BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00050093
         (306 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   135   6e-30
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            132   4e-29
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           129   6e-28
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         127   2e-27
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   122   7e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   122   7e-26
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           121   1e-25
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   120   2e-25
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]      117   2e-24
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]   115   6e-24
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]   114   1e-23
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]   114   1e-23
emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]   114   1e-23
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    113   2e-23
emb|CAN81756.1| hypothetical protein VITISV_020923 [Vitis vinifera]   113   3e-23
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]   113   3e-23
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]   112   7e-23
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]   112   7e-23
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   111   9e-23
gb|AFB73912.1| polyprotein [Citrus sinensis]                          111   9e-23

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  135 bits (340), Expect = 6e-30
 Identities = 72/103 (69%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
            I KLK  L KSFDMKDLGPAQQIL M+I R+R S K WLSQEKYIERVLERFNM+ +K V
Sbjct: 1022 IAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPV 1081

Query: 128  STPLANHFKLSKKQCP-PMDVRTEIVDIPYFSAVGSLMYAMVC 3
            STPLA H KLSKK CP  ++ +  +  +PY SAVGSLMYAMVC
Sbjct: 1082 STPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVC 1124


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  132 bits (333), Expect = 4e-29
 Identities = 71/103 (68%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
           I +LKE L KSFDMKDLGPA+QIL M+I RDRK+ K WLSQE YIERVLERFNM+ +K V
Sbjct: 382 ICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPV 441

Query: 128 STPLANHFKLSKKQCPPMDVRTEIVD-IPYFSAVGSLMYAMVC 3
           +TPLA HFKLSK+ CP  +   E +  IPY S VGSLMYAMVC
Sbjct: 442 NTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVC 484


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  129 bits (323), Expect = 6e-28
 Identities = 70/103 (67%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I  LKE L K F MKDLGPA+QIL M+I RDR++K  WLSQEKYIE+VL+RFNM+ +KAV
Sbjct: 1023 INSLKEQLSKFFAMKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAV 1082

Query: 128  STPLANHFKLSKKQCPPM-DVRTEIVDIPYFSAVGSLMYAMVC 3
            S PLANHF+LS KQ P   D R ++  IPY SAVGSLMYAMVC
Sbjct: 1083 SCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVC 1125


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/103 (65%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I +LK+ L KSF MKD+GPA+QIL M+I RDR++K  WLSQEKYIE+VLERF+M  +K V
Sbjct: 1020 IQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPV 1079

Query: 128  STPLANHFKLSKKQCPPMD-VRTEIVDIPYFSAVGSLMYAMVC 3
            STPL  HFKL KKQCP  +  + E+  +PY SAVGSLMYAMVC
Sbjct: 1080 STPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVC 1122


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  122 bits (305), Expect = 7e-26
 Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I KLK+ L   FDMKDLG A++IL M+I+RDRKS   +LSQ  YI++VL+RFNMQ +KAV
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1087

Query: 128  STPLANHFKLSKKQCPPMDVRTEIVD-IPYFSAVGSLMYAMVC 3
            STP+A HFKLS  QCP +D   E +  +PY SAVGSLMYAMVC
Sbjct: 1088 STPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVC 1130


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  122 bits (305), Expect = 7e-26
 Identities = 65/103 (63%), Positives = 79/103 (76%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I KLK+ L   FDMKDLG A++IL M+I+RDRKS   +LSQ  YI++VL+RFNMQ +KAV
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1087

Query: 128  STPLANHFKLSKKQCPPMDVRTEIVD-IPYFSAVGSLMYAMVC 3
            STP+A HFKLS  QCP +D   E +  +PY SAVGSLMYAMVC
Sbjct: 1088 STPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVC 1130


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  121 bits (303), Expect = 1e-25
 Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I KLK+ L   FDMKDLG A++IL M+I+RDRKS   +LSQ  YI++VL+RFNMQ +KAV
Sbjct: 1030 ITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1089

Query: 128  STPLANHFKLSKKQCPPMDVRTEIVD-IPYFSAVGSLMYAMVC 3
            STP+A HFKLS  QCP  D   E +  +PY SAVGSLMYAMVC
Sbjct: 1090 STPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVC 1132


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  120 bits (301), Expect = 2e-25
 Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I KLK+ L   FDMKDLG A++IL M+I+RDRKS   +LSQ  YI++VL+RFNMQ +KAV
Sbjct: 1028 ITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAV 1087

