BLASTX nr result
ID: Sinomenium21_contig00049600
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00049600
(482 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007034220.1| DNA repair-recombination protein (RAD50) iso... 58 2e-06
ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, pa... 58 2e-06
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu... 58 2e-06
ref|XP_006601884.1| PREDICTED: DNA repair protein RAD50-like iso... 57 3e-06
ref|XP_004502242.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 57 3e-06
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like iso... 57 3e-06
ref|XP_003601682.1| DNA repair protein Rad50 [Medicago truncatul... 57 3e-06
gb|EXB73675.1| DNA repair protein RAD50 [Morus notabilis] 57 3e-06
ref|XP_004296957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 57 3e-06
ref|XP_006365465.1| PREDICTED: DNA repair protein RAD50-like [So... 56 5e-06
gb|AEP33775.1| Rad50 [Physcomitrella patens] gi|347954556|gb|AEP... 56 6e-06
ref|XP_002300148.1| DNA repair-recombination family protein [Pop... 56 6e-06
>ref|XP_007034220.1| DNA repair-recombination protein (RAD50) isoform 1 [Theobroma cacao]
gi|508713249|gb|EOY05146.1| DNA repair-recombination
protein (RAD50) isoform 1 [Theobroma cacao]
Length = 1316
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYRVTKD+HQHSIIE+QEIFD
Sbjct: 1290 RQHAERYYRVTKDDHQHSIIEAQEIFD 1316
>ref|XP_004166115.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 1088
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAE+YYRVTKD+HQHSIIESQEIFD
Sbjct: 1062 RQHAEKYYRVTKDDHQHSIIESQEIFD 1088
>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
Length = 1316
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAE+YYRVTKD+HQHSIIESQEIFD
Sbjct: 1290 RQHAEKYYRVTKDDHQHSIIESQEIFD 1316
>ref|XP_006601884.1| PREDICTED: DNA repair protein RAD50-like isoform X2 [Glycine max]
Length = 1339
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYRV KD+HQHSIIESQEIFD
Sbjct: 1313 RQHAERYYRVAKDDHQHSIIESQEIFD 1339
>ref|XP_004502242.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Cicer
arietinum]
Length = 1316
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYRV KD+HQHSIIESQEIFD
Sbjct: 1290 RQHAERYYRVAKDDHQHSIIESQEIFD 1316
>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like isoform X1 [Glycine max]
Length = 1316
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYRV KD+HQHSIIESQEIFD
Sbjct: 1290 RQHAERYYRVAKDDHQHSIIESQEIFD 1316
>ref|XP_003601682.1| DNA repair protein Rad50 [Medicago truncatula]
gi|355490730|gb|AES71933.1| DNA repair protein Rad50
[Medicago truncatula]
Length = 1524
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYRV KD+HQHSIIESQEIFD
Sbjct: 1498 RQHAERYYRVAKDDHQHSIIESQEIFD 1524
>gb|EXB73675.1| DNA repair protein RAD50 [Morus notabilis]
Length = 785
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAE+YYRVTKD+HQHSIIE+QEIFD
Sbjct: 759 RQHAEKYYRVTKDDHQHSIIEAQEIFD 785
>ref|XP_004296957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
[Fragaria vesca subsp. vesca]
Length = 1316
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAE+YYRVTKD+HQHSIIE+QEIFD
Sbjct: 1290 RQHAEKYYRVTKDDHQHSIIEAQEIFD 1316
>ref|XP_006365465.1| PREDICTED: DNA repair protein RAD50-like [Solanum tuberosum]
Length = 1316
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAE+YYR+TKD+HQHSIIE+QEIFD
Sbjct: 1290 RQHAEKYYRITKDDHQHSIIEAQEIFD 1316
>gb|AEP33775.1| Rad50 [Physcomitrella patens] gi|347954556|gb|AEP33778.1| Rad50
[Physcomitrella patens]
Length = 1314
Score = 55.8 bits (133), Expect = 6e-06
Identities = 23/27 (85%), Positives = 27/27 (100%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYR++KD+HQHSIIESQ+IFD
Sbjct: 1288 RQHAERYYRISKDDHQHSIIESQDIFD 1314
>ref|XP_002300148.1| DNA repair-recombination family protein [Populus trichocarpa]
gi|222847406|gb|EEE84953.1| DNA repair-recombination
family protein [Populus trichocarpa]
Length = 1316
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -1
Query: 482 RQHAERYYRVTKDEHQHSIIESQEIFD 402
RQHAERYYRV KD+HQHSIIE+QEIFD
Sbjct: 1290 RQHAERYYRVAKDDHQHSIIEAQEIFD 1316