BLASTX nr result
ID: Sinomenium21_contig00049762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00049762
(369 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 44 1e-13
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 41 5e-11
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 48 4e-10
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 40 6e-10
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi... 46 4e-09
gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japo... 46 4e-09
emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group] 46 4e-09
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi... 45 7e-09
ref|XP_007198897.1| hypothetical protein PRUPE_ppa015748mg, part... 37 2e-08
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 43 3e-08
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo... 45 3e-08
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 45 6e-08
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 45 6e-08
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 40 2e-07
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas... 40 4e-07
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 38 5e-07
ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, part... 41 6e-07
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun... 41 6e-07
ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein A... 40 6e-07
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 40 1e-06
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 43.9 bits (102), Expect(3) = 1e-13
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2
Query: 290 LFFVLILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LF +LS++L KAE + I G K+ + + +H FA DSL FC+AS
Sbjct: 1007 LFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRAS 1054
Score = 40.8 bits (94), Expect(3) = 1e-13
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NG K PS G+RQG+PLS + F+ CA+ LS
Sbjct: 980 LINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLS 1014
Score = 36.6 bits (83), Expect(3) = 1e-13
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 145 NFANLFHILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNMLGTD 2
N L I Y SG +IN+ KSSI F +K+ +R+ L +LG D
Sbjct: 1057 NIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGID 1104
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 40.8 bits (94), Expect(3) = 5e-11
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
ILNG+ TP+ GLRQG+ +S + F+LCA LS
Sbjct: 578 ILNGEPRGNHTPTRGLRQGDSISPYLFLLCAKGLS 612
Score = 36.6 bits (83), Expect(3) = 5e-11
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = -3
Query: 133 LFHILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNMLGTD 2
L HIL Y G +++F KSSI+FSR V + + L+++LG +
Sbjct: 659 LKHILQVYEEALGQQVHFQKSSISFSRNVAREAQDRLASLLGVE 702
Score = 34.7 bits (78), Expect(3) = 5e-11
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS +L+ AE I G + +PS H FFA DS +F +A
Sbjct: 611 LSRMLTYAEMRGGIHGVSIATGAPSINHLFFADDSFIFLRA 651
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 47.8 bits (112), Expect(2) = 4e-10
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = -2
Query: 290 LFFVLILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LF LS L AE S +I GF++ R PS +H FFA D+++FC+AS
Sbjct: 984 LFCAEGLSSALRAAEQSQSITGFRVTRRGPSISHLFFADDAMIFCEAS 1031
Score = 42.0 bits (97), Expect(2) = 4e-10
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NGD P GLRQG+PLS + F+ CA+ LS
Sbjct: 957 VINGDRVGLINPQRGLRQGDPLSPYLFLFCAEGLS 991
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 40.0 bits (92), Expect(3) = 6e-10
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LS ++ + + + GFK +R P+ +H FA DSL+FCKA+
Sbjct: 106 LSALIQASIKAKQLHGFKASRNGPAISHLLFAHDSLVFCKAT 147
Score = 38.9 bits (89), Expect(3) = 6e-10
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NG ++ P G+RQG+P+S + ++LC + LS
Sbjct: 73 LINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLS 107
Score = 29.6 bits (65), Expect(3) = 6e-10
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 133 LFHILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNMLG 8
L ++L Y SG +NF KS+I F + ++ + LS +LG
Sbjct: 154 LVNVLKLYEKASGQAVNFQKSAILFGKGLDFRTSEQLSQLLG 195
>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
Length = 1860
Score = 46.2 bits (108), Expect(2) = 4e-09
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG+L+ TPS GLRQG+P+S + F+LC + LS
Sbjct: 1393 INGELTNPVTPSRGLRQGDPISPYLFLLCTEGLS 1426
Score = 40.0 bits (92), Expect(2) = 4e-09
