BLASTX nr result
ID: Sinomenium21_contig00048781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00048781
(330 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-... 119 3e-25
ref|XP_007012690.1| Replication protein A 1A [Theobroma cacao] g... 119 4e-25
ref|XP_004513472.1| PREDICTED: replication protein A 70 kDa DNA-... 116 3e-24
ref|XP_006490819.1| PREDICTED: replication protein A 70 kDa DNA-... 112 4e-23
ref|XP_006451564.1| hypothetical protein CICLE_v10010492mg [Citr... 112 4e-23
ref|XP_006408983.1| hypothetical protein EUTSA_v10001929mg [Eutr... 112 5e-23
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-... 112 5e-23
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-... 112 5e-23
ref|NP_973433.1| replication factor A 1A [Arabidopsis thaliana] ... 112 7e-23
ref|NP_178690.1| replication factor A 1A [Arabidopsis thaliana] ... 112 7e-23
ref|XP_006297186.1| hypothetical protein CARUB_v10013190mg [Caps... 111 9e-23
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-... 111 9e-23
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab... 110 2e-22
ref|XP_006338140.1| PREDICTED: replication protein A 70 kDa DNA-... 110 3e-22
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici... 109 3e-22
dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa Japoni... 108 6e-22
ref|NP_001048287.1| Os02g0776800 [Oryza sativa Japonica Group] g... 108 6e-22
gb|EAY87732.1| hypothetical protein OsI_09147 [Oryza sativa Indi... 108 6e-22
gb|EYU25874.1| hypothetical protein MIMGU_mgv1a002777mg [Mimulus... 108 8e-22
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum] 107 1e-21
>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
product [Vitis vinifera]
Length = 622
Score = 119 bits (299), Expect = 3e-25
Identities = 64/109 (58%), Positives = 72/109 (66%)
Frame = +1
Query: 4 ENDSTSQKALSDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPIV 183
E+ ST+QK N ++ + NN N G+KM F HG I+
Sbjct: 112 ESHSTAQKEFPGGNRARSVGVTNNNLSVQNGGNKMPSFRPSVQPPFQPPPNYKS-HGTIL 170
Query: 184 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 171 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 219
>ref|XP_007012690.1| Replication protein A 1A [Theobroma cacao]
gi|508783053|gb|EOY30309.1| Replication protein A 1A
[Theobroma cacao]
Length = 628
Score = 119 bits (298), Expect = 4e-25
Identities = 62/109 (56%), Positives = 77/109 (70%)
Frame = +1
Query: 4 ENDSTSQKALSDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPIV 183
++DST+ K+L ++NS+ ++++S P + +Q F GPI+
Sbjct: 112 DSDSTTNKSLPNSNSEPSVRSSNYKYRANVPTNNVQSFRPTIQPPYQPPPNYKI-QGPIM 170
Query: 184 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 171 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 219
>ref|XP_004513472.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 628
Score = 116 bits (291), Expect = 3e-24
Identities = 60/110 (54%), Positives = 74/110 (67%)
Frame = +1
Query: 1 MENDSTSQKALSDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPI 180
++++ QKAL N +++ ++S +N N G +Q F G +
Sbjct: 115 VDSELPIQKALHGNTVESSSRSSNSNLAAQNAGSNVQSFRPTIQPAYQPPPMYKG-RGAV 173
Query: 181 VKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
VKNEAPAR+IPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 174 VKNEAPARVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 223
>ref|XP_006490819.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
isoform X2 [Citrus sinensis]
Length = 560
Score = 112 bits (281), Expect = 4e-23
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 103 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 156
>ref|XP_006451564.1| hypothetical protein CICLE_v10010492mg [Citrus clementina]
gi|568875472|ref|XP_006490818.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit A-like isoform X1
[Citrus sinensis] gi|557554790|gb|ESR64804.1|
hypothetical protein CICLE_v10010492mg [Citrus
clementina]
Length = 653
Score = 112 bits (281), Expect = 4e-23
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 196 HGPILKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 249
>ref|XP_006408983.1| hypothetical protein EUTSA_v10001929mg [Eutrema salsugineum]
