BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00050302
         (597 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   235   8e-60
emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]   233   2e-59
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   230   2e-58
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   227   2e-57
gb|ABF81447.1| NBS type disease resistance protein [Populus tric...   227   2e-57
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c...   227   2e-57
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   226   3e-57
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                       226   4e-57
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...   226   4e-57
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   226   4e-57
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   226   5e-57
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   226   5e-57
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...   224   1e-56
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   224   1e-56
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   224   1e-56
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   224   1e-56
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   224   1e-56
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         224   1e-56
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   224   1e-56
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle...   224   2e-56

>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  235 bits (599), Expect = 8e-60
 Identities = 115/188 (61%), Positives = 148/188 (78%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
            R V KGY Q+HG+DY E+FAPVAR+E IRLV+ALAAQ  W+I+Q+D+KSAFL+G L EEV
Sbjct: 845  RLVAKGYTQQHGVDYTEVFAPVARMETIRLVVALAAQRKWTIYQLDVKSAFLHGELNEEV 904

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            +V+QP  YV+KG E KV  LKKALYGLK+ P A Y+ I+ YF+K  F+KC YEHTL+IK 
Sbjct: 905  FVEQPCGYVQKGHEQKVYKLKKALYGLKQAPXAWYSXIEAYFMKEGFEKCDYEHTLFIKT 964

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
             K G++L+V LYVD+L+F GN   M + FK SM +EF+MT++G + +FLG+EV+Q   GI
Sbjct: 965  RKEGKVLIVSLYVDDLIFTGNDELMFTDFKRSMKDEFDMTDLGKMRYFLGLEVLQRSDGI 1024

Query: 540  FISQKKYA 563
            FISQKKYA
Sbjct: 1025 FISQKKYA 1032


>emb|CAN74536.1| hypothetical protein VITISV_023111 [Vitis vinifera]
          Length = 1278

 Score =  233 bits (595), Expect = 2e-59
 Identities = 114/186 (61%), Positives = 146/186 (78%), Gaps = 1/186 (0%)
 Frame = +3

Query: 9    VVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVLEE-VYV 185
            V KGYKQ+ G+DY+ +FAPVA+L+ I LVL++AAQ+ WSIHQ+D+KSAFL+G LEE VY+
Sbjct: 821  VAKGYKQEFGVDYKXVFAPVAKLDTIXLVLSMAAQNSWSIHQLDVKSAFLHGXLEEEVYI 880

Query: 186  DQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKEGK 365
            DQP  YVK+G E +V  LKKALYGLK+ PRA Y+ ID YF++  F KC YEHTLY K G 
Sbjct: 881  DQPPGYVKQGYENQVYKLKKALYGLKQAPRAWYSRIDAYFIEEGFIKCPYEHTLYTKYGV 940

Query: 366  AGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGIFI 545
              +IL+VCLYVD+L++  N+  M + FK SMM  F+MT+MG +H+FLGIEV+Q   G+FI
Sbjct: 941  DKKILIVCLYVDDLIYTSNNKTMLADFKKSMMKXFDMTDMGLMHYFLGIEVVQSSAGVFI 1000

Query: 546  SQKKYA 563
            SQKKYA
Sbjct: 1001 SQKKYA 1006


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  230 bits (587), Expect = 2e-58
 Identities = 111/190 (58%), Positives = 150/190 (78%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVLEE-V 179
            R V KGY Q+HGIDY E+FAPVAR + IR+V+ALAA++GWS++Q+D+KSAFL+G L E V
Sbjct: 662  RLVAKGYAQQHGIDYTEVFAPVARWDTIRMVIALAARNGWSVYQLDVKSAFLHGELNEAV 721

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            +++QP  Y KKGEE KV  LKKALYGLK+ PRA Y+ I+ YF+K  F++CS +HTL+IK 
Sbjct: 722  FIEQPQGYEKKGEEHKVYKLKKALYGLKQAPRAWYSRIEAYFIKEGFERCSCDHTLFIKT 781