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS IL K ES IQG + R+ P +H FA DS+ F ++
Sbjct: 1425 LSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARS 1465
>gb|EAZ29765.1| hypothetical protein OsJ_13823 [Oryza sativa Japonica Group]
Length = 490
Score = 46.2 bits (108), Expect(2) = 4e-09
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG+L+ TPS GLRQG+P+S + F+LC + LS
Sbjct: 106 INGELTNPVTPSRGLRQGDPISPYLFLLCTEGLS 139
Score = 40.0 bits (92), Expect(2) = 4e-09
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS IL K ES IQG + R+ P +H FA DS+ F ++
Sbjct: 138 LSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARS 178
>emb|CAE01608.2| OSJNBa0052O21.12 [Oryza sativa Japonica Group]
Length = 427
Score = 46.2 bits (108), Expect(2) = 4e-09
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG+L+ TPS GLRQG+P+S + F+LC + LS
Sbjct: 43 INGELTNPVTPSRGLRQGDPISPYLFLLCTEGLS 76
Score = 40.0 bits (92), Expect(2) = 4e-09
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS IL K ES IQG + R+ P +H FA DS+ F ++
Sbjct: 75 LSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARS 115
>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
gi|222630794|gb|EEE62926.1| hypothetical protein
OsJ_17731 [Oryza sativa Japonica Group]
Length = 893
Score = 45.1 bits (105), Expect(3) = 7e-09
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NGDL+ + PS GLRQG+P+S + F++CA+ S
Sbjct: 294 VNGDLTDQIIPSRGLRQGDPISPYLFLICAEGFS 327
Score = 31.6 bits (70), Expect(3) = 7e-09
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 269 SHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
S +L AE + G K+ + +PS +H FA DSLL K +
Sbjct: 327 SSLLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKVN 367
Score = 28.1 bits (61), Expect(3) = 7e-09
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 133 LFHILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNML 11
L ++L Y SG +N KSSI FS+ + RK++ +L
Sbjct: 374 LQNVLNLYESCSGQIVNKDKSSIMFSKNTSQADRKMVMEIL 414
>ref|XP_007198897.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
gi|462394192|gb|EMJ00096.1| hypothetical protein
PRUPE_ppa015748mg, partial [Prunus persica]
Length = 949
Score = 36.6 bits (83), Expect(3) = 2e-08
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 233 IQGFKLNRISPSFAHQFFASDSLLFCKAS 147
+ G K++ SP +H FA DS+LFCKAS
Sbjct: 469 LHGIKVSSSSPPLSHLLFADDSILFCKAS 497
Score = 35.4 bits (80), Expect(3) = 2e-08
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NG + P GLRQG+PLS + F++C + ++
Sbjct: 423 MVNGTPTGFIQPQRGLRQGDPLSPYLFLICTEGMT 457
Score = 31.6 bits (70), Expect(3) = 2e-08
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 127 HILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNML 11
H+L Y+ SG ++NF KSS+ FS + + R L+ L
Sbjct: 506 HVLDLYAKGSGQQVNFDKSSLFFSTNCSQETRDRLARSL 544
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 42.7 bits (99), Expect(2) = 3e-08
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG + +PS GLRQG+P+S + F+LCAD+ S
Sbjct: 622 VNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFS 655
Score = 40.8 bits (94), Expect(2) = 3e-08
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -2
Query: 269 SHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
S +LSKA S I G ++ R +P +H FFA DS+LF KAS
Sbjct: 655 STLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKAS 695
>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
Length = 940
Score = 45.4 bits (106), Expect(2) = 3e-08
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG+L+ TPS GLRQG+P+S + F+LC + LS
Sbjct: 249 INGELTYPVTPSRGLRQGDPISPYLFLLCTEGLS 282
Score = 38.1 bits (87), Expect(2) = 3e-08
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS IL K ES IQG + + P +H FA DS+ F ++
Sbjct: 281 LSSILQKKESMGVIQGIRNGHLGPPISHLLFADDSIFFARS 321
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 45.4 bits (106), Expect(2) = 6e-08
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG+L+K PS G+RQG+P+S + F+LC + LS
Sbjct: 634 INGELTKPVVPSRGIRQGDPISPYLFLLCTEGLS 667
Score = 37.0 bits (84), Expect(2) = 6e-08
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS +L K E + +QG K R P +H FA DS+ F KA
Sbjct: 666 LSCLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKA 706
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 45.4 bits (106), Expect(2) = 6e-08
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
+NG+L+K PS G+RQG+P+S + F+LC + LS
Sbjct: 591 INGELTKPVVPSRGIRQGDPISPYLFLLCTEGLS 624
Score = 37.0 bits (84), Expect(2) = 6e-08
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKA 150
LS +L K E + +QG K R P +H FA DS+ F KA