gi|557110139|gb|ESQ50436.1| hypothetical protein
EUTSA_v10001929mg [Eutrema salsugineum]
Length = 642
Score = 112 bits (280), Expect = 5e-23
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNA+GDGKVFSFD
Sbjct: 185 HGPIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFD 238
>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 623
Score = 112 bits (280), Expect = 5e-23
Identities = 59/109 (54%), Positives = 70/109 (64%)
Frame = +1
Query: 4 ENDSTSQKALSDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPIV 183
++++ +QKA N + K + NP +Q F HG I+
Sbjct: 112 QSENFAQKATPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKN-HGAII 170
Query: 184 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNA+GDGKVFSFD
Sbjct: 171 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFD 219
>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 694
Score = 112 bits (280), Expect = 5e-23
Identities = 59/109 (54%), Positives = 70/109 (64%)
Frame = +1
Query: 4 ENDSTSQKALSDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPIV 183
++++ +QKA N + K + NP +Q F HG I+
Sbjct: 112 QSENFAQKATPSVNLEQPAKVGNGHLSARNPVHNVQSFQATVQPPYQPPPNYKN-HGAII 170
Query: 184 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNA+GDGKVFSFD
Sbjct: 171 KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFD 219
>ref|NP_973433.1| replication factor A 1A [Arabidopsis thaliana]
gi|330250915|gb|AEC06009.1| replication factor A 1A
[Arabidopsis thaliana]
Length = 617
Score = 112 bits (279), Expect = 7e-23
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGDIRRYNNA+GDGKVFSFD
Sbjct: 162 HGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFD 215
>ref|NP_178690.1| replication factor A 1A [Arabidopsis thaliana]
gi|75337354|sp|Q9SKI4.1|RFA1A_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit A;
Short=AtRPA70A; AltName: Full=AtRPA1-3; AltName:
Full=Replication factor A protein 1A; AltName:
Full=Replication protein A 1A; Short=AtRPA1A
gi|4584356|gb|AAD25150.1| putative replication protein
A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
putative replication protein A1 [Arabidopsis thaliana]
gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
thaliana] gi|330250916|gb|AEC06010.1| replication factor
A 1A [Arabidopsis thaliana]
Length = 640
Score = 112 bits (279), Expect = 7e-23
Identities = 51/54 (94%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGDIRRYNNA+GDGKVFSFD
Sbjct: 185 HGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFD 238
>ref|XP_006297186.1| hypothetical protein CARUB_v10013190mg [Capsella rubella]
gi|482565895|gb|EOA30084.1| hypothetical protein
CARUB_v10013190mg [Capsella rubella]
Length = 640
Score = 111 bits (278), Expect = 9e-23
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPAR+IPIAALNPYQGRWAIKAR+TAKGDIRRYNNA+GDGKVFSFD
Sbjct: 185 HGPIMKNEAPARVIPIAALNPYQGRWAIKARITAKGDIRRYNNAKGDGKVFSFD 238
>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Glycine max]
Length = 637
Score = 111 bits (278), Expect = 9e-23
Identities = 62/110 (56%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Frame = +1
Query: 10 DSTSQ---KALSDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPI 180
DST + ++ + NNS A S NN+ P GP+
Sbjct: 133 DSTVENLPRSYNSNNSSAGQNASHNNTQNFRP----------TIQPPYQPPPLYKGRGPV 182
Query: 181 VKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
VKNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 183 VKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 232
>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
Length = 640
Score = 110 bits (276), Expect = 2e-22
Identities = 50/54 (92%), Positives = 54/54 (100%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HGPI+KNEAPAR+IPIAALNPYQGRWAIKARVTAKGDIRRYNNA+GDGKV+SFD
Sbjct: 185 HGPIMKNEAPARVIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVYSFD 238
>ref|XP_006338140.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Solanum tuberosum]
Length = 653
Score = 110 bits (274), Expect = 3e-22
Identities = 59/99 (59%), Positives = 68/99 (68%)
Frame = +1
Query: 34 SDNNSDATLKTSKNNSIPLNPGDKMQMFXXXXXXXXXXXXXXXXXHGPIVKNEAPARIIP 213
+ ++ A+ SKN S N G+ MQ + HG I+KNEAPARIIP
