BLASTX nr result
ID: Sinomenium21_contig00050192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00050192
(284 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15512.3| unnamed protein product [Vitis vinifera] 123 2e-26
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera] 120 1e-25
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,... 112 4e-23
ref|XP_006446568.1| hypothetical protein CICLE_v10018361mg, part... 112 7e-23
gb|EXC20330.1| hypothetical protein L484_020550 [Morus notabilis] 111 9e-23
ref|XP_006470265.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22
ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
ref|XP_002324003.1| hypothetical protein POPTR_0017s10790g [Popu... 106 3e-21
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|XP_004489223.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_007153224.1| hypothetical protein PHAVU_003G017200g [Phas... 102 4e-20
ref|XP_007216273.1| hypothetical protein PRUPE_ppa017372mg, part... 99 5e-19
ref|XP_007150988.1| hypothetical protein PHAVU_004G0099000g, par... 93 4e-17
ref|XP_007150989.1| hypothetical protein PHAVU_004G0099000g, par... 92 6e-17
ref|XP_003618141.1| Pentatricopeptide repeat-containing protein ... 92 1e-16
ref|XP_006350584.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_006405498.1| hypothetical protein EUTSA_v10027688mg [Eutr... 90 4e-16
ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. l... 89 5e-16
ref|NP_198856.2| pentatricopeptide repeat-containing protein [Ar... 87 2e-15
>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 123 bits (309), Expect = 2e-26
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Frame = +3
Query: 3 NGKATSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCII 182
N LH E+ +LPHLG EISRVL RCQS F+AL+FFNWVKNDLGLRP+ NYCI+
Sbjct: 81 NSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIV 140
Query: 183 IHILAWSQEFALSMKF---LTELASDECPSTAVFQNL 284
+H LAWS+ F+ +MKF L EL D+ PS VF+NL
Sbjct: 141 VHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNL 177
>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 120 bits (302), Expect = 1e-25
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Frame = +3
Query: 3 NGKATSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCII 182
N LH E+ +LPHLG EISRVL RCQS F+AL+FFNWVKNDLGLRP+ NYCII
Sbjct: 126 NSNLALLHTEVNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCII 185
Query: 183 IHILAWSQEFALSMKF---LTELASDECPSTAVFQNL 284
+H LAWS+ F+ ++KF L EL D+ P VF+NL
Sbjct: 186 VHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNL 222
>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 623
Score = 112 bits (281), Expect = 4e-23
Identities = 51/80 (63%), Positives = 62/80 (77%)
Frame = +3
Query: 3 NGKATSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCII 182
N L +++ +LPHLGT EISRVL RCQS SAL FF+WVKNDLGL+P+I NYC +
Sbjct: 72 NSHLNLLQNDVKHLLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFL 131
Query: 183 IHILAWSQEFALSMKFLTEL 242
+HILAWS+EF +MKFLTEL
Sbjct: 132 VHILAWSKEFKEAMKFLTEL 151
>ref|XP_006446568.1| hypothetical protein CICLE_v10018361mg, partial [Citrus clementina]
gi|557549179|gb|ESR59808.1| hypothetical protein
CICLE_v10018361mg, partial [Citrus clementina]
Length = 603
Score = 112 bits (279), Expect = 7e-23
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
Frame = +3
Query: 15 TSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHIL 194
T L ++++ +LPHLG HEISRVL RCQS SAL FFNWVKNDL ++PT NYC+I+HIL
Sbjct: 59 TLLQDDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTNSNYCLIVHIL 118
Query: 195 AWSQEFALSMKFLTELAS--DECP-STAVFQNL 284
AW+ +F+ +MK L EL +CP S VFQ+L
Sbjct: 119 AWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 151
>gb|EXC20330.1| hypothetical protein L484_020550 [Morus notabilis]
Length = 666
Score = 111 bits (278), Expect = 9e-23
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = +3
Query: 21 LHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAW 200
L +I+ +LP+LG +EISRVL RCQS+ SAL FFNWVKNDLGLRPT NYCI++HILAW
Sbjct: 123 LQNDIKTLLPYLGPNEISRVLLRCQSNHSSALTFFNWVKNDLGLRPTTQNYCIVVHILAW 182
Query: 201 SQEFALSMKFLTELASDECPSTAVFQNL 284
S++F+ +MK LTEL + P +FQ L
Sbjct: 183 SRKFSPAMKLLTELI-EVSPKDDIFQIL 209
>ref|XP_006470265.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like isoform X1 [Citrus sinensis]
gi|568832069|ref|XP_006470266.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X2 [Citrus sinensis]
Length = 621
Score = 109 bits (273), Expect = 3e-22
