BLASTX nr result
ID: Sinomenium21_contig00048699
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00048699
(325 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI27249.3| unnamed protein product [Vitis vinifera] 135 5e-30
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi... 135 5e-30
ref|XP_007045956.1| Pentatricopeptide repeat superfamily protein... 121 1e-25
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi... 112 5e-23
ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi... 96 4e-18
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr... 96 4e-18
ref|XP_006395709.1| hypothetical protein EUTSA_v10005367mg, part... 89 8e-16
ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Caps... 87 3e-15
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar... 84 2e-14
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp.... 82 6e-14
ref|XP_007226957.1| hypothetical protein PRUPE_ppa002695mg [Prun... 81 2e-13
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 80 2e-13
ref|XP_002316102.2| pentatricopeptide repeat-containing family p... 80 4e-13
gb|EYU28824.1| hypothetical protein MIMGU_mgv1a026731mg [Mimulus... 75 1e-11
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_007158618.1| hypothetical protein PHAVU_002G167800g [Phas... 70 2e-10
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar... 64 2e-08
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ... 64 2e-08
ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 62 8e-08
>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 135 bits (341), Expect = 5e-30
Identities = 65/98 (66%), Positives = 83/98 (84%)
Frame = +1
Query: 31 RTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTHD 210
R LT ++LQ+ P+ID +++S +SI SNP FSLLG+C VSSLRKIH+LL+VHGL+ D
Sbjct: 61 RNLTVTALQRT---PEIDRTIASIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSED 117
Query: 211 LLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
LLCETKLVS+YG FGH+E A+L+FD+I+NPDLYSWKVM
Sbjct: 118 LLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVM 155
>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein
VITISV_009460 [Vitis vinifera]
Length = 700
Score = 135 bits (341), Expect = 5e-30
Identities = 65/98 (66%), Positives = 83/98 (84%)
Frame = +1
Query: 31 RTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTHD 210
R LT ++LQ+ P+ID +++S +SI SNP FSLLG+C VSSLRKIH+LL+VHGL+ D
Sbjct: 14 RNLTVTALQRT---PEIDRTIASIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSED 70
Query: 211 LLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
LLCETKLVS+YG FGH+E A+L+FD+I+NPDLYSWKVM
Sbjct: 71 LLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVM 108
>ref|XP_007045956.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508709891|gb|EOY01788.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 714
Score = 121 bits (303), Expect = 1e-25
Identities = 55/103 (53%), Positives = 75/103 (72%)
Frame = +1
Query: 16 KPKLLRTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVH 195
KP T + + PLE P +D +++S SI NP F+LLGLC N+ SL+K+H+L +++
Sbjct: 21 KPCFQLTCLSYTTDHPLEYPSMDRTLASMHSISLNPCFALLGLCRNIDSLKKVHALFVIN 80
Query: 196 GLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
G+ DLLC+TKLVS+YG FGHI A+L+FDQI +PD YSWKVM
Sbjct: 81 GIKGDLLCDTKLVSLYGLFGHIGCARLMFDQIPDPDFYSWKVM 123
>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 112 bits (280), Expect = 5e-23
Identities = 51/99 (51%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Frame = +1
Query: 31 RTLTNSSLQQPL-EPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTH 207
RTLT+ + P +PP+I + +ST SI++NP F+LL +C N+ SL+K+H+LL+VHGL++
Sbjct: 20 RTLTHFTYNPPPPDPPEISEAKASTHSIFTNPAFNLLVMCRNIDSLKKVHTLLVVHGLSN 79
Query: 208 DLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
D LC TKL+S+Y FG ++ A+LVFD+I +PD YS K M
Sbjct: 80 DPLCHTKLISLYASFGRVDCARLVFDEIPSPDFYSSKAM 118
>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 709
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/104 (50%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +1