Sbjct: 139 AQRSAQASFANSKNLSAQ-NSGNSMQNYPPAIQPAYQPPPNYKN-HGAIMKNEAPARIIP 196
Query: 214 IAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
IAALNPYQGRWAIKARVTAKGD+RRYNN+RGDGKVFSFD
Sbjct: 197 IAALNPYQGRWAIKARVTAKGDLRRYNNSRGDGKVFSFD 235
>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
gi|223546518|gb|EEF48016.1| replication factor A 1,
rfa1, putative [Ricinus communis]
Length = 670
Score = 109 bits (273), Expect = 3e-22
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HG I+KNEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 212 HGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 265
>dbj|BAB40712.1| replication protein A 70kDa [Oryza sativa Japonica Group]
Length = 654
Score = 108 bits (271), Expect = 6e-22
Identities = 63/120 (52%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Frame = +1
Query: 7 NDSTSQKALSDNNSDATLKTSKN-----NSIPLN-------PGDKMQMFXXXXXXXXXXX 150
N + ++ N+S+ T K S N NS+ N P DK+ +F
Sbjct: 132 NGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPA 191
Query: 151 XXXXXXHGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HG I+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGDIRRY+NA+GDGKVFSFD
Sbjct: 192 PNYKN-HGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFD 250
>ref|NP_001048287.1| Os02g0776800 [Oryza sativa Japonica Group]
gi|75325348|sp|Q6YZ49.1|RFA1A_ORYSJ RecName:
Full=Replication protein A 70 kDa DNA-binding subunit A;
Short=OsRPA70a; AltName: Full=Replication factor A
protein 1A; AltName: Full=Replication protein A 1A
gi|46805512|dbj|BAD16963.1| replication protein A 70kDa
[Oryza sativa Japonica Group]
gi|46806154|dbj|BAD17384.1| replication protein A 70kDa
[Oryza sativa Japonica Group]
gi|113537818|dbj|BAF10201.1| Os02g0776800 [Oryza sativa
Japonica Group] gi|125583873|gb|EAZ24804.1| hypothetical
protein OsJ_08582 [Oryza sativa Japonica Group]
gi|215701492|dbj|BAG92916.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215715207|dbj|BAG94958.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 656
Score = 108 bits (271), Expect = 6e-22
Identities = 63/120 (52%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Frame = +1
Query: 7 NDSTSQKALSDNNSDATLKTSKN-----NSIPLN-------PGDKMQMFXXXXXXXXXXX 150
N + ++ N+S+ T K S N NS+ N P DK+ +F
Sbjct: 134 NGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPA 193
Query: 151 XXXXXXHGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HG I+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGDIRRY+NA+GDGKVFSFD
Sbjct: 194 PNYKN-HGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFD 252
>gb|EAY87732.1| hypothetical protein OsI_09147 [Oryza sativa Indica Group]
Length = 658
Score = 108 bits (271), Expect = 6e-22
Identities = 63/120 (52%), Positives = 75/120 (62%), Gaps = 12/120 (10%)
Frame = +1
Query: 7 NDSTSQKALSDNNSDATLKTSKN-----NSIPLN-------PGDKMQMFXXXXXXXXXXX 150
N + ++ N+S+ T K S N NS+ N P DK+ +F
Sbjct: 136 NGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPA 195
Query: 151 XXXXXXHGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HG I+KNEAPARIIPI+ALNPYQGRWAIKARVTAKGDIRRY+NA+GDGKVFSFD
Sbjct: 196 PNYKN-HGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFD 254
>gb|EYU25874.1| hypothetical protein MIMGU_mgv1a002777mg [Mimulus guttatus]
Length = 638
Score = 108 bits (270), Expect = 8e-22
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = +1
Query: 169 HGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
HG I++NEAPARIIPIAALNPYQGRWAIKARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 180 HGAIMRNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFD 233
>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
Length = 637
Score = 107 bits (268), Expect = 1e-21
Identities = 58/118 (49%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Frame = +1
Query: 1 MENDSTSQKALSDNNSDATLKTSKNNSI--------PLNPGDKMQMFXXXXXXXXXXXXX 156
++++ QKAL DN +++ ++ NNS N G
Sbjct: 115 VDSELPVQKALRDNTVGSSINSNNNNSYNSNSNILAAQNTGSTHVQNFRPTIQPSYKPPP 174
Query: 157 XXXXHGPIVKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFD 330
G ++KNEAPAR IPIAALNPYQGRWAI+ARVTAKGD+RRYNNARGDGKVFSFD
Sbjct: 175 VYKGRGAVMKNEAPARTIPIAALNPYQGRWAIRARVTAKGDLRRYNNARGDGKVFSFD 232