BLASTX nr result
ID: Sinomenium21_contig00048990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00048990
(541 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat... 172 9e-45
emb|CBI36364.3| unnamed protein product [Vitis vinifera] 166 2e-41
ref|XP_006828456.1| hypothetical protein AMTR_s00060p00130100 [A... 127 9e-32
ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein... 104 5e-26
gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis] 101 7e-25
gb|EMT24749.1| hypothetical protein F775_11830 [Aegilops tauschii] 112 7e-25
ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prun... 102 4e-24
gb|EXB56658.1| Pentatricopeptide repeat-containing protein [Moru... 115 7e-24
ref|XP_003560564.1| PREDICTED: pentatricopeptide repeat-containi... 106 7e-24
ref|NP_001058115.1| Os06g0625800 [Oryza sativa Japonica Group] g... 108 1e-23
gb|EEE66046.1| hypothetical protein OsJ_22034 [Oryza sativa Japo... 108 1e-23
gb|EEC81008.1| hypothetical protein OsI_23770 [Oryza sativa Indi... 108 1e-23
gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii] 108 1e-23
ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-23
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-23
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi... 110 3e-23
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare] 107 4e-23
ref|XP_004965826.1| PREDICTED: pentatricopeptide repeat-containi... 107 5e-23
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar... 107 6e-23
ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat... 102 8e-23
>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 172 bits (436), Expect(2) = 9e-45
Identities = 79/135 (58%), Positives = 106/135 (78%)
Frame = +1
Query: 1 VHPSAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
V+P YS L+Q+C++S SF+ GKS+H QM+++G+NPD +L TKI+MLYARSG L DL A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
RKLF+EMPERN T+WNTMILAYARVDD++E + L+ M+ SG DKFTFPS+++AC A+
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188
Query: 361 EDFDGICQVHGLIFK 405
ED G+ Q+ + K
Sbjct: 189 EDMGGVRQLQSSVVK 203
Score = 33.9 bits (76), Expect(2) = 9e-45
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 432 GSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
G +LVDGYAR G +D AV + +I+ +V+T VI
Sbjct: 213 GGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVI 248
Score = 76.3 bits (186), Expect(2) = 2e-15
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Frame = +1
Query: 1 VHPSAYSFL--LQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P ++F L+ C S + GK +H++++A GF DTF+ +I +YA+ D
Sbjct: 272 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 331
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
K+FDEM ERN +WN++I A A+ +A+ LF MQ+SG ++F SI+ A
Sbjct: 332 ---KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASA 388
Query: 355 ALEDFDGICQVHG 393
L D ++HG
Sbjct: 389 GLADIGKGRELHG 401
Score = 32.0 bits (71), Expect(2) = 2e-15
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 402 QNLFEL*FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
+NL GS+LVD Y++CG ++ A F + E+N ++
Sbjct: 405 RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVS 445
Score = 80.1 bits (196), Expect(2) = 2e-15
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
+ P ++F LL C N + G+ +HA ++ + ++T+++ +Y+ G L
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN--- 531
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
A+++F+ M ERN+ SWN+MI Y + + EA+ LF MQ +GI PD F+ S++ +C
Sbjct: 532 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 591
Query: 355 ALEDFDGICQVHGLIFK 405
+L D ++H I +
Sbjct: 592 SLSDSQKGRELHNFIVR 608
Score = 27.7 bits (60), Expect(2) = 2e-15
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 441 LVDGYARCGSIDRAVAAFADIDEKNVI 521
LVD YA+CGS+D A + +K+VI
Sbjct: 621 LVDMYAKCGSMDYAWKVYDQTIKKDVI 647
Score = 62.0 bits (149), Expect(2) = 2e-10
Identities = 37/122 (30%), Positives = 60/122 (49%)
Frame = +1
Query: 25 LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFDEMP 204
+++ C+ + + + +V G N + F+ ++ YAR G + D + DE+