Query: 16 KPKL-LRTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIV 192
KPKL LR L+ ++ Q P + ++D + +S S+ S P +LLGLC + SL+ H+LLIV
Sbjct: 16 KPKLQLRFLSYTNQQTPTQH-ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV 74
Query: 193 HGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
GLT+D C TKLVSMYG FGH++ A+ VFD + NPD YS++VM
Sbjct: 75 DGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
gi|557540977|gb|ESR52021.1| hypothetical protein
CICLE_v10033606mg [Citrus clementina]
Length = 716
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/104 (50%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +1
Query: 16 KPKL-LRTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIV 192
KPKL LR L+ ++ Q P + ++D + +S S+ S P +LLGLC + SL+ H+LLIV
Sbjct: 16 KPKLQLRFLSYTNQQTPTQH-ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV 74
Query: 193 HGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
GLT+D C TKLVSMYG FGH++ A+ VFD + NPD YS++VM
Sbjct: 75 DGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
>ref|XP_006395709.1| hypothetical protein EUTSA_v10005367mg, partial [Eutrema
salsugineum] gi|557092348|gb|ESQ32995.1| hypothetical
protein EUTSA_v10005367mg, partial [Eutrema salsugineum]
Length = 667
Score = 88.6 bits (218), Expect = 8e-16
Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +1
Query: 25 LLRTLTNSSLQQPLEPPQIDP-SVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGL 201
L R + +++Q+ + P D S +S S P F LL C N+ SLRK H +L V G
Sbjct: 21 LQRCIQFTTIQELILPEDNDDESTTSLHYAASIPCFRLLSKCTNIDSLRKAHGMLTVDGR 80
Query: 202 THDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
D+ C TKLVS+YG FG+ + A+LVFDQI PD Y WKVM
Sbjct: 81 MGDISCATKLVSLYGEFGYTKDARLVFDQIPEPDFYLWKVM 121
>ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Capsella rubella]
gi|482561043|gb|EOA25234.1| hypothetical protein
CARUB_v10018547mg [Capsella rubella]
Length = 701
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 82 DPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGFFGHI 261
D SS S+P F LL C N+ SLR+ H +L +GL D+L TK+VSMYG FG+
Sbjct: 38 DKDESSMHYAASSPCFLLLSKCTNIGSLRQAHGVLTGNGLMGDILIATKIVSMYGSFGYT 97
Query: 262 ESAQLVFDQIQNPDLYSWKVM 324
+ A+L+FDQI PD YSWKVM
Sbjct: 98 KDARLMFDQIPEPDFYSWKVM 118
>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/77 (53%), Positives = 51/77 (66%)
Frame = +1
Query: 94 SSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGFFGHIESAQ 273
SS S+P F LL C N+ SLR+ H +L +GL D+ TKLVS+YGFFG+ + A+
Sbjct: 37 SSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 274 LVFDQIQNPDLYSWKVM 324
LVFDQI PD Y WKVM
Sbjct: 97 LVFDQIPEPDFYLWKVM 113
>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/99 (45%), Positives = 61/99 (61%)
Frame = +1
Query: 28 LRTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTH 207
+R T +++Q+ L P+ D SS S P F LL C N+ SLR+ H +L +GL
Sbjct: 29 MRCFTFTTIQE-LNLPE-DNDESSLNYAASRPCFLLLSKCTNIDSLRQAHGVLTGNGLMG 86
Query: 208 DLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
D+ TKLVS+YG FG+ + A+LVFDQI PD Y WKV+
Sbjct: 87 DISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVI 125
>ref|XP_007226957.1| hypothetical protein PRUPE_ppa002695mg [Prunus persica]
gi|462423893|gb|EMJ28156.1| hypothetical protein
PRUPE_ppa002695mg [Prunus persica]
Length = 644
Score = 80.9 bits (198), Expect = 2e-13
Identities = 32/51 (62%), Positives = 46/51 (90%)
Frame = +1
Query: 172 IHSLLIVHGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
+HSLL++HGL++DLLC TKL+S+YG FG+++ A+L+FDQ+ +PD YSWKVM
Sbjct: 3 VHSLLVLHGLSNDLLCRTKLISLYGSFGYVKCARLLFDQMPSPDFYSWKVM 53
>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +1
Query: 151 NVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
N+ +L K H LLIVHGL +LLC+TKLV +YG G + SA++VFDQ+ NPD Y+WKVM
Sbjct: 1132 NIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVM 1189
>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329982|gb|EEF02273.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 665
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +1