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = +3
Query: 15 TSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHIL 194
T L +++ +LPHLG HEISRVL RCQS SAL FFNWVKNDL ++PT NYC+I+HIL
Sbjct: 77 TLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTTSNYCLIVHIL 136
Query: 195 AWSQEFALSMKF---LTELASDECPSTAVFQNL 284
AW+ +F+ +MK L EL D S VFQ+L
Sbjct: 137 AWNNKFSFAMKMLCELVELVKDCSHSVDVFQDL 169
>ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like isoform X1 [Glycine max]
gi|571454399|ref|XP_006579777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X2 [Glycine max]
gi|571454402|ref|XP_006579778.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X3 [Glycine max]
gi|571454404|ref|XP_006579779.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X4 [Glycine max]
Length = 626
Score = 107 bits (266), Expect = 2e-21
Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
Frame = +3
Query: 18 SLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILA 197
S + +I+ +LPH+G HEISR+L RCQS S L FFNWVKNDL + PT+HNYC+I+HILA
Sbjct: 72 SSNNDIKGILPHMGPHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILA 131
Query: 198 WSQEFALSMKFLTEL-----ASDEC--PSTAVFQNL 284
WS+ F+ +M L+EL C P+ +++NL
Sbjct: 132 WSRVFSHAMNLLSELIQLVEVEGVCVPPNDGIYENL 167
>ref|XP_002324003.1| hypothetical protein POPTR_0017s10790g [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| hypothetical protein
POPTR_0017s10790g [Populus trichocarpa]
Length = 626
Score = 106 bits (265), Expect = 3e-21
Identities = 47/73 (64%), Positives = 61/73 (83%)
Frame = +3
Query: 24 HEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWS 203
+++I+ ++ HLG +EISRVL RCQS SAL FFNWVKNDLGL+P+ NYC+I+H+LAWS
Sbjct: 84 NDDIKGLIHHLGANEISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWS 143
Query: 204 QEFALSMKFLTEL 242
+EF +MKFLTEL
Sbjct: 144 KEFEQAMKFLTEL 156
>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 106 bits (264), Expect = 4e-21
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Frame = +3
Query: 3 NGKATSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCII 182
N + L I+ ++PHLG +IS++L RCQS+ SAL FFNWVK DL +R + HNYC+I
Sbjct: 83 NPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLI 142
Query: 183 IHILAWSQEFALSMKFLT---ELASDECPSTAVFQNL 284
IHILAWS++F L+MKFL+ EL+ D S VFQNL
Sbjct: 143 IHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQNL 179
>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 106 bits (264), Expect = 4e-21
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Frame = +3
Query: 3 NGKATSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCII 182
N + L I+ ++PHLG +IS++L RCQS+ SAL FFNWVK DL +R + HNYC+I
Sbjct: 79 NPRLALLQSHIKELIPHLGHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLI 138
Query: 183 IHILAWSQEFALSMKFLT---ELASDECPSTAVFQNL 284
IHILAWS++F L+MKFL+ EL+ D S VFQNL
Sbjct: 139 IHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQNL 175
>ref|XP_004489223.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like isoform X1 [Cicer arietinum]
gi|502090426|ref|XP_004489224.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X2 [Cicer arietinum]
Length = 622
Score = 103 bits (257), Expect = 2e-20
Identities = 50/85 (58%), Positives = 63/85 (74%)
Frame = +3
Query: 30 EIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWSQE 209
E + +LPHLG+HEISRVL RCQS SAL FFNWVKNDL + ++ NYCI++HILAWSQ
Sbjct: 80 ECKVILPHLGSHEISRVLLRCQSDYSSALTFFNWVKNDLCITHSVQNYCIVVHILAWSQV 139
Query: 210 FALSMKFLTELASDECPSTAVFQNL 284
F+ +MK L+EL P V+Q+L
Sbjct: 140 FSQAMKLLSELI-QLVPDEDVYQSL 163
>ref|XP_007153224.1| hypothetical protein PHAVU_003G017200g [Phaseolus vulgaris]
gi|561026578|gb|ESW25218.1| hypothetical protein
PHAVU_003G017200g [Phaseolus vulgaris]
Length = 631
Score = 102 bits (255), Expect = 4e-20
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +3
Query: 30 EIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWSQE 209
+I+ +LP LG HEISRVL RCQS SAL FFNWVKNDL + PT+ NYC+I+H+LAWS+
Sbjct: 83 DIKGILPQLGPHEISRVLLRCQSDHSSALTFFNWVKNDLNITPTVQNYCVILHVLAWSRV 142
Query: 210 FALSMKFLTEL 242
FA +M+ L EL
Sbjct: 143 FAQAMELLAEL 153
>ref|XP_007216273.1| hypothetical protein PRUPE_ppa017372mg, partial [Prunus persica]
gi|462412423|gb|EMJ17472.1| hypothetical protein
PRUPE_ppa017372mg, partial [Prunus persica]
Length = 601
Score = 99.4 bits (246), Expect = 5e-19
Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +3
Query: 3 NGKATSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCII 182
