref|XP_006844317.1| hypothetical protein AMTR_s00143p00072540 [Amborella trichopoda]
gi|548846750|gb|ERN05992.1| hypothetical protein
AMTR_s00143p00072540 [Amborella trichopoda]
Length = 227
Score = 100 bits (248), Expect = 3e-19
Identities = 52/139 (37%), Positives = 84/139 (60%)
Frame = -3
Query: 418 LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAF 239
LL SC++ L IHA +L +G + N + +++R Y+ G ++ AR +FD + +PN F
Sbjct: 47 LLGSCKTASHLVQIHASILRNG-LDRNPLLQFKLLRSYSSSGLVNQARLLFDQVHEPNVF 105
Query: 238 LWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLV 59
WTA+I G N Y +A +L+ M+ V P +T S++LK+ S ++ + +GE HG V
Sbjct: 106 FWTAIIRGCALNGLYKEAILLYYQMQDGGVEPNAYTFSSLLKAFSMELLVREGEAAHGHV 165
Query: 58 LKSGFDSDTTVQNSLLDMF 2
LK D+ VQ+SL+DM+
Sbjct: 166 LKLQLGDDSFVQSSLIDMY 184
>ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 100 bits (248), Expect = 3e-19
Identities = 56/147 (38%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Frame = -3
Query: 433 QNLLHLLHSCQSLRSLK---PIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFD 263
Q+LLHLL C LRS K HAQ+L +GF + N R++ YA G + +R VF+
Sbjct: 29 QSLLHLLQLCIDLRSQKLAQQSHAQILANGF-AQNAFLATRLVSAYATCGELATSRFVFE 87
Query: 262 GIPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSD 83
+ + +LW +LI+G+V+N ++ A LFR M R + P ++T++ V K L
Sbjct: 88 SVEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVS 147
Query: 82 GEIIHGLVLKSGFDSDTTVQNSLLDMF 2
G++IHG ++ GF SD V NSL+ M+
Sbjct: 148 GKLIHGKGIRIGFVSDVVVGNSLMSMY 174
Score = 68.6 bits (166), Expect = 9e-10
Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = -3
Query: 319 VIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHGHVENSNYDDAFILFRLMR-RESVSP 143
+I +Y+R + R+VFD + N ++WTA+I+G+V+N DDA +L R M+ ++ + P
Sbjct: 281 LIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRP 340
Query: 142 LNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
++ + L + L G+ IHG +K + D ++ N+L+DM+
Sbjct: 341 NKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMY 387
>ref|XP_007144146.1| hypothetical protein PHAVU_007G132600g [Phaseolus vulgaris]
gi|561017336|gb|ESW16140.1| hypothetical protein
PHAVU_007G132600g [Phaseolus vulgaris]
Length = 599
Score = 99.0 bits (245), Expect = 6e-19
Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Frame = -3
Query: 436 NQNLLHLLHSCQSLRSLK---PIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVF 266
+ LLHLL C LR+ K HAQ+L +G+ + N R++ YA G + +R VF
Sbjct: 28 DHTLLHLLQLCIGLRAQKLAQQSHAQILANGY-AQNVFLATRLVSAYATCGGLTSSRFVF 86
Query: 265 DGIPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLS 86
+ + N +LW +LI+G+V+N N+ AF LF M R V P ++T++ V K L
Sbjct: 87 EFVEAKNVYLWNSLINGYVKNRNFHQAFALFGEMGRRGVLPDDYTLATVFKVSGELEDLV 146
Query: 85 DGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
G +IHG ++ GF SD V NSL+ M+
Sbjct: 147 SGRLIHGKSVRIGFVSDVVVANSLMAMY 174
Score = 68.9 bits (167), Expect = 7e-10
Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = -3
Query: 319 VIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHGHVENSNYDDAFILFRLMR-RESVSP 143
+I +Y+R + R+VFD + N ++WTA+I+G+V+N DDA +L R M+ + + P
Sbjct: 281 LIDMYSRSKRVVIGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLREMQMKGGIRP 340
Query: 142 LNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
++ +VL + + L+ G+ IHG +K D ++ N+L+DM+
Sbjct: 341 NKVSLVSVLPACASLAGLTGGKQIHGFSIKMELHDDASLCNALIDMY 387
