BLASTX nr result
ID: Sinomenium21_contig00048835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00048835
(614 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma... 71 3e-10
emb|CBI35690.3| unnamed protein product [Vitis vinifera] 71 3e-10
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera] 71 3e-10
ref|XP_007159305.1| hypothetical protein PHAVU_002G226900g [Phas... 67 4e-09
ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal doma... 66 9e-09
ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal doma... 66 9e-09
ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal doma... 65 2e-08
ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [A... 64 3e-08
ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal doma... 64 3e-08
gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-l... 64 3e-08
ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Popu... 63 6e-08
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma... 61 3e-07
ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Popu... 60 5e-07
ref|XP_006848184.1| hypothetical protein AMTR_s00029p00237180 [A... 59 1e-06
ref|XP_007214548.1| hypothetical protein PRUPE_ppa000988mg [Prun... 58 2e-06
ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal doma... 58 2e-06
ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal doma... 58 2e-06
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma... 58 2e-06
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma... 57 6e-06
ref|XP_002519032.1| double-stranded RNA binding protein, putativ... 57 6e-06
>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Vitis vinifera]
Length = 860
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M+KS+VY+G+ ++GEVEIYPQNQ +++ KEIRISH+SQPSERC PL
Sbjct: 1 MYKSIVYEGDDVVGEVEIYPQNQGLELM-KEIRISHYSQPSERCPPL 46
>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M+KS+VY+G+ ++GEVEIYPQNQ +++ KEIRISH+SQPSERC PL
Sbjct: 1 MYKSIVYEGDDVVGEVEIYPQNQGLELM-KEIRISHYSQPSERCPPL 46
>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
Length = 894
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M+KS+VY+G+ ++GEVEIYPQNQ +++ KEIRISH+SQPSERC PL
Sbjct: 1 MYKSIVYEGDDVVGEVEIYPQNQGLELM-KEIRISHYSQPSERCPPL 46
>ref|XP_007159305.1| hypothetical protein PHAVU_002G226900g [Phaseolus vulgaris]
gi|561032720|gb|ESW31299.1| hypothetical protein
PHAVU_002G226900g [Phaseolus vulgaris]
Length = 964
Score = 67.0 bits (162), Expect = 4e-09
Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQ-NQIIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVYQG +LGEVE+YP+ N + KEIRISHFSQPSERC PL
Sbjct: 1 MYKSVVYQGEVVLGEVEVYPEENNYKNFHVKEIRISHFSQPSERCPPL 48
>ref|XP_006583810.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X2 [Glycine max]
Length = 929
Score = 65.9 bits (159), Expect = 9e-09
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +1
Query: 466 LKMFKSVVYQGNSLLGEVEIYPQ--NQIIDMSNKEIRISHFSQPSERCSPL 612
++M+KSVVYQG ++GEV++YP+ N + KEIRISHFSQPSERC PL
Sbjct: 1 MRMYKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPL 51
>ref|XP_003529311.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X1 [Glycine max]
Length = 956
Score = 65.9 bits (159), Expect = 9e-09
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Frame = +1
Query: 466 LKMFKSVVYQGNSLLGEVEIYPQ--NQIIDMSNKEIRISHFSQPSERCSPL 612
++M+KSVVYQG ++GEV++YP+ N + KEIRISHFSQPSERC PL
Sbjct: 1 MRMYKSVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPL 51
>ref|XP_004134718.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Cucumis sativus]
gi|449479317|ref|XP_004155567.1| PREDICTED: LOW QUALITY
PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 1-like [Cucumis sativus]
Length = 803
Score = 65.1 bits (157), Expect = 2e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 2/49 (4%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQ--NQIIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVY G+ LLG+VEIYP+ N ++ KEIRI+HFSQPSERC PL
Sbjct: 1 MYKSVVYHGDELLGDVEIYPEEKNGYKNIEVKEIRITHFSQPSERCPPL 49
>ref|XP_006827806.1| hypothetical protein AMTR_s00009p00267690 [Amborella trichopoda]
gi|548832426|gb|ERM95222.1| hypothetical protein
AMTR_s00009p00267690 [Amborella trichopoda]
Length = 942
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/49 (61%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMS--NKEIRISHFSQPSERCSPL 612
MFKS VY G+SLLGE E+YP+ + +++ KEIRISH S PSERC PL
Sbjct: 1 MFKSAVYHGDSLLGEAEVYPEREYLNLETITKEIRISHLSLPSERCPPL 49
>ref|XP_004505032.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Cicer arietinum]
Length = 951
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M+KS+VYQG +LGEV+IYP+ + + KEIRISHF+QPSERC PL
Sbjct: 1 MYKSLVYQGEVVLGEVDIYPEVNNNNKNFKEIRISHFTQPSERCLPL 47