Sbjct: 181 VIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTS---LDEIE 237
Query: 205 ERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDGICQ 384
+ +WN +I Y ++ EA +F M K G+ PD FTF S +R C AL DG Q
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 297
Query: 385 VH 390
VH
Sbjct: 298 VH 299
Score = 29.3 bits (64), Expect(2) = 2e-10
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 432 GSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
G++L+D YA+C + + F ++ E+N +T ++I
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 349
Score = 57.4 bits (137), Expect(2) = 1e-09
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 30/165 (18%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDL---- 162
+ P +S +L CV+ + G+ +H +V + + LQ ++ +YA+ G +
Sbjct: 576 IKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAW 635
Query: 163 -----------------ADLYV-------ARKLFDEMPERNSTSWNTMILAYARVDDHIE 270
+V A+ LFD+M +RN+ WN+++ YA E
Sbjct: 636 KVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKE 695
Query: 271 AVELFYLMQKSGILPDKFTFPSIVRACTALEDFDGICQVHGLIFK 405
+ F M +S I D T +IV C++L + Q+H LI K
Sbjct: 696 SFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIK 740
Score = 30.8 bits (68), Expect(2) = 1e-09
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
++LVD Y++CG+I +A F +++ KN+++
Sbjct: 752 TALVDMYSKCGAITKARTVFDNMNGKNIVS 781
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +1
Query: 37 CVNSGSFELGKSMHAQMVADGF-NPDTFLQTKIIMLYARSGDLADLYVARKLFDEMPERN 213
C + + E G +H+ ++ GF N L+T ++ +Y++ G + AR +FD M +N
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITK---ARTVFDNMNGKN 778
Query: 214 STSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
SWN MI Y++ EA+ L+ M K G+ P++ TF +I+ AC+
Sbjct: 779 IVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACS 825
Score = 60.8 bits (146), Expect(2) = 1e-07
Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +1
Query: 64 GKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFDEMPERNSTSWNTMILA 243
G+ +H +V + N D L + ++ +Y++ G + + A ++F + ERN S+N ++
Sbjct: 396 GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEE---AHQVFRSLLERNEVSYNALLAG 452
Query: 244 YARVDDHIEAVELFYLMQ-KSGILPDKFTFPSIVRACTALEDFDGICQVHGLIFK 405
Y + EA+EL++ MQ + GI PD+FTF +++ C + + Q+H + +
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR 507
Score = 20.8 bits (42), Expect(2) = 1e-07
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKN 515
+ LV Y+ CG ++ A F + E+N
Sbjct: 518 TELVHMYSECGRLNYAKEIFNRMAERN 544
>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 166 bits (419), Expect(2) = 2e-41
Identities = 80/130 (61%), Positives = 100/130 (76%)
Frame = +1
Query: 1 VHPSAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
V+P YS L+Q+C++S SF+ GKS+H QM+++G+NPD +L TKI+MLYARSG L DL A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
RKLF+EMPERN T+WNTMILAYARVDD++EA +F M K G+ PD FTF S +R C AL
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188
Query: 361 EDFDGICQVH 390
DG QVH
Sbjct: 189 RSRDGGKQVH 198
Score = 29.3 bits (64), Expect(2) = 2e-41
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 432 GSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
G++L+D YA+C + + F ++ E+N +T ++I
Sbjct: 213 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248
Score = 80.1 bits (196), Expect(2) = 2e-14
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
+ P ++F LL C N + G+ +HA ++ + ++T+++ +Y+ G L
Sbjct: 274 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN--- 330
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
A+++F+ M ERN+ SWN+MI Y + + EA+ LF MQ +GI PD F+ S++ +C
Sbjct: 331 YAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCV 390
Query: 355 ALEDFDGICQVHGLIFK 405
+L D ++H I +
Sbjct: 391 SLSDSQKGRELHNFIVR 407
Score = 24.6 bits (52), Expect(2) = 2e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 441 LVDGYARCGSIDRA 482
LVD YA+CGS+D A
Sbjct: 420 LVDMYAKCGSMDYA 433
Score = 77.4 bits (189), Expect(2) = 1e-12
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Frame = +1
Query: 1 VHPSAYSFL--LQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P ++F L+ C S + GK +H++++A GF DTF+ +I +YA+ D
