BLASTX nr result
ID: Sinomenium21_contig00050190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00050190
(285 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007034248.1| ARM repeat superfamily protein, putative [Th... 86 4e-15
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 79 5e-13
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 79 5e-13
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 79 5e-13
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 79 8e-13
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 79 8e-13
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 77 2e-12
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 76 5e-12
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 75 7e-12
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 75 1e-11
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 71 1e-10
ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prun... 70 4e-10
ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prun... 69 9e-10
ref|XP_003601650.1| Small subunit processome component-like prot... 62 6e-08
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 61 2e-07
ref|XP_006284893.1| hypothetical protein CARUB_v10006185mg [Caps... 60 4e-07
ref|XP_006306568.1| hypothetical protein CARUB_v10008061mg, part... 59 7e-07
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 58 2e-06
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 58 2e-06
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 57 2e-06
>ref|XP_007034248.1| ARM repeat superfamily protein, putative [Theobroma cacao]
gi|508713277|gb|EOY05174.1| ARM repeat superfamily
protein, putative [Theobroma cacao]
Length = 2725
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/89 (50%), Positives = 64/89 (71%)
Frame = +2
Query: 14 PIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEKL 193
P+FEL N SLL+F++ELLL+DP + F + ILSA+N V SS++EVI LL+ F E+L
Sbjct: 410 PVFELGNSSLLTFLRELLLKDPSVIYIFRDHILSAMNDLV--ESSSEEVICLLLSFFERL 467
Query: 194 QVNKQSPRRLDGISENKFSRICNFMREYI 280
Q++ QS LDGISE + ++IC +M+ I
Sbjct: 468 QMHPQSSNFLDGISEGRLAKICYYMQGVI 496
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/90 (48%), Positives = 58/90 (64%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP FEL+N SLL FI +LL DPC+ TF ILSAIN + +S DEVI LL+ F +K
Sbjct: 12 APAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMI--ENSQDEVICLLLSFFDK 69
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
LQ+ + LDG+SE + RI F++E +
Sbjct: 70 LQMEPECCNFLDGVSEGRVLRIRGFLQEAV 99
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/90 (48%), Positives = 58/90 (64%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP FEL+N SLL FI +LL DPC+ TF ILSAIN + +S DEVI LL+ F +K
Sbjct: 409 APAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMI--ENSQDEVICLLLSFFDK 466
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
LQ+ + LDG+SE + RI F++E +
Sbjct: 467 LQMEPECCNFLDGVSEGRVLRIRGFLQEAV 496
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/90 (48%), Positives = 58/90 (64%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP FEL+N SLL FI +LL DPC+ TF ILSAIN + +S DEVI LL+ F +K
Sbjct: 409 APAFELKNSSLLKFIGKLLQLDPCVVYTFRVNILSAINDMI--ENSQDEVICLLLSFFDK 466
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
LQ+ + LDG+SE + RI F++E +
Sbjct: 467 LQMEPECCNFLDGVSEGRVLRIRGFLQEAV 496
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP FELRN SLL+FIK LL +DP + TF ILSA+N + +S +EVI+L++ F E+