>ref|XP_006844717.1| hypothetical protein AMTR_s00016p00252350 [Amborella trichopoda]
gi|548847188|gb|ERN06392.1| hypothetical protein
AMTR_s00016p00252350 [Amborella trichopoda]
Length = 258
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/138 (36%), Positives = 76/138 (55%)
Frame = -3
Query: 415 LHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAFL 236
L SC+SL LK IH LLISG + N ++I YA+ G + AR FD I N+FL
Sbjct: 71 LQSCKSLEELKQIHTSLLISGILQGNPHWEAQIISKYAKFGHLSIARSFFDRICGNNSFL 130
Query: 235 WTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVL 56
W + + + + L+ M RE + P N+T VLK+ + L +G ++H ++
Sbjct: 131 WNTMTRAYAQTGFGLETIELYARMIREGIKPNNYTYPFVLKACAMNSWLRNGRLVHQQII 190
Query: 55 KSGFDSDTTVQNSLLDMF 2
+SGF SD+ V+ L+DM+
Sbjct: 191 RSGFQSDSFVEAGLVDMY 208
>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
protein product [Vitis vinifera]
Length = 742
Score = 95.9 bits (237), Expect = 5e-18
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = -3
Query: 394 RSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHG 215
R L IHAQL++SG + S + + + + G I +ARKVFD P+P+ FLW A+I G
Sbjct: 85 RHLNQIHAQLVVSGLVESGFL-VTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRG 143
Query: 214 HVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSD 35
+ ++ + DA ++ M+ V+P FT+ VLK+ S L G+ +HG + + GF+SD
Sbjct: 144 YSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD 203
Query: 34 TTVQNSLLDMF 2
VQN L+ ++
Sbjct: 204 VFVQNGLVALY 214
Score = 70.9 bits (172), Expect = 2e-10
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Frame = -3
Query: 418 LLHSCQSLRSL---KPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQP 248
+L +C + L K +H Q+ GF S+ N ++ +YA+ G ++ AR VF+G+
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGF-ESDVFVQNGLVALYAKCGRVEQARIVFEGLDDR 233
Query: 247 NAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIH 68
N WT++I G+ +N +A +F MR+ +V P + +VL++ + L G+ IH
Sbjct: 234 NIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIH 293
Query: 67 GLVLKSGFDSDTTVQNSLLDMF 2
G V+K G + + + SL M+
Sbjct: 294 GCVVKMGLEFEPDLLISLTAMY 315
>ref|XP_006438782.1| hypothetical protein CICLE_v10033549mg [Citrus clementina]
gi|557540978|gb|ESR52022.1| hypothetical protein
CICLE_v10033549mg [Citrus clementina]
Length = 745
Score = 95.5 bits (236), Expect = 7e-18
Identities = 48/136 (35%), Positives = 80/136 (58%)
Frame = -3
Query: 418 LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAF 239
L SC +LR L +HA LL++G + + R+I YA G++ +R VFD +P++F
Sbjct: 7 LFRSCTNLRKLTRLHAHLLVTG-LHYDPPASTRLIESYAEMGSLRSSRLVFDTFKEPDSF 65
Query: 238 LWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLV 59
+W LI ++ N+ ++++ +L+ M RE + NF +VL++ S L GE +HG +
Sbjct: 66 MWAVLIKCYMWNNFFEESILLYHKMIREQATISNFIYPSVLRACSSLGDLGSGEKVHGRI 125
Query: 58 LKSGFDSDTTVQNSLL 11
+K GFD D +Q S+L
Sbjct: 126 IKCGFDKDDVIQTSIL 141
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Frame = -3
Query: 418 LLHSCQSLRSL---KPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQP 248
+L +C SL L + +H +++ GF ++V ++ Y G +D ARKVFD +
Sbjct: 105 VLRACSSLGDLGSGEKVHGRIIKCGF-DKDDVIQTSILCTYGEFGCLDDARKVFDKMTSR 163
Query: 247 NAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIH 68
+ W+++I + +N + + +F M RE V P T+ ++ ++ L IH
Sbjct: 164 DVVSWSSIIASYFDNGDVSEGLKMFHSMVREGVEPDFVTMLSLAEACGELCSLRPARSIH 223
Query: 67 GLVLKSGFDSDTTVQNSLLDMF 2
G VL+ D + NS + M+
Sbjct: 224 GHVLRRKIKIDGPLGNSFIVMY 245