Sbjct: 171 VCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 230
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKS--GILPDKFTFPSIVRA 348
K+FDEM ERN +WN++I A A+ +A+ LF MQ+S GI PD+FTF +++
Sbjct: 231 ---KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTL 287
Query: 349 CTALEDFDGICQVHGLIFK 405
C + + Q+H + +
Sbjct: 288 CANQRNDNQGRQIHAHLIR 306
Score = 20.8 bits (42), Expect(2) = 1e-12
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKN 515
+ LV Y+ CG ++ A F + E+N
Sbjct: 317 TELVHMYSECGRLNYAKEIFNRMAERN 343
>ref|XP_006828456.1| hypothetical protein AMTR_s00060p00130100 [Amborella trichopoda]
gi|548833204|gb|ERM95872.1| hypothetical protein
AMTR_s00060p00130100 [Amborella trichopoda]
Length = 745
Score = 127 bits (318), Expect(2) = 9e-32
Identities = 62/136 (45%), Positives = 90/136 (66%)
Frame = +1
Query: 1 VHPSAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
V+ S Y+ L+Q C++S E G+ + A M+++ F PDTFLQTK+IML AR G++A A
Sbjct: 91 VYSSTYACLIQYCIDSNCIEKGQIVQAHMISNDFEPDTFLQTKLIMLQARCGNVA---FA 147
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
R+LFD M + NST+WNTM++ Y++ E +ELF M ++G LPD+F FP+ ++ + L
Sbjct: 148 RRLFDNMTKPNSTAWNTMLIGYSKAGHDNEVLELFSKMHRAGCLPDRFGFPATIKGFSGL 207
Query: 361 EDFDGICQVHGLIFKT 408
ED GI H L KT
Sbjct: 208 EDETGIKLAHALTIKT 223
Score = 35.8 bits (81), Expect(2) = 9e-32
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 423 FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
F+ GS LVDGYA+ G + A AF +I EK++++
Sbjct: 229 FAVGSGLVDGYAKVGLMGDASLAFEEIGEKSLVS 262
Score = 77.8 bits (190), Expect(2) = 3e-17
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Frame = +1
Query: 25 LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDL-ADLYVARKLFDEM 201
+++ C S G+ +H +++ GF D F+ +I +YA+ G L A L+V FD M
Sbjct: 301 MIKACGALKSVLRGEQVHGRVLVSGFGRDVFVSNSLIDMYAKLGSLEACLHV----FDSM 356
Query: 202 PERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
PERN SWNT+I A+A++ +A LF MQ+SG D+F SI+ AC L
Sbjct: 357 PERNQVSWNTLISAHAQLGWFEQAFYLFARMQQSGFESDRFNMGSILMACAGL 409
Score = 36.2 bits (82), Expect(2) = 3e-17
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 402 QNLFEL*FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
+ L EL GS+LVD Y++CGS++ A F + ++NV++ +I
Sbjct: 424 RGLLELDVVLGSALVDMYSKCGSLEEARRVFDRMGQRNVVSWNAII 469
Score = 77.0 bits (188), Expect(2) = 2e-13
Identities = 38/127 (29%), Positives = 73/127 (57%)
Frame = +1
Query: 25 LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFDEMP 204
+L C + + G+ +H+ ++ D L + ++ +Y++ G L + AR++FD M
Sbjct: 402 ILMACAGLAAKKPGREIHSYLIRGLLELDVVLGSALVDMYSKCGSLEE---ARRVFDRMG 458
Query: 205 ERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDGICQ 384
+RN SWN +I+ + +V EA+ L++ M+++G +PD+FTF S++ T D + Q
Sbjct: 459 QRNVVSWNAIIVGFVQVGQGEEALNLYHQMKQTGTVPDEFTFASLL---TLYTDEGNLNQ 515
Query: 385 VHGLIFK 405
VHG + +
Sbjct: 516 VHGFLVR 522
Score = 23.9 bits (50), Expect(2) = 2e-13
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 438 SLVDGYARCGSIDRAVAAFADIDEKNV 518
+LVD Y+ CG ID A + + K+V
Sbjct: 534 TLVDMYSTCGRIDDACRFYHSVVGKDV 560
Score = 58.9 bits (141), Expect(2) = 2e-09
Identities = 37/111 (33%), Positives = 58/111 (52%)
Frame = +1
Query: 67 KSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFDEMPERNSTSWNTMILAY 246
K HA + + + + + ++ YA+ G + D +A F+E+ E++ SWN +I Y
Sbjct: 214 KLAHALTIKTSLSENFAVGSGLVDGYAKVGLMGDASLA---FEEIGEKSLVSWNALIGGY 270
Query: 247 ARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDGICQVHGLI 399
R EA E F MQ G+ PD FT S+++AC AL+ QVHG +
Sbjct: 271 VRAGRPDEAWEAFSEMQALGMDPDHFTLASMIKACGALKSVLRGEQVHGRV 321
Score = 28.5 bits (62), Expect(2) = 2e-09
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
+SL+D YA+ GS++ + F + E+N ++ T+I
Sbjct: 334 NSLIDMYAKLGSLEACLHVFDSMPERNQVSWNTLI 368
Score = 61.2 bits (147), Expect = 2e-07
Identities = 32/99 (32%), Positives = 49/99 (49%)
Frame = +1
Query: 109 DTFLQTKIIMLYARSGDLADLYVARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFY 288
D +L +I Y + + AR++FDEM ERNS SWN M+ Y + +EA+ LF
