BLASTX nr result
ID: Sinomenium21_contig00049904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00049904
(386 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37517.3| unnamed protein product [Vitis vinifera] 138 9e-31
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ... 138 9e-31
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 132 5e-29
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F... 129 3e-28
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu... 129 4e-28
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 126 3e-27
ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The... 125 5e-27
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 125 6e-27
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca... 124 1e-26
ref|XP_004171180.1| PREDICTED: DNA topoisomerase 3-alpha-like, p... 124 1e-26
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 124 1e-26
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S... 121 1e-25
ref|XP_007214290.1| hypothetical protein PRUPE_ppb010436mg [Prun... 117 1e-24
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 115 5e-24
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 115 5e-24
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 115 5e-24
ref|XP_007137779.1| hypothetical protein PHAVU_009G154900g, part... 113 2e-23
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric... 113 3e-23
ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutr... 107 2e-21
ref|XP_003602652.1| DNA topoisomerase [Medicago truncatula] gi|3... 106 4e-21
>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 138 bits (347), Expect = 9e-31
Identities = 64/105 (60%), Positives = 78/105 (74%)
Frame = -2
Query: 379 SSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTC 200
SS NAQ ++TR C+HC QTGHSS+DCPS S+N Q R N S GE+SIPC+ C
Sbjct: 419 SSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPS---GESSIPCNVC 475
Query: 199 SAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTRGSA 65
PCILRTANT NN GRKFYSCQS+ECNFFVWED++++++ SA
Sbjct: 476 GTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSA 520
>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
Length = 914
Score = 138 bits (347), Expect = 9e-31
Identities = 64/105 (60%), Positives = 78/105 (74%)
Frame = -2
Query: 379 SSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTC 200
SS NAQ ++TR C+HC QTGHSS+DCPS S+N Q R N S GE+SIPC+ C
Sbjct: 744 SSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPRSRNSQSHRTNMPS---GESSIPCNVC 800
Query: 199 SAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTRGSA 65
PCILRTANT NN GRKFYSCQS+ECNFFVWED++++++ SA
Sbjct: 801 GTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLNSSSGGRSA 845
>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
Length = 920
Score = 132 bits (332), Expect = 5e-29
Identities = 58/106 (54%), Positives = 79/106 (74%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T S+GNA + R A CM+C++TGHSS+DCPS T+ S+N + + N + +GE S+ C+
Sbjct: 747 TTSTGNAHHTNPRQAVCMNCQETGHSSNDCPSQTLRSRNAR-QHGNVMNQQSGEASVSCN 805
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTRGS 68
+C PC+LRTANTANN GRKFYSC S+ECNFFVWED++++ GS
Sbjct: 806 SCGTPCVLRTANTANNRGRKFYSCPSQECNFFVWEDDLNSGTGGGS 851
>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
vesca]
Length = 908
Score = 129 bits (325), Expect = 3e-28
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = -2
Query: 379 SSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTC 200
+S N Q +TR C++C Q+GHSS DCPS + ++++PR N+QS GE S+ C+TC
Sbjct: 744 TSSNVQQNNTRQGACIYCHQSGHSSGDCPSQSSGPRSVRPRTMNAQS---GEISVSCTTC 800
Query: 199 SAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNN 80
APC+LRTANT N GRKFY C S+ECNFFVWEDN+S N
Sbjct: 801 GAPCVLRTANTTQNRGRKFYKCPSQECNFFVWEDNVSNGN 840
>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
gi|222856496|gb|EEE94043.1| hypothetical protein
POPTR_0005s06810g [Populus trichocarpa]
Length = 910
Score = 129 bits (324), Expect = 4e-28
Identities = 58/107 (54%), Positives = 76/107 (71%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T + N Q +++R A C++C QTGH+S DCPS ++++Q N Q+ GE+SIPCS
Sbjct: 743 TTTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRISATRHVQSHGMNQQN---GESSIPCS 799
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTRGSA 65
TC PC+LRTANTANN GRKFYSC S+ CNFFVWEDN++ + SA