Query: 128  STPLANHFKLSKKQCPPMDVRTEIVD-IPYFSAVGSLMYAMVC 3
            STP+A HFKLS  QCP  D   E +  +PY SAVGSLMYAMVC
Sbjct: 1088 STPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVC 1130


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  117 bits (293), Expect = 2e-24
 Identities = 61/103 (59%), Positives = 79/103 (76%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
            I +LK+ L +SF MKD+G A+QIL ++I RDR+ K  WLSQE Y++RVL+RF M+ +K V
Sbjct: 966  INRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVV 1025

Query: 128  STPLANHFKLSKKQCPPMDV-RTEIVDIPYFSAVGSLMYAMVC 3
            STPLA HFKLS KQ P  +  ++++  IPY SAVGSLMYAMVC
Sbjct: 1026 STPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVC 1068


>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
          Length = 726

 Score =  115 bits (288), Expect = 6e-24
 Identities = 59/103 (57%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
           + KLK  L K FDMKDLG  ++IL M+I RDR S + WLSQ  Y+++VLERFNM  +K V
Sbjct: 480 VNKLKSLLRKEFDMKDLGATKKILGMEIHRDRASGRLWLSQYSYVKKVLERFNMDDAKPV 539

Query: 128 STPLANHFKLSKKQCPPMDVRT-EIVDIPYFSAVGSLMYAMVC 3
           STPLANHF+LS  QCP  +    ++  +PY SA+G LMYAMVC
Sbjct: 540 STPLANHFRLSTNQCPKTBDEVKDMSKVPYASAMGCLMYAMVC 582


>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
          Length = 406

 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRK-SKSWLSQEKYIERVLERFNMQGSKAV 129
           + KLK  L K FDMKDLG  ++I+ ++I RDR   + WLSQ  Y++R+LERFNM  +K V
Sbjct: 103 VNKLKSLLSKEFDMKDLGVTKKIIGIEIHRDRALGRLWLSQHNYVKRMLERFNMDNAKPV 162

Query: 128 STPLANHFKLSKKQCPPMDVR-TEIVDIPYFSAVGSLMYAMVC 3
           STPLANHF+LS  QCP  D    ++  +PY SAVG LMYAMVC
Sbjct: 163 STPLANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVC 205


>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
          Length = 367

 Score =  114 bits (286), Expect = 1e-23
 Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRK-SKSWLSQEKYIERVLERFNMQGSKAV 129
           + KLK  L K FDMKDLG  ++IL M+I  DR   + WLSQ  Y++R+LERFNM  +K V
Sbjct: 103 VNKLKSLLSKEFDMKDLGATKKILGMEIHGDRALGRLWLSQHNYVKRMLERFNMDNAKPV 162

Query: 128 STPLANHFKLSKKQCPPMDVR-TEIVDIPYFSAVGSLMYAMVC 3
           STPLANHF+LS  QCP  D    ++  +PY SAVG LMYAMVC
Sbjct: 163 STPLANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVC 205


>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
          Length = 384

 Score =  114 bits (285), Expect = 1e-23
 Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
           I KLK  L KSF MKDLG A+QIL M+I+ DRK+ K WLSQE YIE++LERFN+  +K V
Sbjct: 190 IEKLKRELSKSFAMKDLGYAKQILGMKISHDRKNEKLWLSQEAYIEKILERFNISKAKIV 249

Query: 128 STPLANHFKLSKKQCPPMDVRT-EIVDIPYFSAVGSLMYAMVC 3
            +PLA HFKL  KQCP  +    E+  +PY S VG+LM+AMVC
Sbjct: 250 GSPLAGHFKLISKQCPTSEKENEEMSKVPYSSVVGNLMHAMVC 292


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  113 bits (283), Expect = 2e-23
 Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKSWLSQEKYIERVLERFNMQGSKAVS 126
            I KL++   KSFDMKDLGPA+QIL M+I R+ + K  LS EKYIERVLERFNM+ +K +S
Sbjct: 1023 IAKLRKDFSKSFDMKDLGPAKQILGMKIAREEQKKLGLSHEKYIERVLERFNMKSAKPIS 1082

Query: 125  TPLANHFKLSKKQCP--PMDVRTEIVDIPYFSAVGSLMYAMVC 3
            TPL ++ KL+K+  P      + ++  +PY SAVGS MYAMVC
Sbjct: 1083 TPLVSYLKLTKQMFPTKKKGEKGDMAKVPYSSAVGSFMYAMVC 1125