Query: 142 LCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWKV 321
LC+N+++L ++H+ L+V GLT DL C TKLVS+YG FG ++ A+LVFD I +PD SWKV
Sbjct: 14 LCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKV 73
Query: 322 M 324
+
Sbjct: 74 I 74
>gb|EYU28824.1| hypothetical protein MIMGU_mgv1a026731mg [Mimulus guttatus]
Length = 619
Score = 75.1 bits (183), Expect = 1e-11
Identities = 45/104 (43%), Positives = 63/104 (60%)
Frame = +1
Query: 7 TICKPKLLRTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLL 186
T+ KP T++ S+ E +S +SI NP F LL LC ++SSL+ ++LL
Sbjct: 15 TVSKPYSQFTISTSAQFHNTE-------FNSIQSISENPTFCLLNLCRSISSLQ--NTLL 65
Query: 187 IVHGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDLYSWK 318
IV G T D L +TKLV MYG FG++ A+L+FD+I +PD S K
Sbjct: 66 IVDGGTDDPLLKTKLVGMYGLFGYVNKARLLFDEIPHPDFGSCK 109
>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/70 (45%), Positives = 47/70 (67%)
Frame = +1
Query: 115 SNPVFSLLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQ 294
S P F L LC N+ SL+ +H+ ++HGLT+DLL TKL+S+Y FG + A+ +F+ +
Sbjct: 33 SPPTFYLSRLCTNLPSLKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLP 92
Query: 295 NPDLYSWKVM 324
DLY +KVM
Sbjct: 93 TRDLYCFKVM 102
>ref|XP_007158618.1| hypothetical protein PHAVU_002G167800g [Phaseolus vulgaris]
gi|561032033|gb|ESW30612.1| hypothetical protein
PHAVU_002G167800g [Phaseolus vulgaris]
Length = 702
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/66 (50%), Positives = 48/66 (72%)
Frame = +1
Query: 127 FSLLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGFFGHIESAQLVFDQIQNPDL 306
F L LC N+ SL+K+H+ L+V GL+ +LL TKL+S+YG FG + A+ +FD + + DL
Sbjct: 41 FYLSRLCTNLESLQKLHASLVVQGLSRELLLSTKLLSLYGSFGVLHRARTLFDLLPSRDL 100
Query: 307 YSWKVM 324
YS+KVM
Sbjct: 101 YSFKVM 106
>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26630, chloroplastic; Flags: Precursor
gi|1402883|emb|CAA66814.1| hypothetical protein
[Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
[Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
unnamed protein product [Arabidopsis thaliana]
gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
thaliana] gi|23198064|gb|AAN15559.1| unknown protein
[Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +1
Query: 85 PSVSSTRSIYSNPVFS------LLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYG 246
PS SS ++ S P F L C+N S L++IH+ +I H LT+D L +L+S+
Sbjct: 4 PSPSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSS 63
Query: 247 FFGHIESAQLVFDQIQNPDLYSWKVM 324
FG + A LVF+Q+Q+P ++W +M
Sbjct: 64 SFGETQYASLVFNQLQSPSTFTWNLM 89
>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322823|gb|EFH53244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 451
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +1
Query: 85 PSVSSTRSIYSNPVFS------LLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYG 246
PS SS ++ S P F L C+N S L++IH+ +I H LT+D L +L+S+
Sbjct: 4 PSPSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSS 63
Query: 247 FFGHIESAQLVFDQIQNPDLYSWKVM 324
FG + A LVF+Q+Q+P ++W +M
Sbjct: 64 SFGETQYASLVFNQLQSPSTFTWNLM 89
>ref|XP_006480615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Citrus sinensis]
Length = 746
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Frame = +1
Query: 19 PKLLRTLTNSSLQQPLEPPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHG 198
P+ + TL+ + P P +V++ + +PVFSL+ C N+ L++IH+ ++ G
Sbjct: 7 PQHMETLSTPVISLPRHPNPTTLTVNNGHQHHPHPVFSLIKQCKNIKQLKQIHTQMLRTG 66
Query: 199 LTHDLLCETKLVS--MYGFFGHIESAQLVFDQIQNPDLYSWKVM 324
L D +KL + G F +E A+ +FDQI P+LY+W +
Sbjct: 67 LFFDPYSASKLFTPCALGTFSSLEYAREMFDQIPQPNLYTWNTL 110
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/85 (36%), Positives = 45/85 (52%)
Frame = +1
Query: 70 PPQIDPSVSSTRSIYSNPVFSLLGLCNNVSSLRKIHSLLIVHGLTHDLLCETKLVSMYGF 249
P +D + R I N +F C V +++H+LL+V G T + KL++ Y F
Sbjct: 31 PKYLDGVENEKREIDFNRIFLY---CTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAF 87
Query: 250 FGHIESAQLVFDQIQNPDLYSWKVM 324
G I A+L FDQIQ D+Y+W M
Sbjct: 88 LGDIPHARLTFDQIQTKDVYTWNSM 112