Sbjct: 800 TCGTPCVLRTANTANNRGRKFYSCSSQACNFFVWEDNLNNGSAPRSA 846
>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
Length = 915
Score = 126 bits (317), Expect = 3e-27
Identities = 58/99 (58%), Positives = 73/99 (73%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T SS +G S ++C +CRQTGH S+DCPS Q + R +Q + GE+SIPC+
Sbjct: 757 TASSSAQRGNSRAQSSCAYCRQTGHLSNDCPS-----QASRGRTARAQEVDNGESSIPCN 811
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNIS 89
+C APCILRTANTANN GRKF+SCQS+ECNFFVWEDN++
Sbjct: 812 SCGAPCILRTANTANNRGRKFFSCQSQECNFFVWEDNLN 850
>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
2, partial [Theobroma cacao]
Length = 845
Score = 125 bits (315), Expect = 5e-27
Identities = 57/96 (59%), Positives = 71/96 (73%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T +S N Q S+R C++C+QTGHSS+DCPS S+N + R +SQ+ GE S+ CS
Sbjct: 746 TTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSGSRNSRSRT-SSQNGMQGEPSVSCS 804
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWED 98
TC PC+LRTANTANN GRKFYSC S+ECNFF+WED
Sbjct: 805 TCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWED 840
>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
Length = 940
Score = 125 bits (314), Expect = 6e-27
Identities = 60/104 (57%), Positives = 73/104 (70%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T SS N Q ++ R C++C+Q GHSS DCPS S+N + N QS GE+SI C+
Sbjct: 775 TASSNNGQQSNHRQRACIYCQQMGHSSSDCPSQFSGSRNARANGMNPQS---GESSIQCT 831
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTR 74
TC PC+LRTANTANN GRKFYSC S+ECNFFVWED+ + N TR
Sbjct: 832 TCGTPCVLRTANTANNRGRKFYSCSSQECNFFVWEDD-AKNGTR 874
>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
1 [Theobroma cacao]
Length = 914
Score = 124 bits (311), Expect = 1e-26
Identities = 59/105 (56%), Positives = 71/105 (67%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T +S N Q S+R C++C+QTGHSS+DCPS S+N R+ S GE S+ CS
Sbjct: 746 TTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSGSRN----SRSRTSSQNGEPSVSCS 801
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTRG 71
TC PC+LRTANTANN GRKFYSC S+ECNFF+WED N T G
Sbjct: 802 TCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDE-HNNGTGG 845
>ref|XP_004171180.1| PREDICTED: DNA topoisomerase 3-alpha-like, partial [Cucumis
sativus]
Length = 257
Score = 124 bits (311), Expect = 1e-26
Identities = 55/100 (55%), Positives = 72/100 (72%)
Frame = -2
Query: 379 SSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTC 200
SS N Q + + C+ C+Q GHSS+DCPS +V S++ Q R+ +GE+S+ CS+C
Sbjct: 81 SSSNVQRDNPGQSVCIFCQQVGHSSNDCPSQSVGSRSAQRRQ-------SGESSVSCSSC 133
Query: 199 SAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNN 80
+PC+LRTANTANN GRKFY CQS+ECNFFVWEDN+ N
Sbjct: 134 GSPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGN 173
>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
Length = 925
Score = 124 bits (311), Expect = 1e-26
Identities = 55/100 (55%), Positives = 72/100 (72%)
Frame = -2
Query: 379 SSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTC 200
SS N Q + + C+ C+Q GHSS+DCPS +V S++ Q R+ +GE+S+ CS+C
Sbjct: 749 SSSNVQRDNPGQSVCIFCQQVGHSSNDCPSQSVGSRSAQRRQ-------SGESSVSCSSC 801
Query: 199 SAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNN 80
+PC+LRTANTANN GRKFY CQS+ECNFFVWEDN+ N
Sbjct: 802 GSPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGN 841
>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
Length = 910
Score = 121 bits (303), Expect = 1e-25
Identities = 56/99 (56%), Positives = 70/99 (70%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T S + S ++C +CRQTGH S+DCPS Q + R +Q + GE+S+PC+
Sbjct: 752 TAFSSAQRDNSRAQSSCAYCRQTGHLSNDCPS-----QASRDRTARAQEVDNGESSMPCN 806
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNIS 89
+C APCILRTANTANN GRKF+SCQS ECNFFVWEDN+S
Sbjct: 807 SCGAPCILRTANTANNRGRKFFSCQSSECNFFVWEDNLS 845
>ref|XP_007214290.1| hypothetical protein PRUPE_ppb010436mg [Prunus persica]
gi|462410155|gb|EMJ15489.1| hypothetical protein
PRUPE_ppb010436mg [Prunus persica]
Length = 166
Score = 117 bits (294), Expect = 1e-24
Identities = 53/97 (54%), Positives = 67/97 (69%)
Frame = -2
Query: 370 NAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTCSAP 191
N Q ++TR C++C QTGHSS +CPS + ++ +P+ N QS G+ SI CS C AP
Sbjct: 4 NVQRSNTRQGACIYCHQTGHSSGNCPSQSSGPRSSRPQSMNVQS---GQVSISCSACGAP 60
Query: 190 CILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNN 80
