BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00050798
         (347 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]   131   1e-28
ref|XP_006583283.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_006583282.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_007047666.1| Mitochondrial editing factor 22, putative [T...   122   7e-26
gb|EXC03889.1| Pentatricopeptide repeat-containing protein [Moru...   120   2e-25
ref|XP_004486867.1| PREDICTED: pentatricopeptide repeat-containi...   112   7e-23
ref|XP_007150478.1| hypothetical protein PHAVU_005G155900g [Phas...   111   1e-22
ref|XP_007032755.1| Pentatricopeptide repeat superfamily protein...    91   1e-16
ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat...    89   5e-16
emb|CBI29893.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002322694.1| pentatricopeptide repeat-containing family p...    89   5e-16
ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_002884315.1| pentatricopeptide repeat-containing protein ...    87   3e-15
gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabid...    86   4e-15
ref|NP_186882.2| pentatricopeptide repeat-containing protein [Ar...    86   4e-15
gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii]     86   5e-15
ref|XP_007159573.1| hypothetical protein PHAVU_002G248800g [Phas...    86   7e-15
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...    86   7e-15

>ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 602

 Score =  133 bits (334), Expect = 3e-29
 Identities = 62/115 (53%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           VDAKRVFDGM++HD  SWTS+I+GF++NG+GKE +L F EML ++I+PNC TY  VIS+C
Sbjct: 153 VDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSVISAC 212

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           T               V KLGF   +FV S LIDCY+ CG++DQA+ +F  T ER
Sbjct: 213 TGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIER 267



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/104 (34%), Positives = 56/104 (53%)
 Frame = +3

Query: 36  EHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTEFXXXXXXXX 215
           E D   + S+I+G++QN  G+E L LF+EM    + P   T + ++++C           
Sbjct: 266 ERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQ 325

Query: 216 XXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                V K+G ESN FV S+L+D Y+ CG +D+A  VF    E+
Sbjct: 326 VHSL-VAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEK 368


>emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
          Length = 1817

 Score =  131 bits (329), Expect = 1e-28
 Identities = 61/115 (53%), Positives = 79/115 (68%)
 Frame = +3

Query: 3    VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
            VDAKRVFDGM++HD  SWTS+I+GF++NG+GKE +L F EML ++I+PNC TY   IS+C
Sbjct: 1368 VDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISAC 1427

Query: 183  TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
            T               V KLGF   +FV S LIDCY+ CG++DQA+ +F  T ER
Sbjct: 1428 TGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIER 1482



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 35/104 (33%), Positives = 56/104 (53%)
 Frame = +3

Query: 36   EHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTEFXXXXXXXX 215
            E D   + S+I+G++QN  G+E L LF++M    + P   T + ++++C           
Sbjct: 1481 ERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQ 1540

Query: 216  XXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                 V K+G ESN FV S+L+D Y+ CG +D+A  VF    E+
Sbjct: 1541 VHSL-VAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEK 1583


>ref|XP_006583283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like isoform X2 [Glycine max]
          Length = 505

 Score =  122 bits (306), Expect = 5e-26
 Identities = 58/115 (50%), Positives = 78/115 (67%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           +DA++VF GMK HD  SWTSLI GF+ N QG++  LLF EML T++ PNCFT++ VIS+C
Sbjct: 62  LDARKVFSGMKIHDQVSWTSLITGFSINRQGRDAFLLFKEMLGTQVTPNCFTFASVISAC 121

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                           V K G+++N+FV SSLIDCYAN G++D A+ +F  TSE+
Sbjct: 122 VGQNGALEHCSTLHAHVIKRGYDTNNFVVSSLIDCYANWGQIDDAVLLFYETSEK 176



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA  +F    E D   + S+I+G++QN   ++ L LF+EM +  + P   T   ++++C+
Sbjct: 165 DAVLLFYETSEKDTVVYNSMISGYSQNLYSEDALKLFVEMRKKNLSPTDHTLCTILNACS 224

