BLASTX nr result

ID: Sinomenium21_contig00050099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00050099
         (364 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containi...    49   5e-07

>ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Glycine max]
          Length = 711

 Score = 49.3 bits (116), Expect(2) = 5e-07
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = -1

Query: 124 KQELDIEDPLVRFFKSRSETASEDPGKEGRKLLQKNR 14
           +QE D +DP+ +FFK+R+  +S+DPGKEG+  LQKNR
Sbjct: 89  EQEHDPDDPIYKFFKTRTRFSSQDPGKEGKLSLQKNR 125



 Score = 30.0 bits (66), Expect(2) = 5e-07
 Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
 Frame = -2

Query: 198 VCYCLSPTT----APTPLFHPFLQGED*QNK 118
           +C C SP+     +PTP+F P+LQ ++ +N+
Sbjct: 45  LCLCASPSNTSHPSPTPIFLPYLQQQEPENR 75


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