BLASTX nr result

ID: Sinomenium21_contig00048711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00048711
         (468 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC08475.1| hypothetical protein L484_009618 [Morus notabilis]      67   2e-09
emb|CBI20261.3| unnamed protein product [Vitis vinifera]               64   3e-08
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-08
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]    64   3e-08
ref|XP_007021561.1| Tetratricopeptide repeat (TPR)-like superfam...    60   3e-07
ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat...    58   2e-06
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat...    56   5e-06
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    56   5e-06

>gb|EXC08475.1| hypothetical protein L484_009618 [Morus notabilis]
          Length = 530

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/82 (37%), Positives = 47/82 (57%)
 Frame = +2

Query: 221 TFANQSAIDPSVGVEESTVAMDAFKVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXX 400
           +FAN +  D   G     +A+    +QN++K     S E++ + LD CG  LTE+     
Sbjct: 72  SFANSADSDEFEGDPNDRIAV---WIQNIIKFRREKSTEEIERALDMCGFELTEELLLNV 128

Query: 401 XXXHRSDWRLAFLFFNWACERG 466
              H+SDW+LA++FFNWAC+ G
Sbjct: 129 LHRHQSDWKLAYVFFNWACKGG 150


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/60 (50%), Positives = 39/60 (65%)
 Frame = +2

Query: 287 AFKVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLFFNWACERG 466
           A +VQNLLK + +SS+ ++   L QC LSLT+D        HRSDWR A++FFNWA   G
Sbjct: 87  ALEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCG 146


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/60 (50%), Positives = 39/60 (65%)
 Frame = +2

Query: 287 AFKVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLFFNWACERG 466
           A +VQNLLK + +SS+ ++   L QC LSLT+D        HRSDWR A++FFNWA   G
Sbjct: 87  ALEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCG 146


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/60 (50%), Positives = 39/60 (65%)
 Frame = +2

Query: 287 AFKVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLFFNWACERG 466
           A +VQNLLK + +SS+ ++   L QC LSLT+D        HRSDWR A++FFNWA   G
Sbjct: 87  ALEVQNLLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCG 146


>ref|XP_007021561.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508721189|gb|EOY13086.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 534

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/58 (43%), Positives = 39/58 (67%)
 Frame = +2

Query: 293 KVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLFFNWACERG 466
           ++QN+L  H NSS+E++ Q LDQC +++TE         +RSDW+LA +FF W  ++G
Sbjct: 79  ELQNILNNHRNSSIEEIEQALDQCEVTMTEGLALDLVRRNRSDWKLAHVFFQWVSKKG 136


>ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Glycine max]
          Length = 481

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/53 (49%), Positives = 31/53 (58%)
 Frame = +2

Query: 296 VQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLFFNWA 454
           +QNLLK   +   E+L + LDQCG  L  D        HRSDWR A +FFNWA
Sbjct: 39  IQNLLKFRRDKPTEQLYRALDQCGFDLNHDLVLDVLRRHRSDWRPAHVFFNWA 91


>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
           gi|449502917|ref|XP_004161779.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
 Frame = +2

Query: 128 QHQMLRKTLPFAVPT--RELNIESXXXXXXXSC--------TFANQSAIDPSVGVEESTV 277
           Q  ++++ LP  +PT  R  ++ S       SC           +++ +  S+ V +  +
Sbjct: 25  QSNLVKRFLPH-IPTSHRPFSVVSDPIHHILSCHNLTPSPRNCHDRTLVSDSIAVSDEPI 83

Query: 278 AM-----DAFKVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLF 442
            +      A  VQN+L    +  +E + + L  C L LT+D        HRSDW  AF+F
Sbjct: 84  TVHPDDPSAVYVQNVLYFRRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIF 143

Query: 443 FNWACERG 466
           FNW  +RG
Sbjct: 144 FNWVLKRG 151


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/60 (43%), Positives = 35/60 (58%)
 Frame = +2

Query: 287 AFKVQNLLKLHANSSMEKLGQVLDQCGLSLTEDXXXXXXXXHRSDWRLAFLFFNWACERG 466
           A KVQN+LK + +S   K+   L QC  ++TED        HRSDW+ A +FFNW  + G
Sbjct: 49  ALKVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGG 108


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