Sbjct: 182 APAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLI--ETSPEEVIFLMLMFNER 239
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMRE 274
LQV+ QS L SE SRIC+F++E
Sbjct: 240 LQVDMQSSSFLVEASEEGVSRICSFLQE 267
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 78.6 bits (192), Expect = 8e-13
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP FELRN SLL+FIK LL +DP + TF ILSA+N + +S +EVI+L++ F E+
Sbjct: 411 APAFELRNPSLLNFIKSLLSKDPYMVYTFRINILSAMNSLI--ETSPEEVIFLMLMFNER 468
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMRE 274
LQV+ QS L SE SRIC+F++E
Sbjct: 469 LQVDMQSSSFLVEASEEGVSRICSFLQE 496
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/90 (47%), Positives = 57/90 (63%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP FEL+N S L FI +LL DPC+ TF ILSAIN + +S DEVI LL+ F +K
Sbjct: 409 APAFELKNSSSLKFIGKLLQLDPCVVYTFRVNILSAINDMI--ENSQDEVICLLLSFFDK 466
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
LQ+ + LDG+SE + RI F++E +
Sbjct: 467 LQMEPECCNFLDGVSEGRVLRIRGFLQEAV 496
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 75.9 bits (185), Expect = 5e-12
Identities = 43/90 (47%), Positives = 59/90 (65%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP+F+LRNKSLLSF+++LLL+DPCI F I+SA+N + S +EVI+LL F ++
Sbjct: 411 APVFDLRNKSLLSFVEDLLLKDPCIVHFFRASIISALNDMI--EISEEEVIHLLQIFFKR 468
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
L Q LD + K SRI +F+RE I
Sbjct: 469 LPA--QGHSFLDEVPNEKLSRIRSFLREAI 496
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 75.5 bits (184), Expect = 7e-12
Identities = 43/90 (47%), Positives = 59/90 (65%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP+F+LRNKSLLSF+++LLL+DPCI F I+SA+N + S +EVI+LL F ++
Sbjct: 398 APVFDLRNKSLLSFVEDLLLKDPCIVHFFRASIISALNDMI--EISEEEVIHLLQIFFKR 455
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
L Q LD + K SRI +F+RE I
Sbjct: 456 LPA--QGHSFLDEVPNEKLSRIHSFLREGI 483
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/90 (43%), Positives = 58/90 (64%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP F+LRN S+L+F EL+ RDPCI F ILSA+N + +S E+++LL+ F EK
Sbjct: 301 APAFKLRNSSILTFSSELMKRDPCILYEFRANILSAMNDLI--ETSQKEIVFLLLTFCEK 358
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
LQ++ LDG E ++SRI F+++ +
Sbjct: 359 LQMDPLRSIFLDGSPEGRYSRITGFLQQTV 388
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/87 (47%), Positives = 53/87 (60%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP+F LRN S L+FI+ELL +D CI F ILSA+N + +S EV+ LLM F E+
Sbjct: 397 APVFALRNSSCLTFIRELLAKDTCIVHAFRVNILSAMNDLM--ETSQKEVVCLLMSFCER 454
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMR 271
LQ + LDG SE SRI F++
Sbjct: 455 LQEDSLGSGFLDGTSEEGLSRIRGFLK 481
>ref|XP_007214892.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
gi|462411042|gb|EMJ16091.1| hypothetical protein
PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/87 (47%), Positives = 55/87 (63%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP+F+L+N SLL FI++LL +D C+ D F IL A+N + +S ++VIYLL+ F EK
Sbjct: 411 APVFDLKNSSLLGFIRQLLQKDVCVLDIFRVNILRAMNDLI--ETSQEDVIYLLLTFNEK 468
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMR 271
LQ+ QS LD E RI FMR
Sbjct: 469 LQMETQSLTFLDRTREG-VPRIQGFMR 494
>ref|XP_007216149.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
gi|462412299|gb|EMJ17348.1| hypothetical protein
PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 68.6 bits (166), Expect = 9e-10
Identities = 42/87 (48%), Positives = 55/87 (63%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP+F+L+N SLL FI++LL +D CI D F IL A+N + +S ++VIYLL+ F EK
Sbjct: 403 APVFDLKNSSLLGFIRQLLQKDVCILDIFAVNILRAMNDLL--ETSQEDVIYLLLTFNEK 460
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMR 271
LQ+ QS LD E RI FMR
Sbjct: 461 LQMETQSLTFLDRTREG-VPRIQGFMR 486
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago
truncatula] gi|355490698|gb|AES71901.1| Small subunit
processome component-like protein [Medicago truncatula]
Length = 2733
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
APIF+ R+ SLL FI++LL +D C+ F ++SAIN + S ++VI L F EK
Sbjct: 424 APIFKSRSSSLLRFIEKLLQKDLCLF-AFRSKVISAINELMEISE--EKVIQLFQSFCEK 480
Query: 191 LQVNKQSPRRLDGISENKFSRICNFM 268
+Q++ + P LD SE +RICN +
Sbjct: 481 MQLDIRGPDFLDRESEEALARICNHL 506
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/95 (41%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 VFEAP-IFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMK 178
+FE+P IF+ + SLL FI+ELL + C+ F ++SA+N + S +EVI+LL
Sbjct: 412 IFESPPIFKSASSSLLRFIRELLQENLCLLH-FRRNVISAMNDLMEISE--EEVIHLLRS 468
Query: 179 FLEKLQVNKQSPRRLDGISEN-KFSRICNFMREYI 280
F EK+Q++KQ+ +DG SE +RIC+ ++E I
Sbjct: 469 FCEKMQLDKQNSDFVDGTSEEAPLTRICSRLQEII 503
>ref|XP_006284893.1| hypothetical protein CARUB_v10006185mg [Capsella rubella]
gi|482553598|gb|EOA17791.1| hypothetical protein
CARUB_v10006185mg [Capsella rubella]
Length = 2598
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
APIF L++ SLL+F++E L +D + F ILSAIN + S +EVI LL+K E
Sbjct: 402 APIFALKSSSLLTFLREFLQKDQSVVKAFTNNILSAINNMIW--ESPEEVIPLLLKLCES 459
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMRE 274
Q ++ + E+K+ RI +F+ E
Sbjct: 460 QQTSRDGVNIITQTFESKYERIHSFLEE 487
>ref|XP_006306568.1| hypothetical protein CARUB_v10008061mg, partial [Capsella rubella]
gi|482575279|gb|EOA39466.1| hypothetical protein
CARUB_v10008061mg, partial [Capsella rubella]
Length = 2505
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
APIF L++ SLL F++ELL +D I TF ILSAIN + SS ++VI LL+ E
Sbjct: 265 APIFSLKSSSLLIFLRELLQKDRLIVKTFTNDILSAINNMIWESS--EDVIPLLLSLCES 322
Query: 191 LQVNKQSPRRLDGISENKFSRICNFMREYI 280
Q + + + E+++ RI F+ E I
Sbjct: 323 QQTSHDKVNIVAELFESRYERIHEFLEENI 352
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component
20 homolog, partial [Cucumis sativus]
Length = 2538
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
APIF+L N SLL+F++E++ +D + F IL +N SS +EVIYLL+ F E+
Sbjct: 295 APIFQLNNSSLLTFVREVMEKDTSVLCAFRTNILRVMNE--SLESSPEEVIYLLLSFSER 352
Query: 191 LQVNKQSPRRLDGISENKFSRICNFM 268
L P + G SE + +I NF+
Sbjct: 353 L------PTEVLGTSEEEIPKINNFI 372
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
APIF+L N SLL+F++E++ +D + F IL +N SS +EVIYLL+ F E+
Sbjct: 427 APIFQLNNSSLLTFVREVMEKDTSVLCAFRTNILRVMNE--SLESSPEEVIYLLLSFSER 484
Query: 191 LQVNKQSPRRLDGISENKFSRICNFM 268
L P + G SE + +I NF+
Sbjct: 485 L------PTEVLGTSEEEIPKINNFI 504
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +2
Query: 11 APIFELRNKSLLSFIKELLLRDPCISDTFHELILSAINRFVGASSSADEVIYLLMKFLEK 190
AP+F+LR+ SLL FI++LL +D C+ F ++SAIN + S +EVI LL F EK
Sbjct: 409 APVFKLRSSSLLRFIEKLLQKDLCLL-AFRSNVISAINELM--EISEEEVIQLLQSFSEK 465
Query: 191 LQVNKQSPRRLDGISENKFSRICN 262
+Q++ + +D S +RIC+
Sbjct: 466 VQLDIRKSDFVDRESAEALTRICH 489