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K+G E N FVAS+LID Y+  G +D+A  V   TS++
Sbjct: 225 SL-AVLLQGRQMHSLVIKMGSERNVFVASALIDMYSKGGNIDEAQCVLDQTSKK 277


>ref|XP_006583282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like isoform X1 [Glycine max]
          Length = 549

 Score =  122 bits (306), Expect = 5e-26
 Identities = 58/115 (50%), Positives = 78/115 (67%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           +DA++VF GMK HD  SWTSLI GF+ N QG++  LLF EML T++ PNCFT++ VIS+C
Sbjct: 106 LDARKVFSGMKIHDQVSWTSLITGFSINRQGRDAFLLFKEMLGTQVTPNCFTFASVISAC 165

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                           V K G+++N+FV SSLIDCYAN G++D A+ +F  TSE+
Sbjct: 166 VGQNGALEHCSTLHAHVIKRGYDTNNFVVSSLIDCYANWGQIDDAVLLFYETSEK 220



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA  +F    E D   + S+I+G++QN   ++ L LF+EM +  + P   T   ++++C+
Sbjct: 209 DAVLLFYETSEKDTVVYNSMISGYSQNLYSEDALKLFVEMRKKNLSPTDHTLCTILNACS 268

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K+G E N FVAS+LID Y+  G +D+A  V   TS++
Sbjct: 269 SL-AVLLQGRQMHSLVIKMGSERNVFVASALIDMYSKGGNIDEAQCVLDQTSKK 321


>ref|XP_007047666.1| Mitochondrial editing factor 22, putative [Theobroma cacao]
           gi|508699927|gb|EOX91823.1| Mitochondrial editing factor
           22, putative [Theobroma cacao]
          Length = 527

 Score =  122 bits (305), Expect = 7e-26
 Identities = 56/112 (50%), Positives = 73/112 (65%)
 Frame = +3

Query: 9   AKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTE 188
           A+RVFD MK HD  SWTS+I+G +Q G GKE +L+F +M  T I+PNC TY  VIS+CT 
Sbjct: 144 ARRVFDSMKNHDQVSWTSIISGLSQKGHGKEAILMFKKMFGTCIKPNCVTYVSVISACTM 203

Query: 189 FXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSE 344
                         VTKLGF SNSFV  +L+DCY++CG++DQA+ +     E
Sbjct: 204 LEEALEESALLYGHVTKLGFNSNSFVLRALVDCYSSCGRIDQAVLLLKEAKE 255



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/105 (31%), Positives = 57/105 (54%)
 Frame = +3

Query: 33  KEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTEFXXXXXXX 212
           KE D     S+I+ ++QN  G E L LF++M +  +RP   T + ++++C+         
Sbjct: 254 KEWDNILLNSMISSYSQNLYGGEALKLFIKMRKENLRPTNHTLTSILNACSSL-TVVNEG 312

Query: 213 XXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                  TK+G +SN FV ++LID Y+ CG +++A   F  T ++
Sbjct: 313 RQLHALFTKMGSQSNVFVVTALIDMYSKCGYVEEARHGFDQTVQK 357


>gb|EXC03889.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
          Length = 633

 Score =  120 bits (301), Expect = 2e-25
 Identities = 59/115 (51%), Positives = 75/115 (65%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           VDA+RVF GM+ HD  SWTS+I GF++ G  +E +L+  EML T I+PN FTY  VIS+C
Sbjct: 154 VDARRVFYGMERHDQVSWTSIICGFSKKGHQREAILMLKEMLSTEIKPNSFTYVGVISAC 213

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           +E              V KLGF  N+FV SSLIDCY+  G++DQA  VF  T+ER
Sbjct: 214 SEIKDGLEQGLLLHAHVIKLGFGGNNFVVSSLIDCYSKWGEIDQAALVFGETTER 268