Sbjct: 623 LSCLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKA 663
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 39.7 bits (91), Expect(3) = 2e-07
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NG F PS GLRQG+PLS F F+ D LS
Sbjct: 1227 LINGKPGPSFLPSRGLRQGDPLSPFLFLFVNDVLS 1261
Score = 33.5 bits (75), Expect(3) = 2e-07
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 145 NFANLFHILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNML 11
N L +L++Y + SG IN KSSI FS P+ LLS+++
Sbjct: 1304 NCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIM 1348
Score = 26.2 bits (56), Expect(3) = 2e-07
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 290 LFFVLILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LF +LS +++K + + + + +H FFA DSL F +A+
Sbjct: 1254 LFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRAT 1301
>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 573
Score = 40.4 bits (93), Expect(2) = 4e-07
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
I NGD P GLRQG PLS + +I+CA+ LS
Sbjct: 178 IFNGDRIGPIIPGRGLRQGCPLSPYLYIICAEGLS 212
Score = 39.3 bits (90), Expect(2) = 4e-07
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -2
Query: 272 LSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LS I+ E I G ++ R +PS +H FA D+ LFCKA+
Sbjct: 211 LSAIIKNHEFRGKIHGVRICRTTPSISHLLFADDNFLFCKAT 252
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 38.1 bits (87), Expect(3) = 5e-07
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
I+NG + P GLRQG P+S + FI CA++ S
Sbjct: 389 IINGSVKGFIKPQRGLRQGCPISPYLFITCAEAFS 423
Score = 32.7 bits (73), Expect(3) = 5e-07
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 269 SHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
S +L +AE I G + +H FA DSL+FC+AS
Sbjct: 423 SSLLQQAEQQRLIHGLSFGK-ELKISHLLFADDSLIFCRAS 462
Score = 27.3 bits (59), Expect(3) = 5e-07
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 124 ILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNM 14
IL YSL SG NF KSS+ S V + + N+
Sbjct: 472 ILDCYSLASGQIFNFEKSSLFLSGNVQQAQASAIGNI 508
>ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
gi|462395001|gb|EMJ00800.1| hypothetical protein
PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 41.2 bits (95), Expect(2) = 6e-07
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = -2
Query: 290 LFFVLILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LF +LS ++ A ++ +QG KLN P+ +H FA+D+L+F KA+
Sbjct: 279 LFISEVLSLLIKNACETDLLQGIKLNSGGPTLSHLLFANDTLIFLKAT 326
Score = 37.7 bits (86), Expect(2) = 6e-07
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NG F+PS G+RQG+P+S + F+ ++ LS
Sbjct: 252 VINGQRGGAFSPSRGIRQGDPISPYLFLFISEVLS 286
>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
gi|462406722|gb|EMJ12186.1| hypothetical protein
PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 41.2 bits (95), Expect(2) = 6e-07
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = -2
Query: 290 LFFVLILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS*L-CQSFS 126
LF +LS ++ A ++ +QG KLN P+ +H FA D+L+F KA+ CQ+ S
Sbjct: 39 LFISEVLSLLIKNACETDLLQGIKLNSGGPTLSHLLFADDTLIFLKATTQNCQNIS 94
Score = 37.7 bits (86), Expect(2) = 6e-07
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = -1
Query: 369 ILNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
++NG F+PS G+RQG+P+S + F+ ++ LS
Sbjct: 12 VINGQQGGAFSPSRGIRQGDPISPYLFLFISEVLS 46
>ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 527
Score = 40.0 bits (92), Expect(2) = 6e-07
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = -2
Query: 290 LFFVLILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LF + S ++ +A + +QG KL+ P+ +H FFA DSL F A+
Sbjct: 50 LFVSDVFSSLIRRACEARTLQGIKLSEYGPTLSHLFFADDSLFFLSAT 97
Score = 38.9 bits (89), Expect(2) = 6e-07
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1
Query: 366 LNGDLSKKFTPSHGLRQGNPLSAFFFILCADSLS 265
LNG + + F PS GLRQG+P+S + F+ +D S
Sbjct: 24 LNGKVGEYFKPSRGLRQGDPISPYLFLFVSDVFS 57
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 40.4 bits (93), Expect(2) = 1e-06
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -2
Query: 299 LSSLFFVL---ILSHILSKAESSNAIQGFKLNRISPSFAHQFFASDSLLFCKAS 147
LS FV+ +L +L AE N I G K+ R +P +H FA DS+ +CK +
Sbjct: 639 LSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVN 692
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -3
Query: 133 LFHILYSYSLTSGLEINFTKSSITFSRKVNPDKRKLLSNMLGTD 2
+ I+ YSL SG +N+ KSSI F + ++ ++R L+ LG +
Sbjct: 699 IIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIE 742