C RTANT N GRKFYSCQS+ CNFFVWED+I+ N
Sbjct: 61 CTSRTANTTTNRGRKFYSCQSQACNFFVWEDSINNGN 97
>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
Length = 885
Score = 115 bits (289), Expect = 5e-24
Identities = 53/99 (53%), Positives = 67/99 (67%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T + NA + R CM+CR+TGHSS DCP + N+Q + S GE S+ CS
Sbjct: 719 TAPTSNAHHTNPRQGACMNCRETGHSSTDCP---LRYGNVQ---HHGTSEHNGEASVSCS 772
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNIS 89
+C PC+LRTANT NN GRKFYSCQS+ECNFFVWED+++
Sbjct: 773 SCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLN 811
>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
Length = 910
Score = 115 bits (289), Expect = 5e-24
Identities = 53/99 (53%), Positives = 67/99 (67%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T + NA + R CM+CR+TGHSS DCP + N+Q + S GE S+ CS
Sbjct: 744 TAPTSNAHHTNPRQGACMNCRETGHSSTDCP---LRYGNVQ---HHGTSEHNGEASVSCS 797
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNIS 89
+C PC+LRTANT NN GRKFYSCQS+ECNFFVWED+++
Sbjct: 798 SCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLN 836
>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
topoisomerase 3-alpha isoform X2 [Glycine max]
Length = 913
Score = 115 bits (289), Expect = 5e-24
Identities = 53/99 (53%), Positives = 67/99 (67%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T + NA + R CM+CR+TGHSS DCP + N+Q + S GE S+ CS
Sbjct: 747 TAPTSNAHHTNPRQGACMNCRETGHSSTDCP---LRYGNVQ---HHGTSEHNGEASVSCS 800
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNIS 89
+C PC+LRTANT NN GRKFYSCQS+ECNFFVWED+++
Sbjct: 801 SCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLN 839
>ref|XP_007137779.1| hypothetical protein PHAVU_009G154900g, partial [Phaseolus
vulgaris] gi|593328706|ref|XP_007137780.1| hypothetical
protein PHAVU_009G154900g, partial [Phaseolus vulgaris]
gi|561010866|gb|ESW09773.1| hypothetical protein
PHAVU_009G154900g, partial [Phaseolus vulgaris]
gi|561010867|gb|ESW09774.1| hypothetical protein
PHAVU_009G154900g, partial [Phaseolus vulgaris]
Length = 281
Score = 113 bits (283), Expect = 2e-23
Identities = 54/108 (50%), Positives = 73/108 (67%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T + N + R CM+C++TGHSS+DCP + S N++ R + + GE S+ CS
Sbjct: 115 TAPTSNGLHTNPRQRRCMNCQETGHSSNDCP---LRSGNVRHRGASEHN---GEASVSCS 168
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNISTNNTRGSAA 62
+C PC+LRTANTA N GRKFYSCQS+ECNFFVWED++ + T G +A
Sbjct: 169 SCGTPCVLRTANTATNRGRKFYSCQSQECNFFVWEDSLD-DGTGGRSA 215
>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223533243|gb|EEF34998.1| prokaryotic DNA
topoisomerase, putative [Ricinus communis]
Length = 833
Score = 113 bits (282), Expect = 3e-23
Identities = 51/87 (58%), Positives = 61/87 (70%)
Frame = -2
Query: 370 NAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCSTCSAP 191
N+Q ++TR ATC+HC QTGH+S DCP S+ +Q R N Q GE+S+ C TC P
Sbjct: 750 NSQQSNTRFATCVHCHQTGHASIDCPLQLSGSRRVQSRGTNEQM---GESSVTCGTCGTP 806
Query: 190 CILRTANTANNMGRKFYSCQSRECNFF 110
C LRTANTANN GRKFYSC S+ CNFF
Sbjct: 807 CALRTANTANNRGRKFYSCPSQSCNFF 833
>ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutrema salsugineum]
gi|557090866|gb|ESQ31513.1| hypothetical protein
EUTSA_v10003618mg [Eutrema salsugineum]
Length = 930
Score = 107 bits (267), Expect = 2e-21
Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Frame = -2
Query: 379 SSGNAQGASTRLA-TCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCST 203
SS N QG + R TC+HC+Q GH+S +CPS S+N PR + ET++ C+T
Sbjct: 752 SSNNFQGGNIRQNNTCIHCQQRGHTSANCPSRISGSRN--PRPTTGTNPGNDETTVSCNT 809
Query: 202 CSAPCILRTANTANNMGRKFYSCQSRECNFFVWEDNIST---NNTRGS 68
C PC LRTANT N GR+F+SC S+ CNFF WED+IS N T GS
Sbjct: 810 CGTPCALRTANTEANRGRRFFSCPSQGCNFFAWEDSISNGSGNATAGS 857
>ref|XP_003602652.1| DNA topoisomerase [Medicago truncatula] gi|355491700|gb|AES72903.1|
DNA topoisomerase [Medicago truncatula]
Length = 432
Score = 106 bits (264), Expect = 4e-21
Identities = 50/96 (52%), Positives = 65/96 (67%)
Frame = -2
Query: 385 TISSGNAQGASTRLATCMHCRQTGHSSDDCPSHTVHSQNIQPRRRNSQSIATGETSIPCS 206
T S+ NA + R A C HC++TGHSS+DCPS T S+N Q N Q+ GE+S+ CS
Sbjct: 237 TASTSNAHHTNPRQAVCSHCQETGHSSNDCPSQTRRSRNPQYPGMNQQN---GESSVACS 293
Query: 205 TCSAPCILRTANTANNMGRKFYSCQSRECNFFVWED 98
+C PC L+TANT +N GR FYSCQ++ C FFV E+
Sbjct: 294 SCGTPCGLQTANTDSNRGRDFYSCQTQGCRFFVLEE 329