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 44/113 (38%), Positives = 61/113 (53%)
 Frame = +3

Query: 9   AKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTE 188
           A  VF    E D    +S+I+G++QN  G+E L LF EM    + PN    + V+++C  
Sbjct: 258 AALVFGETTERDIILLSSMISGYSQNLYGEEALRLFAEMRNMNLSPNEHALTSVLNACGN 317

Query: 189 FXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                         VTK+G ESN FVAS+LID Y+ CG +D+A  VF  T E+
Sbjct: 318 LTVLQEGSKVHSL-VTKMGSESNVFVASTLIDMYSKCGCIDEARCVFDQTVEK 369


>ref|XP_004486867.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
          Length = 537

 Score =  112 bits (279), Expect = 7e-23
 Identities = 56/115 (48%), Positives = 75/115 (65%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           V A+++F  MK HD  SWTSLIAGF+ N QG++ LLLF EML T+IRPNCFT + VI++C
Sbjct: 94  VYARKIFRAMKIHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTKIRPNCFTLTSVINAC 153

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                           V K GF++++FV SSLIDCYA  G++  A+ +F   SE+
Sbjct: 154 VGQNGALEHCPSLHVHVIKRGFDTSNFVTSSLIDCYAYWGQIHDALLLFNEVSEK 208



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/114 (34%), Positives = 58/114 (50%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA  +F+ + E D   + ++I+GF QN   ++ L LF+EM    + P   T   ++S+C+
Sbjct: 197 DALLLFNEVSEKDIVIYNTMISGFCQNLYSEDALKLFVEMQEKNMSPTDHTLCSILSACS 256

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K+G E N FVAS+LID Y+  G +D A  V   TS R
Sbjct: 257 SL-AVLLQGKQVHSLVIKIGSERNVFVASALIDMYSKGGDIDAARCVLDQTSNR 309


>ref|XP_007150478.1| hypothetical protein PHAVU_005G155900g [Phaseolus vulgaris]
           gi|561023742|gb|ESW22472.1| hypothetical protein
           PHAVU_005G155900g [Phaseolus vulgaris]
          Length = 527

 Score =  111 bits (277), Expect = 1e-22
 Identities = 56/115 (48%), Positives = 74/115 (64%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           +DAK+VF  +K HD  SWTSLI G + NGQG E   LF EML T+I+PNC T++ VIS+C
Sbjct: 122 LDAKKVFSDIKTHDQVSWTSLITGLSINGQGLEAFSLFKEMLCTQIKPNCLTFASVISAC 181

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                           + K G ++N+FV SSLIDCYAN G++D A+ +F  TSE+
Sbjct: 182 VGQNGSQHCSTLHTHTI-KQGCDTNNFVVSSLIDCYANQGQIDDAVHLFVETSEK 235



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/114 (31%), Positives = 57/114 (50%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA  +F    E D   + S+I+G+++N   ++ L LF+EM    +     T   V+++C+
Sbjct: 224 DAVHLFVETSEKDIVVYNSMISGYSKNMYSEDALKLFVEMRGRNLGLTNHTLCTVLNACS 283

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K+G E N FV S+LID Y+  G +D+A  V   TSE+
Sbjct: 284 SLALLLQGRQVHSL-VIKMGSERNVFVGSALIDMYSKGGDIDEAQLVLDQTSEK 336


>ref|XP_007032755.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508711784|gb|EOY03681.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 577

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA RVF+ M   +  SWT LI GFAQNG+G E L LF +ML  R++PN +TY CV+S+C 
Sbjct: 225 DASRVFNEMPVKNTVSWTGLITGFAQNGRGNEALNLFWQMLEERVQPNAYTYVCVLSACA 284

Query: 186 EF--XXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           +                V+      N FV ++LID Y  CG ++ A  +FA  SE+
Sbjct: 285 DLARIEIGKQIHGHIVRVSSRCDSLNEFVFNALIDMYCKCGDMNSAKLLFARISEK 340