Sbjct: 559 DVYLHNVMIASYVNCNRIEE---ARQIFDEMGERNSVSWNAMLSGYTSIQSEVEALRLFS 615
Query: 289 LMQKSGILPDKFTFPSIVRACTALEDFDGICQVHGLIFK 405
M + G+ D T ++ AC L + +H + K
Sbjct: 616 RMMEGGVEYDSSTLVTLFDACAGLAALEQGKLLHACMIK 654
>ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780995|gb|EOY28251.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 905
Score = 104 bits (260), Expect(2) = 5e-26
Identities = 55/137 (40%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
+ PS Y+F +++ C + +F +GK++H Q+++ G+ D+++Q ++ YA+SGDL
Sbjct: 427 ISPSNYTFSAVVKCCTDLMAFNIGKTVHCQVLSCGYGLDSYVQAALVSFYAKSGDLG--- 483
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
VARK+FD+MPE+ +WN+MI Y + EAV LFYLMQ SG+ PD TF ++ AC
Sbjct: 484 VARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVGLFYLMQDSGVKPDSTTFVCLLSACA 543
Query: 355 ALEDFDGICQVHGLIFK 405
L C VH I +
Sbjct: 544 QLGAAGLGCWVHEYIVR 560
Score = 38.9 bits (89), Expect(2) = 5e-26
Identities = 16/46 (34%), Positives = 31/46 (67%)
Frame = +3
Query: 402 QNLFEL*FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
+N F++ G++L++ Y+RCG++ +A AF ++EKNV+ +I
Sbjct: 560 RNCFDVNVVLGTALINMYSRCGNVSKAREAFDSMEEKNVVAWTAMI 605
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P + +F LL C G+ LG +H +V + F+ + L T +I +Y+R G+++
Sbjct: 528 VKPDSTTFVCLLSACAQLGAAGLGCWVHEYIVRNCFDVNVVLGTALINMYSRCGNVSK-- 585
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRAC 351
AR+ FD M E+N +W MI Y +A+ELF M+ G P+ TF +I+ AC
Sbjct: 586 -AREAFDSMEEKNVVAWTAMISGYGMHGHGSQAIELFSEMRVHGPRPNNVTFVAILSAC 643
>gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis]
Length = 586
Score = 101 bits (252), Expect(2) = 7e-25
Identities = 54/135 (40%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V PS+Y+F +++ C + S LGK +H+ + G D F++ ++ YA+SGDL
Sbjct: 108 VSPSSYTFTSVIKACADLSSLRLGKCVHSHALVSGHGSDRFVEAALVNFYAKSGDLG--- 164
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
VARK+FDEM ER +WN+MI AY + EA+E+F M++ G+ PD TF S++ AC+
Sbjct: 165 VARKVFDEMSERTVVAWNSMISAYEQNGCAREAIEVFCRMRERGVRPDSTTFVSVLSACS 224
Query: 355 ALEDFDGICQVHGLI 399
L C VH I
Sbjct: 225 QLGALGLGCWVHDYI 239
Score = 38.1 bits (87), Expect(2) = 7e-25
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 432 GSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
G+SL++ YARCG++ +A F + E+NV+T VI
Sbjct: 251 GTSLINMYARCGNVSKAREVFDSMSERNVVTWTAVI 286
Score = 72.0 bits (175), Expect = 9e-11
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +1
Query: 1 VHPSAYSFL--LQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P + +F+ L C G+ LG +H +V +G + L T +I +YAR G+++
Sbjct: 209 VRPDSTTFVSVLSACSQLGALGLGCWVHDYIVGNGLDLTVVLGTSLINMYARCGNVSK-- 266
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRAC 351
AR++FD M ERN +W +I AY +A+ELF+ M+ G P+ TF +++ AC
Sbjct: 267 -AREVFDSMSERNVVTWTAVISAYGMHGYGSQAMELFHRMKAHGSCPNNVTFVAVLSAC 324
>gb|EMT24749.1| hypothetical protein F775_11830 [Aegilops tauschii]
Length = 394
Score = 112 bits (280), Expect(2) = 7e-25
Identities = 57/133 (42%), Positives = 84/133 (63%)
Frame = +1
Query: 10 SAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKL 189
SAY+ LLQECVN LGK + A+MV+ GF ++ TK+++ YA+ G+L VAR L
Sbjct: 27 SAYALLLQECVNRRDARLGKRIAARMVSTGFRCSDYMATKLLIFYAKIGELG---VARDL 83
Query: 190 FDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDF 369
FD MP R+ +WN M+ R + +AVE+F LM+ G+ PD+FTF S++ AC +
Sbjct: 84 FDGMPRRDVVAWNAMVSGCTRGREEAQAVEMFGLMRAEGLRPDQFTFASVLCACARMAAL 143
Query: 370 DGICQVHGLIFKT 408
D +VHG++ K+
Sbjct: 144 DHGRRVHGVMVKS 156
Score = 27.3 bits (59), Expect(2) = 7e-25
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNV 518
S+L D Y +C S + A AFA E+NV
Sbjct: 167 SALADMYLKCSSAEDARRAFAAAPERNV 194
>ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
gi|462409071|gb|EMJ14405.1| hypothetical protein
PRUPE_ppb012387mg [Prunus persica]
Length = 588
Score = 102 bits (255), Expect(2) = 4e-24
Identities = 51/132 (38%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
+ PS+YSF +++ C + + LG+ +H+ ++ G+ D+F+Q ++ LY++SGDL
Sbjct: 110 IAPSSYSFTSVIKSCADISALRLGRCVHSHVLVCGYGSDSFVQAALVTLYSKSGDLD--- 166
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