>ref|XP_006352928.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Solanum tuberosum]
Length = 605
Score = 95.1 bits (235), Expect = 9e-18
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 1/145 (0%)
Frame = -3
Query: 433 QNLLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRI-YARHGAIDHARKVFDGI 257
Q + ++ C S+R LK +H Q+L GFI S+ + N + + G++D+A +FD I
Sbjct: 32 QEWISMIKKCNSMRELKQVHGQILKLGFICSSFCSGNLLSTCALSEWGSMDYACLIFDEI 91
Query: 256 PQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGE 77
P +F + +I G+V++ N ++A + + M + V P NF+ +LK +R L +G+
Sbjct: 92 DDPRSFEYNTVIRGYVKDMNLEEALLWYVHMIEDEVEPDNFSYPTLLKVCARIRALKEGK 151
Query: 76 IIHGLVLKSGFDSDTTVQNSLLDMF 2
IHG +LK G + D VQNSL++M+
Sbjct: 152 QIHGQILKFGHEDDVFVQNSLINMY 176
>ref|XP_006348719.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Solanum tuberosum]
gi|565405237|ref|XP_006368014.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At1g69350,
mitochondrial-like [Solanum tuberosum]
Length = 753
Score = 94.4 bits (233), Expect = 2e-17
Identities = 48/139 (34%), Positives = 82/139 (58%)
Frame = -3
Query: 418 LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAF 239
L SC S RS+ +HA L+I+G + + + ++I Y++ G++ +R VFD P P++F
Sbjct: 7 LFRSCSSSRSVAQLHAHLIING-LRKDPLASTKLIESYSQMGSLKTSRLVFDTFPNPDSF 65
Query: 238 LWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLV 59
+W +I HV NS + +A L+ M + +F +VL+++S L G +HG +
Sbjct: 66 MWGVIIKCHVWNSCFQEAIFLYHSMLCQLSETSSFIYPSVLRAISAIGDLGVGRKVHGRI 125
Query: 58 LKSGFDSDTTVQNSLLDMF 2
LK GF+SD+ V+ +LL M+
Sbjct: 126 LKCGFESDSVVETALLSMY 144
Score = 66.2 bits (160), Expect = 4e-09
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Frame = -3
Query: 427 LLHLLHSCQSLRSL---KPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGI 257
++ +L SC L L K IH ++ + F N++ + ++ +YA G + KVF
Sbjct: 304 VMAVLCSCARLGWLNEGKSIHGFIVRNAFDCDNDLLGSALVDLYANCGKLSDCHKVFGSS 363
Query: 256 PQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSD-G 80
+ W LI G+V+ D A LF M R+ + P ++T+++VL S S + S+ G
Sbjct: 364 QDRHIISWNMLISGYVQEGFSDKALTLFVDMVRKGILPDSYTLASVL-SASGDIGFSEFG 422
Query: 79 EIIHGLVLKSGFDSDTTVQNSLLDMF 2
IH V+++GF ++ VQNSL+DM+
Sbjct: 423 CQIHSHVIRTGFSTE-FVQNSLIDMY 447
Score = 64.7 bits (156), Expect = 1e-08
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Frame = -3
Query: 427 LLHLLHSCQSL---RSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGI 257
LL + C L R K +H +L I S+ +N ++ +Y + G A +F
Sbjct: 203 LLSAVEGCGELGVWRVGKSVHGYILRKN-IQSDGSLINSLVAMYGKCGDTCSAELLFRSA 261
Query: 256 PQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGE 77
+ + WTA++ + +N Y +A LF M V TV AVL S +R L++G+
Sbjct: 262 VDKSTYTWTAMMSCYNQNGRYHEALALFVKMHESDVEYNEVTVMAVLCSCARLGWLNEGK 321
Query: 76 IIHGLVLKSGFDSDTTVQNS-LLDMF 2
IHG ++++ FD D + S L+D++
Sbjct: 322 SIHGFIVRNAFDCDNDLLGSALVDLY 347
>ref|XP_006856643.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
trichopoda] gi|548860532|gb|ERN18110.1| hypothetical
protein AMTR_s01859p00006880, partial [Amborella
trichopoda]
Length = 190
Score = 94.4 bits (233), Expect = 2e-17
Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Frame = -3
Query: 424 LHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYA---RHGAIDHARKVFDGIP 254
L LL C++ + L IHA L+ G I + L+R++ I A A+ +A K+F+ IP
Sbjct: 37 LILLERCKNTKQLPQIHAHLIRLGLIF-HPYPLSRLLTISALSNSENALSYALKIFEQIP 95