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            G  G+IL+V LYVD+L+F GN  +M   FK SM  EF+MT++G + +FLG+EV+Q  +GI
Sbjct: 782  GDGGKILIVSLYVDDLIFTGNDESMFVKFKNSMKLEFDMTDLGKMKYFLGVEVLQNSEGI 841

Query: 540  FISQKKYAND 569
            +ISQ+KYA +
Sbjct: 842  YISQRKYAKE 851


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  227 bits (579), Expect = 2e-57
 Identities = 112/190 (58%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
            R V KGY Q++G DY E+FAPVARLE IR+V++LAAQ  W I+Q+D+KSAFL+G + EE 
Sbjct: 641  RLVAKGYSQQYGXDYVEVFAPVARLETIRIVISLAAQKDWMIYQLDVKSAFLHGEIHEEX 700

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            +V+QP  Y +KG+E KV  LKKALYGLK+ PRA Y+ I+ YF+K  F KC YEHTL+ K 
Sbjct: 701  FVEQPPGYEQKGKESKVYRLKKALYGLKQAPRAWYSRIESYFIKEGFNKCPYEHTLFTKT 760

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
             + G+IL+VCLYVD L+F GN  +M   FK SMM EF+MT++  L +FLGIEVMQ   GI
Sbjct: 761  AEGGKILIVCLYVDELIFTGNDESMFKQFKKSMMVEFDMTDLEKLRYFLGIEVMQKTDGI 820

Query: 540  FISQKKYAND 569
            FI+Q+KYA +
Sbjct: 821  FINQRKYAQE 830


>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 972

 Score =  227 bits (579), Expect = 2e-57
 Identities = 111/190 (58%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVLEE-V 179
           R V KGYKQ+ GIDY E+FAPVARLE IRL+++LAAQH W I+Q+D+KSAFLNG LEE +
Sbjct: 48  RLVAKGYKQREGIDYGEVFAPVARLETIRLMISLAAQHRWKIYQLDVKSAFLNGFLEEEI 107

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           YV+QPL Y++   + KV  LKKALYGLK+ P A    ID YF  N F+KC YEH +Y+K+
Sbjct: 108 YVEQPLGYIEAENKGKVYKLKKALYGLKQAPPAWNTRIDRYFQDNGFEKCPYEHAIYVKK 167

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
           G  G IL  CLYVD+L+F GN+  M   FK +M++EFEMT++G +  FLG+EV Q  +GI
Sbjct: 168 GANGSILFACLYVDDLIFTGNNPTMFDDFKQNMVHEFEMTDIGLMSHFLGLEVTQKEEGI 227

Query: 540 FISQKKYAND 569
           F+SQ  YA D
Sbjct: 228 FVSQSGYAKD 237


>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  227 bits (578), Expect = 2e-57
 Identities = 114/190 (60%), Positives = 142/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFKEQDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G ++++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMYYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  226 bits (577), Expect = 3e-57
 Identities = 115/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    I+ YF K DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FISQ+ YA +
Sbjct: 241 FISQEGYAKE 250


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score =  226 bits (576), Expect = 4e-57
 Identities = 114/190 (60%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
            R V KGYKQK GIDY E+FAPV R+E IRL+++ AAQ  W I QMD+KSAFLNGVL EEV
Sbjct: 900  RLVAKGYKQKEGIDYDEVFAPVVRMETIRLLISQAAQFKWPIFQMDVKSAFLNGVLEEEV 959

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            Y++QP  Y+K GEE KV  LKKALYGLK+ PRA    ID YF +N FK+C YEH LY K 
Sbjct: 960  YIEQPPGYMKIGEEKKVLKLKKALYGLKQAPRAWNTRIDTYFKENGFKQCPYEHALYAK- 1018