ARKLFD+MPER+ +WN+MI Y + EA+E+F M++ G+ PD TF S++ AC+
Sbjct: 167 AARKLFDKMPERSVVAWNSMISGYEQNGFSREAIEVFNQMRELGVEPDSTTFVSVLAACS 226
Query: 355 ALEDFDGICQVH 390
L C VH
Sbjct: 227 QLGALGLGCSVH 238
Score = 34.3 bits (77), Expect(2) = 4e-24
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 432 GSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
G+SL+ YARCG++ +A F ++E+NVI +I
Sbjct: 253 GTSLIIMYARCGNVSKAREVFDSMNERNVIAWTAMI 288
Score = 78.6 bits (192), Expect = 9e-13
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Frame = +1
Query: 1 VHPSAYSFL--LQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P + +F+ L C G+ LG S+H ++ +G + + L T +I++YAR G+++
Sbjct: 211 VEPDSTTFVSVLAACSQLGALGLGCSVHHDVINNGLHVNVALGTSLIIMYARCGNVSK-- 268
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
AR++FD M ERN +W MI YA I+AVELF M+ G +P+ TF +++ AC
Sbjct: 269 -AREVFDSMNERNVIAWTAMISGYATNGYGIQAVELFCQMRAHGPVPNTVTFVAVLAACA 327
Query: 355 -------ALEDFDGICQVHGLI 399
E + + Q +GL+
Sbjct: 328 HAGLVHEGRETYANMRQEYGLV 349
>gb|EXB56658.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 652
Score = 115 bits (288), Expect = 7e-24
Identities = 54/135 (40%), Positives = 89/135 (65%)
Frame = +1
Query: 1 VHPSAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
V+P Y+ LLQEC+ ++ G+ +H+QM+ GF P+ +L+TK+++LYA+SGDL ++
Sbjct: 132 VNPRTYALLLQECIFMKEYKPGRRIHSQMIVLGFVPNEYLKTKLLILYAKSGDLGTAHI- 190
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
L D++ E+NS SWN MI AY + + L+Y M++SG++PD++TF S+ RA +L
Sbjct: 191 --LLDKLVEKNSVSWNAMIAAYVQKGQAEVGLNLYYKMRQSGLIPDQYTFASVFRAYASL 248
Query: 361 EDFDGICQVHGLIFK 405
+ Q HG++ K
Sbjct: 249 ATLELGKQAHGVMIK 263
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +1
Query: 7 PSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
P Y+F + + + + ELGK H M+ + + ++ +Y + L+D A
Sbjct: 233 PDQYTFASVFRAYASLATLELGKQAHGVMIKCDIKVNIVVNGALLDMYFKGSSLSD---A 289
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRAC 351
+ +FD P+RN +W +I Y +E ++LF+ M+ G P+ TF S++ AC
Sbjct: 290 QLVFDTSPDRNVITWTALISGYGLHGRFVEVLDLFHKMKAEGFRPNYVTFLSVLSAC 346
>ref|XP_003560564.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Brachypodium distachyon]
Length = 435
Score = 106 bits (265), Expect(2) = 7e-24
Identities = 53/131 (40%), Positives = 81/131 (61%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y+ LLQECVN +GK +HA+M++ GFN + ++ TK+++ YA+ G+L VAR LFD
Sbjct: 38 YALLLQECVNRRDARVGKRIHARMISTGFNCNDYMATKLLIFYAKIGELG---VARNLFD 94
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
MP R +WN +I R +A+E+F M+ G+ PD+FTF S++ AC L
Sbjct: 95 GMPRRGVVAWNALISGCTRGGLESQALEMFGSMRAEGLRPDQFTFSSVLCACARLAALQH 154
Query: 376 ICQVHGLIFKT 408
+VHG++ K+
Sbjct: 155 GWRVHGVMVKS 165
Score = 29.6 bits (65), Expect(2) = 7e-24
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
S+LVD Y +C S + A AFA E+NV VI
Sbjct: 176 SALVDMYLKCSSTEDARRAFAAAPERNVTMWTAVI 210
>ref|NP_001058115.1| Os06g0625800 [Oryza sativa Japonica Group]
gi|51535726|dbj|BAD37743.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113596155|dbj|BAF20029.1| Os06g0625800 [Oryza
sativa Japonica Group]
Length = 433
Score = 108 bits (270), Expect(2) = 1e-23
Identities = 55/131 (41%), Positives = 82/131 (62%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y+ LLQECVN +GK +HA+MV+ GF ++ TK+++ Y + G+L VARK+FD
Sbjct: 38 YALLLQECVNRRDARMGKRIHARMVSVGFGGGVYIVTKLLIFYVKIGELG---VARKVFD 94
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
MP+R+ +WN MI AR AVE+F M+ G+ PD+FTF S++ AC L +
Sbjct: 95 GMPQRSVVAWNAMISGCARGGAEARAVEMFGSMRAEGMRPDQFTFASVLCACARLAALEH 154
Query: 376 ICQVHGLIFKT 408
+VHG++ K+
Sbjct: 155 GRRVHGVMVKS 165
Score = 27.3 bits (59), Expect(2) = 1e-23
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
S+LVD Y +C S + A AFA +NV VI
Sbjct: 176 SALVDMYLKCSSPEEARRAFAAAPARNVTMWTAVI 210
>gb|EEE66046.1| hypothetical protein OsJ_22034 [Oryza sativa Japonica Group]
Length = 425
Score = 108 bits (270), Expect(2) = 1e-23
Identities = 55/131 (41%), Positives = 82/131 (62%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y+ LLQECVN +GK +HA+MV+ GF ++ TK+++ Y + G+L VARK+FD