Query: 253 QPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEI 74
QPN +++ +I H + + ++A +L+ M +++ P FT +LK++++ L +G+
Sbjct: 96 QPNLYMYNTIIRAHASSRSPENALLLYTEMLHQNIDPNKFTFPFLLKAIAKIPALLEGKT 155
Query: 73 IHGLVLKSGFDSDTTVQNSLLDMF 2
+HG+VLK+G SD VQNSL+ +
Sbjct: 156 VHGMVLKAGLSSDAFVQNSLIHFY 179
>ref|XP_007038198.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508775443|gb|EOY22699.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 753
Score = 94.4 bits (233), Expect = 2e-17
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 3/149 (2%)
Frame = -3
Query: 439 MNQNLLH-LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFD 263
+ +NL + LL+SC LK IH+ L SG I N ++I YA+ G + AR VFD
Sbjct: 75 LTENLCNRLLNSCNGSALLKQIHSSLTASGIIKRNSHLGAQIIIKYAKFGDNNSARSVFD 134
Query: 262 GI--PQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRL 89
I + N+FLW +I + + +A L+ MR+ ++P N+T VLK+ + + +
Sbjct: 135 TILGDKSNSFLWNTMIRAYANGGCHVEALELYSFMRKTDIAPNNYTFPFVLKACASKSLI 194
Query: 88 SDGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
+G+++HG +++GFD D V+ +L+DM+
Sbjct: 195 IEGKVVHGDAIRTGFDFDLYVEAALVDMY 223
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/128 (26%), Positives = 64/128 (50%)
Frame = -3
Query: 385 KPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHGHVE 206
K +HA + +GF++ V N +I +YA+ G + AR VFD + + + W +++ + +
Sbjct: 299 KIVHAYAICNGFLADVSVE-NAIIAMYAKCGNVSKARLVFDLMEERDGISWNSMLSCYTQ 357
Query: 205 NSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSDTTV 26
N +A +LF M P T ++ + + G +H LV+ D T+
Sbjct: 358 NGQASEALLLFEEMLDSGCKPNPVTALIMVSACAYLGSQHLGRKLHNLVIDEKIKIDATL 417
Query: 25 QNSLLDMF 2
+N+L+DM+
Sbjct: 418 RNALMDMY 425
>ref|XP_007214988.1| hypothetical protein PRUPE_ppa002028mg [Prunus persica]
gi|462411138|gb|EMJ16187.1| hypothetical protein
PRUPE_ppa002028mg [Prunus persica]
Length = 726
Score = 94.4 bits (233), Expect = 2e-17
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Frame = -3
Query: 418 LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYA--RHGAIDHARKVFDGIPQPN 245
L +C+S+ LK IHAQ + +G ++++ + LNR+I G + +AR+VFD IP+P+
Sbjct: 57 LFENCKSMDQLKQIHAQTMKTG-LTAHPMVLNRIIVFCCTDEFGDMKYARRVFDTIPEPS 115
Query: 244 AFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHG 65
FLW ++ G+ D ++ M+R SV P +T +LK +R++ L G+ +H
Sbjct: 116 VFLWNTMMKGYSRIRYPDYGVSMYFTMQRLSVKPDCYTFPFLLKGFTREIALECGKELHA 175
Query: 64 LVLKSGFDSDTTVQNSLLDMF 2
VLK GFDS+ VQN+L+ M+
Sbjct: 176 SVLKYGFDSNVFVQNALVHMY 196
Score = 73.9 bits (180), Expect = 2e-11
Identities = 41/128 (32%), Positives = 70/128 (54%)
Frame = -3
Query: 385 KPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHGHVE 206
K +HA +L GF SN N ++ +Y+ G ID AR VFD I + W +I G+
Sbjct: 171 KELHASVLKYGF-DSNVFVQNALVHMYSICGLIDMARGVFDMICEKEVATWNVMISGYNR 229
Query: 205 NSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSDTTV 26
YD+++ LF M+++ V P + T+ +VL + S+ L G+ +H V + + +
Sbjct: 230 VKKYDESWKLFNCMQKKGVLPTSVTLVSVLSACSKLKDLDTGKQVHKCVKECLIEPTLVL 289
Query: 25 QNSLLDMF 2
+N+L+DM+
Sbjct: 290 ENALVDMY 297
Score = 65.9 bits (159), Expect = 6e-09
Identities = 33/111 (29%), Positives = 63/111 (56%)
Frame = -3
Query: 334 VTLNRVIRIYARHGAIDHARKVFDGIPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRE 155
++ +++ +A G +D AR FD +P+ + WTA+I G ++ + + +A FR M+
Sbjct: 319 ISWTTIVKGFANSGQVDLARNYFDEMPERDYISWTAIIDGCLQVNRFKEALEFFRQMQTS 378
Query: 154 SVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