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
               G ++ V LYVD+L+FMGN+ +M   FK +M  EFEMT++G + FFLG+EV Q   GI
Sbjct: 1019 NNGGNMIFVALYVDDLIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGI 1078

Query: 540  FISQKKYAND 569
            F+SQ+KYA +
Sbjct: 1079 FVSQEKYAKE 1088


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score =  226 bits (576), Expect = 4e-57
 Identities = 113/190 (59%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY QK GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYSQKAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKK LYGLK+ PRA    ID YF +  F KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKTLYGLKQAPRAWNTRIDKYFKEKKFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            +  ++L+ CLYVD+L+F GN+ NM  +FK  M  EFEMT++GF+ ++LGIEV Q   GI
Sbjct: 182 -QNNDLLIACLYVDDLIFTGNNPNMFELFKMEMTKEFEMTDIGFMSYYLGIEVKQEDSGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  226 bits (576), Expect = 4e-57
 Identities = 115/190 (60%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL++ LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K G IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QKDG-ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  226 bits (575), Expect = 5e-57
 Identities = 114/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  226 bits (575), Expect = 5e-57
 Identities = 114/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
            R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 869  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 928

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 929  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 988

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
             K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 989  QKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 1047

Query: 540  FISQKKYAND 569
            FI+Q+ YA +
Sbjct: 1048 FITQEGYAKE 1057


>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  224 bits (572), Expect = 1e-56
 Identities = 113/190 (59%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG   EEV
Sbjct: 62  RLVAKGYSQRTGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDFEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYCQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  224 bits (572), Expect = 1e-56
 Identities = 113/190 (59%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PR+    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
            R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 901  RLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 961  YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
             K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 1021 QKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 1079

Query: 540  FISQKKYAND 569
            FI+Q+ YA +
Sbjct: 1080 FITQEGYAKE 1089


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  224 bits (571), Expect = 1e-56
 Identities = 113/190 (59%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KS FLNG L EEV
Sbjct: 62  RLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  224 bits (571), Expect = 1e-56
 Identities = 113/190 (59%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 398 RLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 457

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKK LYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 458 YIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 517

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 518 QKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 576

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 577 FITQEGYAKE 586


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  224 bits (571), Expect = 1e-56
 Identities = 113/190 (59%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
            R V KGY Q+ GIDY E+FAPVARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 901  RLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960

Query: 180  YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
            Y++QP  Y+ KGEE KV  LKK LYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 961  YIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020

Query: 360  GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
             K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 1021 QKE-DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 1079

Query: 540  FISQKKYAND 569
            FI+Q+ YA +
Sbjct: 1080 FITQEGYAKE 1089


>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  224 bits (570), Expect = 2e-56
 Identities = 114/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3   RFVVKGYKQKHGIDYQEMFAPVARLEIIRLVLALAAQHGWSIHQMDIKSAFLNGVL-EEV 179
           R VVKGY Q+ GIDY E+FA VARLE +RL+++LAAQ+ W IHQMD+KSAFLNG L EEV
Sbjct: 62  RLVVKGYSQRAGIDYDEVFALVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 121

Query: 180 YVDQPLSYVKKGEEMKVCHLKKALYGLKKTPRA*YNWIDHYFLKNDFKKCSYEHTLYIKE 359
           Y++QP  Y+ KGEE KV  LKKALYGLK+ PRA    ID YF + DF KC YEH LYIK 
Sbjct: 122 YIEQPQGYIVKGEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 181

Query: 360 GKAGEILLVCLYVDNLVFMGNSGNMCSVFKTSMMNEFEMTNMGFLHFFLGIEVMQIPKGI 539
            K  +IL+ CLYVD+L+F GN+ +M   FK  M  EFEMT++G + ++LGIEV Q   GI
Sbjct: 182 QK-DDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGI 240

Query: 540 FISQKKYAND 569
           FI+Q+ YA +
Sbjct: 241 FITQEGYAKE 250