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/110 (32%), Positives = 51/110 (46%)
 Frame = +3

Query: 9   AKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTE 188
           AK +F  + E D  SW SLI GFAQNG G+E L +F  M++   RPN  T+   +S+C  
Sbjct: 330 AKLLFARISEKDVVSWNSLITGFAQNGHGEESLDVFRMMIKANTRPNHVTFLGALSACNH 389

Query: 189 FXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAAT 338
                             G    S   + LID      +L++A+S+   T
Sbjct: 390 TGLVSEGLRILDLMEKDFGVIPRSDHYAILIDLLGRKNRLEEAMSMIERT 439


>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/114 (42%), Positives = 66/114 (57%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA+RV D M E +  SWT++I+G++Q G   E L LF+EML +   PN FT++ V++SCT
Sbjct: 530 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 589

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K  FES+ FV SSL+D YA  GK+ +A  VF    ER
Sbjct: 590 S-SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           +A+RVFDG+ E D  S T++I+G+AQ G  +E L LF  + R  +R N  TY+ V+++ +
Sbjct: 631 EARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 690

Query: 186 EFXXXXXXXXXXXXXV-TKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          +  KL F     + +SLID Y+ CG L  +  +F +  ER
Sbjct: 691 GLAALDHGRQVHSHVLRAKLPF--YVVLQNSLIDMYSKCGSLTYSRRIFDSMPER 743


>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/114 (42%), Positives = 66/114 (57%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA+RV D M E +  SWT++I+G++Q G   E L LF+EML +   PN FT++ V++SCT
Sbjct: 63  DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 122

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K  FES+ FV SSL+D YA  GK+ +A  VF    ER
Sbjct: 123 S-SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 175



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           +A+RVFDG+ E D  S T++I+G+AQ G  +E L LF  + R  +R N  TY+ V+++ +
Sbjct: 164 EARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 223

Query: 186 EFXXXXXXXXXXXXXV-TKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          +  KL F     + +SLID Y+ CG L  +  +F +  ER
Sbjct: 224 GLAALDHGRQVHSHVLRAKLPF--YVVLQNSLIDMYSKCGSLTYSRRIFDSMPER 276


>ref|XP_002322694.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867324|gb|EEF04455.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 586

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 46/113 (40%), Positives = 68/113 (60%)
 Frame = +3

Query: 9   AKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTE 188
           A+ VFD M+E +  SWT++I+G++Q G   E L LF++MLR+   PN FT++ V+SSCT 
Sbjct: 64  ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123

Query: 189 FXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           F             + K  +E++ FV SSL+D YA  G++ +A  VF    ER
Sbjct: 124 F-SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPER 175


>ref|XP_004250455.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Solanum lycopersicum]
          Length = 653

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/108 (43%), Positives = 61/108 (56%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA++VFD M E D  SWT+LI G++QN   KE L+LF EMLR    PN FT+  VI +  
Sbjct: 133 DARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTFGSVIKAAG 192

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVF 329
                          V K G+E N +V S+L+D YA CG +D+   VF
Sbjct: 193 ALESDSTGRQLHGACV-KCGYEDNVYVGSALVDMYARCGLMDEGKIVF 239



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/108 (35%), Positives = 55/108 (50%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           + K VFD +   +  SW  LIAG A+ G+G+  L LF EM R   +P  FT+S V ++C 
Sbjct: 234 EGKIVFDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACA 293

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVF 329
                          + K G E  +F+ ++L+D YA  G +D A  VF
Sbjct: 294 NIGALEPGKWVHVHMI-KSGLELIAFIGNTLLDMYAKSGSIDDARKVF 340



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/104 (29%), Positives = 51/104 (49%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA++VFD + + D  SW S++  +AQ+G G E +  F EM R    PN  T+ C +++C+
Sbjct: 335 DARKVFDRLVKKDVVSWNSMLTAYAQHGLGIETVECFEEMCRIGPEPNEVTFLCALTACS 394

