BLASTX nr result

ID: Sinomenium21_contig00048837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00048837
         (496 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007217362.1| hypothetical protein PRUPE_ppa021574mg [Prun...    59   7e-07
gb|EXB31946.1| hypothetical protein L484_013578 [Morus notabilis]      57   3e-06
ref|XP_006840156.1| hypothetical protein AMTR_s00089p00070210 [A...    56   6e-06
ref|XP_002323869.2| pentatricopeptide repeat-containing family p...    55   1e-05

>ref|XP_007217362.1| hypothetical protein PRUPE_ppa021574mg [Prunus persica]
            gi|462413512|gb|EMJ18561.1| hypothetical protein
            PRUPE_ppa021574mg [Prunus persica]
          Length = 994

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = +1

Query: 4    PDFRTHWALISNLSNSTNKSSGDGG-GFLSNLLSRSGFTGKKDSK 135
            PDF THW+LISNLSNS++K + +   GFL+ LLS SGF+ +KDSK
Sbjct: 946  PDFETHWSLISNLSNSSDKDNANSSRGFLARLLSSSGFSRQKDSK 990


>gb|EXB31946.1| hypothetical protein L484_013578 [Morus notabilis]
          Length = 1087

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = +1

Query: 4    PDFRTHWALISNLSNSTNKSSGDGG-GFLSNLLSRSGFTGKKDSK 135
            PDF THW+LI+ L  S NKS+ + G GFLS LLS SGF+ K DSK
Sbjct: 1041 PDFETHWSLINKLRTSFNKSNNESGQGFLSRLLSESGFSRKTDSK 1085


>ref|XP_006840156.1| hypothetical protein AMTR_s00089p00070210 [Amborella trichopoda]
            gi|548841855|gb|ERN01831.1| hypothetical protein
            AMTR_s00089p00070210 [Amborella trichopoda]
          Length = 1239

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/46 (60%), Positives = 33/46 (71%)
 Frame = +1

Query: 1    VPDFRTHWALISNLSNSTNKSSGDGGGFLSNLLSRSGFTGKKDSKG 138
            VPDF+THW+LISNLSN   +S+    GFLS LLS+SGF  K  S G
Sbjct: 1194 VPDFKTHWSLISNLSNDDKESNNK--GFLSRLLSQSGFLSKDSSLG 1237


>ref|XP_002323869.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550320105|gb|EEF04002.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 1255

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/43 (62%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +1

Query: 4    PDFRTHWALISNLSNSTNKS-SGDGGGFLSNLLSRSGFTGKKD 129
            PDF THW+LISNLSNS++K  +    GFLS+LL+ SGF+ KKD
Sbjct: 1207 PDFDTHWSLISNLSNSSDKDYNKSSQGFLSSLLAGSGFSSKKD 1249


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