N + L +I+ + PHLG EISRVL R S SAL FFNWVKN LGLRPT NYCI+
Sbjct: 50 NAHLSLLQNDIKELFPHLGAQEISRVLLRFHSDYSSALVFFNWVKNGLGLRPTTQNYCIV 109
Query: 183 IHILAWSQEFALSMKF---LTELASDECPSTAVFQNL 284
IHILA S++F +MK L EL D P +FQNL
Sbjct: 110 IHILACSKKFPQAMKLLWELIELVRDVSPKDDIFQNL 146
>ref|XP_007150988.1| hypothetical protein PHAVU_004G0099000g, partial [Phaseolus
vulgaris] gi|561024297|gb|ESW22982.1| hypothetical
protein PHAVU_004G0099000g, partial [Phaseolus vulgaris]
Length = 141
Score = 92.8 bits (229), Expect = 4e-17
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = +3
Query: 30 EIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWSQ 206
+I+ +LP LG HEISRVL RCQS SAL FFNWVKNDL + PT+ NYC+I+H+LAWS+
Sbjct: 83 DIKGILPQLGPHEISRVLLRCQSDHSSALTFFNWVKNDLNITPTVQNYCVILHVLAWSR 141
>ref|XP_007150989.1| hypothetical protein PHAVU_004G0099000g, partial [Phaseolus
vulgaris] gi|593701145|ref|XP_007150990.1| hypothetical
protein PHAVU_004G0099000g, partial [Phaseolus vulgaris]
gi|561024298|gb|ESW22983.1| hypothetical protein
PHAVU_004G0099000g, partial [Phaseolus vulgaris]
gi|561024299|gb|ESW22984.1| hypothetical protein
PHAVU_004G0099000g, partial [Phaseolus vulgaris]
Length = 140
Score = 92.4 bits (228), Expect = 6e-17
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = +3
Query: 30 EIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWS 203
+I+ +LP LG HEISRVL RCQS SAL FFNWVKNDL + PT+ NYC+I+H+LAWS
Sbjct: 83 DIKGILPQLGPHEISRVLLRCQSDHSSALTFFNWVKNDLNITPTVQNYCVILHVLAWS 140
>ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 846
Score = 91.7 bits (226), Expect = 1e-16
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +3
Query: 30 EIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWSQE 209
+ + +LPHLG HEISRVL R QS SAL FFNWVKNDL ++ NYC+I+HIL W+Q
Sbjct: 94 QFKTILPHLGAHEISRVLIRTQSDASSALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQI 153
Query: 210 FALSMKFLTEL 242
F +MK L EL
Sbjct: 154 FDQAMKLLCEL 164
>ref|XP_006350584.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like isoform X1 [Solanum tuberosum]
gi|565367885|ref|XP_006350585.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X2 [Solanum tuberosum]
gi|565367887|ref|XP_006350586.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X3 [Solanum tuberosum]
gi|565367889|ref|XP_006350587.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X4 [Solanum tuberosum]
gi|565367891|ref|XP_006350588.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g40400-like isoform X5 [Solanum tuberosum]
Length = 629
Score = 90.5 bits (223), Expect = 2e-16
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Frame = +3
Query: 42 VLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILAWSQEFALS 221
++ + EISRVL RCQS SAL+FFNWVKNDLG+ P N C++IHIL W++ F+ +
Sbjct: 94 LISYFSDSEISRVLLRCQSDSCSALSFFNWVKNDLGVEPNTRNCCLVIHILTWTRNFSQA 153
Query: 222 MKFLTELAS---DECPSTAVFQNL 284
MKFL+EL + D S VF++L
Sbjct: 154 MKFLSELVNLKRDGMESVDVFESL 177
>ref|XP_006405498.1| hypothetical protein EUTSA_v10027688mg [Eutrema salsugineum]
gi|557106636|gb|ESQ46951.1| hypothetical protein
EUTSA_v10027688mg [Eutrema salsugineum]
Length = 613
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = +3
Query: 15 TSLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHIL 194
++ +E++ ++PHLG EISRVL R QS AL FFNWVK DLG RP ++NYC+++H+L
Sbjct: 69 SNFRDEVKSLIPHLGDREISRVLLRFQSDAPRALAFFNWVKFDLGKRPNVNNYCLLLHVL 128
Query: 195 AWSQEFALSMKFLTE 239
A S++F L+M+FL E
Sbjct: 129 ACSKKFPLAMQFLCE 143
>ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 608
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +3
Query: 18 SLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILA 197
+L +E++ ++PHLG EISRVL R QS AL FF WVK DLG RP + NYC+++HILA
Sbjct: 63 NLRDEVKSLIPHLGYPEISRVLLRFQSDASRALTFFKWVKFDLGKRPNVGNYCLLLHILA 122
Query: 198 WSQEFALSMKFLTEL 242
S++F L+M+FL EL
Sbjct: 123 SSKKFPLAMQFLCEL 137
>ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g40400 gi|10178151|dbj|BAB11596.1| salt-inducible
protein-like [Arabidopsis thaliana]
gi|110742507|dbj|BAE99171.1| hypothetical protein
[Arabidopsis thaliana] gi|332007160|gb|AED94543.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 610
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +3
Query: 18 SLHEEIQWVLPHLGTHEISRVLFRCQSSPFSALNFFNWVKNDLGLRPTIHNYCIIIHILA 197
+L +E++ ++PHLG EISRVL R QS A+ FF WVK DLG RP + NYC+++HIL
Sbjct: 65 NLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILV 124
Query: 198 WSQEFALSMKFLTEL 242
S++F L+M+FL EL
Sbjct: 125 SSKKFPLAMQFLCEL 139