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQA 317
                          + K   E N     +++D     G+LD+A
Sbjct: 395 H-AGLLDNGMHYFELMKKFKIEPNISHYVTIVDLLGRSGQLDRA 437


>ref|XP_006350965.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Solanum tuberosum]
          Length = 654

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 46/108 (42%), Positives = 61/108 (56%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA++VFD M E D  SWT+LI G++QN   KE L+LF EMLR    PN FT+  V+ +  
Sbjct: 134 DARKVFDEMPERDMVSWTALITGYSQNEGAKEGLVLFTEMLRFGFMPNQFTFGSVLKAAG 193

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVF 329
                          V K G+E N +V S+L+D YA CG +D+   VF
Sbjct: 194 ALESGGTGRQLHGGCV-KCGYEENVYVGSALVDMYARCGLMDEGKIVF 240



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/108 (35%), Positives = 55/108 (50%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           + K VFD +   +  SW  LIAG A+ G+G+  L LF EM R   +P  FT+S V ++C 
Sbjct: 235 EGKIVFDKLSCKNEVSWNGLIAGHARKGEGEIALKLFCEMKRGGFQPTHFTFSSVYAACA 294

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVF 329
                          + K G E  +F+ ++L+D YA  G +D A  VF
Sbjct: 295 NIGALEPGKWVHVHMI-KSGLELIAFIGNTLLDMYAKSGSIDDARKVF 341



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA++VFD + + D  SW S++  +AQ+G GKE +  F EM R    PN  T+ C +++C+
Sbjct: 336 DARKVFDRLLKKDVVSWNSMLTAYAQHGLGKETVECFEEMCRIGPEPNEVTFLCALTACS 395


>ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330155|gb|EFH60574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 861

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/114 (39%), Positives = 64/114 (56%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           +A RVFD M+  D  SW ++IA   QNG+G E L LF+ MLR+RI P+ FT+  V+ +CT
Sbjct: 393 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT 452

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          + K G  SNS V  SLID Y+ CG +++A  + +   +R
Sbjct: 453 --GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 504



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/99 (28%), Positives = 50/99 (50%)
 Frame = +3

Query: 51  SWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTEFXXXXXXXXXXXXX 230
           SW S+I+G+    Q ++  +LF  M+   I P+ FTY+ V+ +C                
Sbjct: 528 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL-ASAGLGKQIHAQ 586

Query: 231 VTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           V K   +S+ +++S+L+D Y+ CG L  +  +F  +  R
Sbjct: 587 VIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRR 625


>gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 44/114 (38%), Positives = 64/114 (56%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           +A RVFD M+  D  SW ++IA   QNG+G E L LF+ MLR+RI P+ FT+  ++ +CT
Sbjct: 393 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 452

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          + K G  SNS V  SLID Y+ CG +++A  + +   +R
Sbjct: 453 --GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 504



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/99 (28%), Positives = 49/99 (49%)
 Frame = +3

Query: 51  SWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTEFXXXXXXXXXXXXX 230
           SW S+I+G+    Q ++  +LF  M+   I P+ FTY+ V+ +C                
Sbjct: 528 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL-ASAGLGKQIHAQ 586

Query: 231 VTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           V K   +S+ ++ S+L+D Y+ CG L  +  +F  +  R
Sbjct: 587 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 625


>ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g02330 gi|332640272|gb|AEE73793.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 44/114 (38%), Positives = 64/114 (56%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           +A RVFD M+  D  SW ++IA   QNG+G E L LF+ MLR+RI P+ FT+  ++ +CT
Sbjct: 435 EAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT 494

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          + K G  SNS V  SLID Y+ CG +++A  + +   +R
Sbjct: 495 --GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/99 (28%), Positives = 49/99 (49%)
 Frame = +3