V P +T+ ++L + + L GE I + K+ +DT V+N+L+DM+
Sbjct: 379 YVKPDEYTMVSILTACAHLGALELGEWIKTYIDKNKIKNDTFVRNALIDMY 429
>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 94.4 bits (233), Expect = 2e-17
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Frame = -3
Query: 418 LLHSCQSLRSLKP---IHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQP 248
LL SC ++L P +HAQ G I+ N+ +++ +YA ++ +AR +FD IP+
Sbjct: 53 LLQSCIDSKALNPGKQLHAQFYHLG-IAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111
Query: 247 NAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIH 68
N FLW LI G+ N +D+A IL+ M + P NFT+ VLK+ S + +G IH
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171
Query: 67 GLVLKSGFDSDTTVQNSLLDMF 2
V+KSG++ D V +L+DM+
Sbjct: 172 EYVIKSGWERDLFVGAALIDMY 193
Score = 65.9 bits (159), Expect = 6e-09
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Frame = -3
Query: 436 NQNLLHLLHSCQSLRSL---KPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVF 266
N L +L +C +L ++ + IH ++ SG+ V +I +YA+ G + A +VF
Sbjct: 148 NFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGA-ALIDMYAKCGCVMDAGRVF 206
Query: 265 DGIPQPNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLS 86
D I +A LW +++ + +N + D++ L R M V P T+ V+ S + L
Sbjct: 207 DKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLP 266
Query: 85 DGEIIHGLVLKSGFDSDTTVQNSLLDMF 2
G IHG + GF S+ V+ +L+DM+
Sbjct: 267 YGREIHGFGWRHGFQSNDKVKTALIDMY 294
>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor
22 [Arabidopsis thaliana]
Length = 694
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/139 (35%), Positives = 79/139 (56%)
Frame = -3
Query: 418 LLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQPNAF 239
L+ S LK IHA+LL+ G S + + ++I + G I AR+VFD +P+P F
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFL-ITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 238 LWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEIIHGLV 59
W A+I G+ N+++ DA +++ M+ VSP +FT +LK+ S L G +H V
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 58 LKSGFDSDTTVQNSLLDMF 2
+ GFD+D VQN L+ ++
Sbjct: 146 FRLGFDADVFVQNGLIALY 164
Score = 67.8 bits (164), Expect = 2e-09
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Frame = -3
Query: 421 HLLHSCQSLRSLKP---IHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQ 251
HLL +C L L+ +HAQ+ GF ++ N +I +YA+ + AR VF+G+P
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGF-DADVFVQNGLIALYAKCRRLGSARTVFEGLPL 182
Query: 250 PNAFL--WTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGE 77
P + WTA++ + +N +A +F MR+ V P + +VL + + L G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 76 IIHGLVLKSGFDSDTTVQNSLLDMF 2
IH V+K G + + + SL M+
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMY 267
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/143 (23%), Positives = 74/143 (51%)
Frame = -3
Query: 430 NLLHLLHSCQSLRSLKPIHAQLLISGFISSNEVTLNRVIRIYARHGAIDHARKVFDGIPQ 251
++L+ Q L+ + IHA ++ G ++ ++ + +YA+ G + A+ +FD +
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS-LNTMYAKCGQVATAKILFDKMKS 285
Query: 250 PNAFLWTALIHGHVENSNYDDAFILFRLMRRESVSPLNFTVSAVLKSLSRQMRLSDGEII 71
PN LW A+I G+ +N +A +F M + V P ++++ + + ++ L +
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
Query: 70 HGLVLKSGFDSDTTVQNSLLDMF 2
+ V +S + D + ++L+DMF
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMF 368