>emb|CAN81756.1| hypothetical protein VITISV_020923 [Vitis vinifera]
          Length = 256

 Score =  113 bits (282), Expect = 3e-23
 Identities = 61/103 (59%), Positives = 77/103 (74%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
           I KLK+ L KSF+MKDLGPA QILS++I +DR + K WLSQE Y+E+VL++FNM  +K V
Sbjct: 31  IDKLKKELSKSFEMKDLGPASQILSIKIFQDRTNVKLWLSQESYMEKVLDKFNMGKAKPV 90

Query: 128 STPLANHFKLSKKQCPPMD-VRTEIVDIPYFSAVGSLMYAMVC 3
           S PL +H KLS KQ P  +  + E+  +PY SAVGSLMY MVC
Sbjct: 91  SYPLRSHLKLSSKQSPSSEKEKEEMRKVPYASAVGSLMYVMVC 133


>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
          Length = 815

 Score =  113 bits (282), Expect = 3e-23
 Identities = 59/105 (56%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
           +  LK  L K FD+KDLG  ++IL M+I RDR S+  WLSQ  Y++RVLERFNM  +K +
Sbjct: 551 VNNLKSLLSKEFDIKDLGATKKILGMEIHRDRASRRLWLSQHSYVKRVLERFNMDDAKPL 610

Query: 128 STPLANHFKLSKKQCPPMDVRTEIVD---IPYFSAVGSLMYAMVC 3
           STPLANHF+LS  QCP +D   E+ D   +PY + VG LMYAMVC
Sbjct: 611 STPLANHFRLSTNQCPKID--DEVKDTSKVPYATTVGCLMYAMVC 653


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score =  112 bits (279), Expect = 7e-23
 Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
           + KLK  L K FDMK+L  A++I+ M+I RDR S+  WLSQ  Y++RV ERFNM  +K V
Sbjct: 374 VNKLKSLLSKEFDMKELDAAKKIIGMEIHRDRASRRLWLSQYSYVKRVFERFNMDDAKPV 433

Query: 128 STPLANHFKLSKKQCPPMDVRT-EIVDIPYFSAVGSLMYAMVC 3
           STPLANHF+LS  QCP  +    ++  +PY SAVG  MYAMVC
Sbjct: 434 STPLANHFRLSTNQCPKTBDEVKDMSKVPYASAVGCFMYAMVC 476


>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score =  112 bits (279), Expect = 7e-23
 Identities = 60/103 (58%), Positives = 78/103 (75%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305 IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKSKS-WLSQEKYIERVLERFNMQGSKAV 129
           I KLK+ L KSF MKDLGP ++IL ++I RDR SK  ++SQE+YIE+VLERFNM  +K V
Sbjct: 501 IDKLKKQLSKSFSMKDLGPVKKILGIRIERDRASKKLYMSQEQYIEKVLERFNMSKAKVV 560

Query: 128 STPLANHFKLSKKQCPPMDVRTE-IVDIPYFSAVGSLMYAMVC 3
           ++PLA+HFKLS++  P +D   E +  +PY SAVGSLM  MVC
Sbjct: 561 NSPLASHFKLSRRHSPSIDKEKEDMRRVPYASAVGSLMNPMVC 603


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  111 bits (278), Expect = 9e-23
 Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
            I KLK  L   F+MKDLG A++IL M+ITR R S K +LSQ+ YIE+VL RFNM  +K V
Sbjct: 1234 IAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPV 1293

Query: 128  STPLANHFKLSKKQCPPMDVRTEIVD-IPYFSAVGSLMYAMVC 3
            STPLA HF+LS   CP  D   E +  +PY SAVGSLMYAMVC
Sbjct: 1294 STPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVC 1336


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  111 bits (278), Expect = 9e-23
 Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
 Frame = -2

Query: 305  IGKLKE*LFKSFDMKDLGPAQQILSMQITRDRKS-KSWLSQEKYIERVLERFNMQGSKAV 129
            I +LK  L + F+MKDLGPA +IL MQI RDR + K WLSQ+ Y++++L RFNMQ  K++
Sbjct: 1003 IQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSI 1062

Query: 128  STPLANHFKLSKKQCPPMDV-RTEIVDIPYFSAVGSLMYAMVC 3
            STPL  +FKLS   CP  +  R E+  +PY SAVGSLM+AM+C
Sbjct: 1063 STPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMIC 1105