Query: 51  SWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCTEFXXXXXXXXXXXXX 230
           SW S+I+G+    Q ++  +LF  M+   I P+ FTY+ V+ +C                
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL-ASAGLGKQIHAQ 628

Query: 231 VTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           V K   +S+ ++ S+L+D Y+ CG L  +  +F  +  R
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667


>gb|EMT28838.1| hypothetical protein F775_05778 [Aegilops tauschii]
          Length = 548

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 46/114 (40%), Positives = 65/114 (57%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA+ V DGM E +  SWT++I+G++Q+ +  E L LF  MLR   +PN FT++ V++SC+
Sbjct: 28  DARNVLDGMPERNVVSWTAMISGYSQSSRHAEALELFTRMLRAGCKPNEFTFATVLTSCS 87

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
                          V K  FES+ FV SSL+D YA  G + +A  VF    ER
Sbjct: 88  G-PQSIHQVKQVHSLVAKTNFESHMFVGSSLLDMYAKAGNIQEARRVFDMLPER 140


>ref|XP_007159573.1| hypothetical protein PHAVU_002G248800g [Phaseolus vulgaris]
           gi|593793070|ref|XP_007159574.1| hypothetical protein
           PHAVU_002G248800g [Phaseolus vulgaris]
           gi|561032988|gb|ESW31567.1| hypothetical protein
           PHAVU_002G248800g [Phaseolus vulgaris]
           gi|561032989|gb|ESW31568.1| hypothetical protein
           PHAVU_002G248800g [Phaseolus vulgaris]
          Length = 641

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/108 (44%), Positives = 60/108 (55%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           DA+R+FD M   D  +WTS+I G+AQN    + L+LF +MLR   RPN FT S ++  C 
Sbjct: 121 DARRMFDEMPCRDMVTWTSMITGYAQNESANDALVLFPKMLREGARPNEFTLSSLV-KCC 179

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVF 329
            F               K G  SN FV SSL+D YA CG L +A SVF
Sbjct: 180 GFIASYGYGRQIHACCWKYGCYSNVFVGSSLVDMYARCGYLGEARSVF 227



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 55/108 (50%)
 Frame = +3

Query: 6   DAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSCT 185
           +A+ VFD +   +  SW +LI G+A+ G+G+E L +F+ M R   RP  FTYS ++ SC+
Sbjct: 222 EARSVFDELGCKNEVSWNALITGYARKGEGEEALAMFVRMQREGYRPTEFTYSALLCSCS 281

Query: 186 EFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVF 329
                          + K G +   +V ++L+  Y   G +  A  VF
Sbjct: 282 SM-GCLEQGKWLHAHLMKSGRKLVGYVGNTLLHMYTKSGSIWDAEKVF 328


>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/115 (39%), Positives = 69/115 (60%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           +DA+ VFD M E +  SWT++I+G+++ G   E L LF+ MLR+ I PN FT + V++SC
Sbjct: 527 MDARHVFDEMSERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSDIEPNEFTLATVLTSC 586

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           T+              + K  ++S+ FV SSL+D YA  G++ +A  VF +  ER
Sbjct: 587 TD-ASGSELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFESLPER 640



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/115 (30%), Positives = 59/115 (51%)
 Frame = +3

Query: 3   VDAKRVFDGMKEHDPASWTSLIAGFAQNGQGKEVLLLFMEMLRTRIRPNCFTYSCVISSC 182
           ++A+ VF+ + E D  S T++I+G+AQ G  +E L LF  + R  +  NC TY+ V++S 
Sbjct: 628 LEARMVFESLPERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLTSL 687

Query: 183 TEFXXXXXXXXXXXXXVTKLGFESNSFVASSLIDCYANCGKLDQAISVFAATSER 347
           +               V +        + +S+ID Y+ CG L+ A  +F +  ER
Sbjct: 688 SGL-AALDHGKQVHSHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPER 741