Sbjct: 30 YALLLQECVNRRDARMGKRIHARMVSVGFGGGVYIVTKLLIFYVKIGELG---VARKVFD 86
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
MP+R+ +WN MI AR AVE+F M+ G+ PD+FTF S++ AC L +
Sbjct: 87 GMPQRSVVAWNAMISGCARGGAEARAVEMFGSMRAEGMRPDQFTFASVLCACARLAALEH 146
Query: 376 ICQVHGLIFKT 408
+VHG++ K+
Sbjct: 147 GRRVHGVMVKS 157
Score = 27.3 bits (59), Expect(2) = 1e-23
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
S+LVD Y +C S + A AFA +NV VI
Sbjct: 168 SALVDMYLKCSSPEEARRAFAAAPARNVTMWTAVI 202
>gb|EEC81008.1| hypothetical protein OsI_23770 [Oryza sativa Indica Group]
Length = 275
Score = 108 bits (270), Expect(2) = 1e-23
Identities = 55/131 (41%), Positives = 82/131 (62%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y+ LLQECVN +GK +HA+MV+ GF ++ TK+++ Y + G+L VARK+FD
Sbjct: 30 YALLLQECVNRRDARMGKRIHARMVSVGFGGGVYIVTKLLIFYVKIGELG---VARKVFD 86
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
MP+R+ +WN MI AR AVE+F M+ G+ PD+FTF S++ AC L +
Sbjct: 87 GMPQRSVVAWNAMISGCARGGAEARAVEMFGSMRAEGMRPDQFTFASVLCACARLAALEH 146
Query: 376 ICQVHGLIFKT 408
+VHG++ K+
Sbjct: 147 GRRVHGVMVKS 157
Score = 27.3 bits (59), Expect(2) = 1e-23
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
S+LVD Y +C S + A AFA +NV VI
Sbjct: 174 SALVDMYLKCSSPEEARRAFAAAPARNVTMWTAVI 208
>gb|EMT01370.1| hypothetical protein F775_14713 [Aegilops tauschii]
Length = 637
Score = 108 bits (270), Expect(2) = 1e-23
Identities = 53/125 (42%), Positives = 77/125 (61%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y+ +LQ CV +GS G+ +H +++ G PDT L TK++ LYA G + AR+LFD
Sbjct: 65 YASILQSCVAAGSLRAGRKLHGRLLVSGLGPDTVLSTKLVDLYAACGHVGQ---ARRLFD 121
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
MP+RN WN +I AYAR AV+L+ M + G+ PD FT+P +++AC AL D +
Sbjct: 122 GMPKRNVFLWNVLIRAYAREGPREAAVQLYRGMAEHGVEPDNFTYPLVLKACAALLDLET 181
Query: 376 ICQVH 390
+VH
Sbjct: 182 GREVH 186
Score = 26.9 bits (58), Expect(2) = 1e-23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 423 FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVI 521
F C + +VD YA+CG +D A A F I ++ +
Sbjct: 199 FVC-AGVVDMYAKCGCVDDARAVFDGIAVRDAV 230
Score = 60.5 bits (145), Expect = 3e-07
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 28 LQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFDEMPE 207
+ ++ + G+ +H GF L+T ++ +YA+SG L +VAR LF+++ +
Sbjct: 271 ISAAADAAALPRGRELHGFGWRRGFGGQDKLKTSLVDMYAKSGWL---HVARVLFEQLMK 327
Query: 208 RNSTSWNTMILAYARVDDHIEAVELFYLMQ-KSGILPDKFTFPSIVRAC 351
R SWN MI Y EA+ELF M+ + + PD TF ++ AC
Sbjct: 328 RELVSWNAMICGYGMHGHADEALELFNKMRGDAQVTPDNITFVGVLSAC 376
Score = 54.7 bits (130), Expect(2) = 9e-06
Identities = 34/126 (26%), Positives = 59/126 (46%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y +L+ C E G+ +H + + D F+ ++ +YA+ G + D AR +FD
Sbjct: 166 YPLVLKACAALLDLETGREVHEHVSGTRWGQDVFVCAGVVDMYAKCGCVDD---ARAVFD 222
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
+ R++ WN+MI AY + +EA+ L M +G+ P T S + A
Sbjct: 223 GIAVRDAVVWNSMIAAYGQNGRPMEALSLCRDMASNGVGPTIATLVSTISAAADAAALPR 282
Query: 376 ICQVHG 393
++HG
Sbjct: 283 GRELHG 288
Score = 20.4 bits (41), Expect(2) = 9e-06
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
+SLVD YA+ G + A F + ++ +++
Sbjct: 303 TSLVDMYAKSGWLHVARVLFEQLMKRELVS 332
>ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Cucumis sativus]
gi|449526397|ref|XP_004170200.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g16470-like [Cucumis sativus]
Length = 486
Score = 107 bits (267), Expect(2) = 2e-23
Identities = 51/134 (38%), Positives = 83/134 (61%)
Frame = +1
Query: 4 HPSAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVAR 183
H Y LLQEC+ + GK +HAQMV G+ P+ +L TK+++LYA+SGDL YV
Sbjct: 87 HSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGYVPNEYLNTKLLILYAKSGDLETAYV-- 144
Query: 184 KLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALE 363
L + + E++ SWN++I Y + +E + M++SG++PD++TF S++RAC +L
Sbjct: 145 -LHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLKMRQSGLMPDQYTFASVLRACASLA 203
Query: 364 DFDGICQVHGLIFK 405
+ + HG++ K
Sbjct: 204 SLEHGKRAHGVLIK 217