>gb|EXB82798.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Morus
notabilis]
Length = 998
Score = 63.9 bits (154), Expect = 3e-08
Identities = 35/52 (67%), Positives = 39/52 (75%), Gaps = 5/52 (9%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYP-----QNQIIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVY+G LLGEVEIYP ++IID KEIRISHFS PSERC PL
Sbjct: 1 MYKSVVYKGKELLGEVEIYPGENNIDHRIID-DLKEIRISHFSPPSERCPPL 51
>ref|XP_002305017.2| hypothetical protein POPTR_0004s04010g [Populus trichocarpa]
gi|550340277|gb|EEE85528.2| hypothetical protein
POPTR_0004s04010g [Populus trichocarpa]
Length = 996
Score = 63.2 bits (152), Expect = 6e-08
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 13/60 (21%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQ-------------IIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVY+G+ LLGEVEIY Q Q +ID KEIRISHFSQ SERC PL
Sbjct: 1 MYKSVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVKEIRISHFSQTSERCPPL 60
>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like [Glycine max]
Length = 960
Score = 60.8 bits (146), Expect = 3e-07
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 8/55 (14%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQ--------NQIIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVYQG ++GEV++YP+ N + KEIRISHFSQPSERC PL
Sbjct: 1 MYKSVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPL 55
>ref|XP_006377325.1| hypothetical protein POPTR_0011s04910g [Populus trichocarpa]
gi|550327613|gb|ERP55122.1| hypothetical protein
POPTR_0011s04910g [Populus trichocarpa]
Length = 990
Score = 60.1 bits (144), Expect = 5e-07
Identities = 34/60 (56%), Positives = 37/60 (61%), Gaps = 13/60 (21%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQ-------------IIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVY+G LLGEVEIY Q Q +ID K IRISHFSQ SERC PL
Sbjct: 1 MYKSVVYKGEELLGEVEIYAQEQQQEEEENKNKRKRVIDEIVKGIRISHFSQASERCPPL 60
>ref|XP_006848184.1| hypothetical protein AMTR_s00029p00237180 [Amborella trichopoda]
gi|548851489|gb|ERN09765.1| hypothetical protein
AMTR_s00029p00237180 [Amborella trichopoda]
Length = 668
Score = 58.5 bits (140), Expect = 1e-06
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
Frame = +1
Query: 475 FKSVVYQGNSLLGEVEIYPQNQ---IIDMSNKEIRISHFSQPSERCSPL 612
F+S++Y G++ LGEV++ PQNQ I+ KEIRISH + PSERC PL
Sbjct: 6 FRSILYHGDTCLGEVDVVPQNQNPQILSAIKKEIRISHLTAPSERCPPL 54
>ref|XP_007214548.1| hypothetical protein PRUPE_ppa000988mg [Prunus persica]
gi|462410413|gb|EMJ15747.1| hypothetical protein
PRUPE_ppa000988mg [Prunus persica]
Length = 940
Score = 58.2 bits (139), Expect = 2e-06
Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 7/54 (12%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQ-------NQIIDMSNKEIRISHFSQPSERCSPL 612
M+KSVVY+G LLGEVEIYP+ N+ + KEIRIS+FSQ SERC P+
Sbjct: 1 MYKSVVYKGEELLGEVEIYPEENENKNKNKNLVDELKEIRISYFSQSSERCPPV 54
>ref|XP_006597421.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X3 [Glycine max]
Length = 932
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M +S+VY G +GEVEIYP+ + ++ KEIRISHFSQPSERC PL
Sbjct: 1 MKRSMVYHGEMEVGEVEIYPEEKK-NIDLKEIRISHFSQPSERCPPL 46
>ref|XP_006597420.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X2 [Glycine max]
Length = 937
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M +S+VY G +GEVEIYP+ + ++ KEIRISHFSQPSERC PL
Sbjct: 1 MKRSMVYHGEMEVGEVEIYPEEKK-NIDLKEIRISHFSQPSERCPPL 46
>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X1 [Glycine max]
Length = 958
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
M +S+VY G +GEVEIYP+ + ++ KEIRISHFSQPSERC PL
Sbjct: 1 MKRSMVYHGEMEVGEVEIYPEEKK-NIDLKEIRISHFSQPSERCPPL 46
>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
1-like isoform X1 [Glycine max]
gi|571500215|ref|XP_006594604.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 1-like
isoform X2 [Glycine max]
Length = 960
Score = 56.6 bits (135), Expect = 6e-06
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 481 SVVYQGNSLLGEVEIYPQNQIIDMSNKEIRISHFSQPSERCSPL 612
S+VY G +GEV+IYP+ +M KEIRISHFSQPSERC PL
Sbjct: 4 SMVYHGEMAVGEVKIYPEENK-NMDLKEIRISHFSQPSERCPPL 46
>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223541695|gb|EEF43243.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 978
Score = 56.6 bits (135), Expect = 6e-06
Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 20/67 (29%)
Frame = +1
Query: 472 MFKSVVYQGNSLLGEVEIYPQNQ--------------------IIDMSNKEIRISHFSQP 591
M+KSVVY+G+ LLGEVEIY Q + +ID K IRISHFSQ
Sbjct: 1 MYKSVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILKGIRISHFSQA 60
Query: 592 SERCSPL 612
SERC PL
Sbjct: 61 SERCPPL 67