BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00049293
         (404 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20118.3| unnamed protein product [Vitis vinifera]               65   2e-12
gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]       65   4e-12
emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]    71   1e-10
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]    58   5e-10
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]    50   1e-08
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl...    45   1e-06

>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score = 64.7 bits (156), Expect(2) = 2e-12
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = -1

Query: 248  FYWIPCPSKGYGIYYPNHSERIVKTSNARFIENVEISMSDKLYNVDIQEVMIHVPIPITS 69
            F   P  SKGY  Y PNHS RIV+T NARF+EN EIS S++   VDI+E+ + +P P   
Sbjct: 1065 FIGYPDKSKGYRFYCPNHSVRIVETGNARFLENGEISGSNEPRKVDIEEIRVDIPPPFLP 1124

Query: 68   NE 63
             E
Sbjct: 1125 QE 1126



 Score = 32.7 bits (73), Expect(2) = 2e-12
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -2

Query: 307  EAKIYNL*EKKLDFRMINNCFIGY 236
            EA+IYN  EKKLD R ++  FIGY
Sbjct: 1045 EARIYNPHEKKLDSRTVSGYFIGY 1068


>gb|ABW74556.1| copia-like pol polyprotein [Boechera divaricarpa]
          Length = 931

 Score = 65.1 bits (157), Expect(2) = 4e-12
 Identities = 35/58 (60%), Positives = 38/58 (65%)
 Frame = -1

Query: 248 FYWIPCPSKGYGIYYPNHSERIVKTSNARFIENVEISMSDKLYNVDIQEVMIHVPIPI 75
           F   P  SKGY  Y PNHS RIV+T NARFIEN+E S S K   VDIQEV I V  P+
Sbjct: 389 FIGYPEKSKGYTFYCPNHSMRIVETGNARFIENIETSGSGKPRKVDIQEVQIKVLPPV 446



 Score = 31.6 bits (70), Expect(2) = 4e-12
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 307 EAKIYNL*EKKLDFRMINNCFIGY 236
           E K+YN  EKKLD R ++  FIGY
Sbjct: 369 EVKLYNPHEKKLDSRTVSGFFIGY 392


>emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
          Length = 764

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/74 (52%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -1

Query: 281 KEIGF*NDQ*LFYWIPCPSKGYGIYYPNHSERIVKTSNARFIENVEISMSDKLY-NVDIQ 105
           K++ F      F   P  SKGY  YYPNHS +IV+T N RFIEN EI  SD+L    +IQ
Sbjct: 580 KKLDFKTISGYFIDYPMKSKGYRFYYPNHSTKIVETGNXRFIENGEIRGSDQLQKKTNIQ 639

Query: 104 EVMIHVPIPITSNE 63
           EV + VP+PITS E
Sbjct: 640 EVRVQVPLPITSXE 653


>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
          Length = 2026

 Score = 57.8 bits (138), Expect(2) = 5e-10
 Identities = 29/62 (46%), Positives = 37/62 (59%)
 Frame = -1

Query: 248 FYWIPCPSKGYGIYYPNHSERIVKTSNARFIENVEISMSDKLYNVDIQEVMIHVPIPITS 69
           F   P  SKGY  Y PNH  RIV+T NARF+EN EIS S++    DI+E+ + +  P   
Sbjct: 458 FIGYPDKSKGYXFYCPNHXVRIVETXNARFLENGEISGSNEPRKXDIEEIRVDIXPPFLP 517

Query: 68  NE 63
            E
Sbjct: 518 QE 519



 Score = 31.6 bits (70), Expect(2) = 5e-10
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 307 EAKIYNL*EKKLDFRMINNCFIGY 236
           E +IYN  EKKLD R I+  FIGY
Sbjct: 438 ETRIYNPHEKKLDSRTISGYFIGY 461


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score = 50.4 bits (119), Expect(2) = 1e-08
 Identities = 24/46 (52%), Positives = 34/46 (73%)
 Frame = -1

Query: 221 GYGIYYPNHSERIVKTSNARFIENVEISMSDKLYNVDIQEVMIHVP 84
           GY I YP+ S+ IV+T NARF+EN EIS S++   VDI+E+ + +P
Sbjct: 650 GYFIGYPDKSKGIVETGNARFLENGEISGSNEPRKVDIEEIRVDIP 695



 Score = 34.3 bits (77), Expect(2) = 1e-08
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = -2

Query: 313 TLEAKIYNL*EKKLDFRMINNCFIGY 236
           T EA+IYN  EKKLD R ++  FIGY
Sbjct: 630 TAEARIYNPHEKKLDSRTVSGYFIGY 655


>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
          Length = 1321

 Score = 45.4 bits (106), Expect(2) = 1e-06
 Identities = 27/55 (49%), Positives = 35/55 (63%)
 Frame = -1

Query: 227 SKGYGIYYPNHSERIVKTSNARFIENVEISMSDKLYNVDIQEVMIHVPIPITSNE 63
           SKGY  Y P+H  RIV++ NA+FIEN  IS SD+L ++   E+      P TSNE
Sbjct: 657 SKGYRFYCPHHITRIVESRNAKFIENDLISGSDQLRDLG-SEIDYIESQPSTSNE 710



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 307 EAKIYNL*EKKLDFRMINNCFIGYLAHPKAMEY 209
           E +IYN  EKKLD R I+  FIGY    K   +
Sbjct: 630 EVRIYNPQEKKLDPRTISGYFIGYAERSKGYRF 662