Score = 27.3 bits (59), Expect(2) = 2e-23
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
S+LVD Y +C S+ AF +NVIT +I
Sbjct: 228 SALVDMYFKCSSLSDGHKAFNKSSNRNVITWTALI 262
>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 110 bits (276), Expect(2) = 3e-23
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
Frame = +1
Query: 10 SAYSFLLQECVNSGSFELGKSMHAQM-VADGFNPDTFLQTKIIMLYARSGDLADLYVARK 186
+ Y LLQ C++ GS ELG+ +H +M + NP F++TK++ +YA+ G L D ARK
Sbjct: 81 NTYINLLQTCIDVGSIELGRELHVRMGLVHRVNP--FVETKLVSMYAKCGCLKD---ARK 135
Query: 187 LFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALED 366
+FD M ERN +W+ MI AY+R E VELF+LM G+LPD F FP I++AC ED
Sbjct: 136 VFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCED 195
Query: 367 FDGICQVHGLIFK 405
+ + +H L+ +
Sbjct: 196 LETVKLIHSLVIR 208
Score = 23.1 bits (48), Expect(2) = 3e-23
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
+S++ + +CG + A F ++DE++ ++
Sbjct: 219 NSILTAFVKCGKLSLARKFFGNMDERDGVS 248
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P A+ F +LQ C N E K +H+ ++ G + L I+ + + G L+
Sbjct: 176 VLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLS--- 232
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
+ARK F M ER+ SWN MI Y + + EA L M G P T+ ++ + +
Sbjct: 233 LARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYS 292
Query: 355 ALEDFD 372
L D D
Sbjct: 293 QLGDCD 298
>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 110 bits (276), Expect(2) = 3e-23
Identities = 58/133 (43%), Positives = 84/133 (63%), Gaps = 1/133 (0%)
Frame = +1
Query: 10 SAYSFLLQECVNSGSFELGKSMHAQM-VADGFNPDTFLQTKIIMLYARSGDLADLYVARK 186
+ Y LLQ C++ GS ELG+ +H +M + NP F++TK++ +YA+ G L D ARK
Sbjct: 81 NTYINLLQTCIDVGSIELGRELHVRMGLVHRVNP--FVETKLVSMYAKCGCLKD---ARK 135
Query: 187 LFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALED 366
+FD M ERN +W+ MI AY+R E VELF+LM G+LPD F FP I++AC ED
Sbjct: 136 VFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCED 195
Query: 367 FDGICQVHGLIFK 405
+ + +H L+ +
Sbjct: 196 LETVKLIHSLVIR 208
Score = 23.1 bits (48), Expect(2) = 3e-23
Identities = 7/30 (23%), Positives = 19/30 (63%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
+S++ + +CG + A F ++DE++ ++
Sbjct: 219 NSILTAFVKCGKLSLARKFFGNMDERDGVS 248
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +1
Query: 1 VHPSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLY 174
V P A+ F +LQ C N E K +H+ ++ G + L I+ + + G L+
Sbjct: 176 VLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLS--- 232
Query: 175 VARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACT 354
+ARK F M ER+ SWN MI Y + + EA L M G P T+ ++ + +
Sbjct: 233 LARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYS 292
Query: 355 ALEDFD 372
L D D
Sbjct: 293 QLGDCD 298
>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 107 bits (266), Expect(2) = 4e-23
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +1
Query: 7 PSAY---SFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYV 177
P AY + +LQ CV SGS G+ +H +++ G PDT L TK++ LYA G +
Sbjct: 59 PHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGH--- 115
Query: 178 ARKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTA 357
AR+LFD MP+RN WN +I AYAR AV L+ M + G+ PD FT+P +++AC A
Sbjct: 116 ARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAA 175
Query: 358 LEDFDGICQVH 390
L D + +VH
Sbjct: 176 LLDLETGREVH 186
Score = 26.9 bits (58), Expect(2) = 4e-23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 423 FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVI 521
F C + +VD YA+CG +D A A F I ++ +
Sbjct: 199 FVC-AGVVDMYAKCGCVDDARAVFDGIAVRDAV 230
Score = 55.1 bits (131), Expect(2) = 4e-06
Identities = 35/117 (29%), Positives = 60/117 (51%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y +L+ C E G+ +H ++ + D F+ ++ +YA+ G + D AR +FD
Sbjct: 166 YPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDD---ARAVFD 222
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALED 366
+ R++ WN+MI AY + +EA+ L M +GI P T ++V A +A D
Sbjct: 223 GIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGP---TIATLVSAVSAAAD 276
Score = 21.2 bits (43), Expect(2) = 4e-06
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVIT 524
+SLVD YA+ G + A F + ++ +++
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVS 332
>ref|XP_004965826.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g16470-like [Setaria italica]
Length = 425
Score = 107 bits (267), Expect(2) = 5e-23
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 2/132 (1%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y+ LLQECVN LGK +HA+M+A GF F+ TK+++ YA+ GDL ARKLFD
Sbjct: 38 YALLLQECVNRRDARLGKRIHARMIATGFRCGEFITTKLLIFYAKIGDLG---CARKLFD 94
Query: 196 EMPERNSTSWNTMILAYAR--VDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDF 369
MP+R+ +WN MI AR + AVELF ++ G+ PD+FTF S++ AC L
Sbjct: 95 GMPQRSVVAWNAMISGCARGGAEAQERAVELFGAIRAEGLAPDQFTFASVLCACARLAAL 154
Query: 370 DGICQVHGLIFK 405
+ +VH + K
Sbjct: 155 ERGRRVHAVAVK 166
Score = 26.2 bits (56), Expect(2) = 5e-23
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNV 518
S+LVD Y +C + A AFA E+NV
Sbjct: 177 SALVDMYLKCSCPEDARRAFAAAPERNV 204
>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
[Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 894
Score = 107 bits (266), Expect(2) = 6e-23
Identities = 56/135 (41%), Positives = 82/135 (60%)
Frame = +1
Query: 1 VHPSAYSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
V S Y LL+ C++SGS LG+ +HA+ PD F++TK++ +YA+ G +AD A
Sbjct: 79 VKRSTYLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYAKCGCIAD---A 134
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
RK+FD M ERN +W+ MI AY+R + E +LF LM K G+LPD F FP I++ C
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 361 EDFDGICQVHGLIFK 405
D + +H ++ K
Sbjct: 195 GDVEAGKVIHSVVIK 209
Score = 26.2 bits (56), Expect(2) = 6e-23
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
+S++ YA+CG +D A F + E++VI +V+
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Score = 69.3 bits (168), Expect = 6e-10
Identities = 38/106 (35%), Positives = 59/106 (55%)
Frame = +1
Query: 25 LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFDEMP 204
+LQ C N G E GK +H+ ++ G + + I+ +YA+ G+L A K F M
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD---FATKFFRRMR 243
Query: 205 ERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIV 342
ER+ +WN+++LAY + H EAVEL M+K GI P T+ ++
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
>ref|XP_004234765.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Solanum lycopersicum]
Length = 499
Score = 102 bits (253), Expect(2) = 8e-23
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = +1
Query: 16 YSFLLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVARKLFD 195
Y +L EC+N + G+ +HA M+ + P +L+T++I+ Y + G L D AR +FD
Sbjct: 40 YDTVLNECINQRAIREGQRVHAHMIKSHYQPPVYLRTRLIVFYIKCGLLGD---ARWVFD 96
Query: 196 EMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTALEDFDG 375
EMP+RN SW +I Y++ D EA+ LF M SG P++FTF +++ +CT+ F
Sbjct: 97 EMPQRNVVSWTALISGYSQTGDISEAIHLFLQMLTSGTAPNEFTFATVLTSCTSAIGFQF 156
Query: 376 ICQVHGLIFKT 408
Q+H L+ K+
Sbjct: 157 GRQIHCLLVKS 167
Score = 30.8 bits (68), Expect(2) = 8e-23
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 411 FEL*FSCGSSLVDGYARCGSIDRAVAAFADIDEKNVITRITVI 539
FE GSSL+D YA+ G + A F ++ E++V++ +I
Sbjct: 169 FESHVYVGSSLLDMYAKAGKVHEARYIFENLPERDVVSCTAII 211
Score = 59.3 bits (142), Expect(2) = 5e-08
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Frame = +1
Query: 7 PSAYSF--LLQECVNSGSFELGKSMHAQMVADGFNPDTFLQTKIIMLYARSGDLADLYVA 180
P+ ++F +L C ++ F+ G+ +H +V F ++ + ++ +YA++G + + A
Sbjct: 136 PNEFTFATVLTSCTSAIGFQFGRQIHCLLVKSPFESHVYVGSSLLDMYAKAGKVHE---A 192
Query: 181 RKLFDEMPERNSTSWNTMILAYARVDDHIEAVELFYLMQKSGILPDKFTFPSIVRACTAL 360
R +F+ +PER+ S +I YA+ + EA++LF Q + + T+ S++ A + L
Sbjct: 193 RYIFENLPERDVVSCTAIISGYAQQGLYEEALDLFRKFQVERMSFNYVTYTSVLTALSGL 252
Query: 361 EDFDGICQVHGLIFK 405
+ Q+H I +
Sbjct: 253 AAVEEGRQLHARIIR 267
Score = 23.5 bits (49), Expect(2) = 5e-08
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 435 SSLVDGYARCGSIDRAVAAFADIDEKNV 518
+SL+D Y++CG + F + E+ V
Sbjct: 278 NSLIDMYSKCGKFTYSRMIFNQMSERTV 305