BLASTX nr result

ID: Sinomenium21_contig00048605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00048605
         (336 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256...    39   1e-06
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    40   5e-06

>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
           lycopersicum]
          Length = 421

 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = -2

Query: 269 SKVLANRIKESL--IF**AGIAFRPG*LIQENILMSDKVVRGFSRKNNTPSSLKKINLAK 96
           SKV+ NR+ + +  +   + + F  G  I ENIL++ ++V  ++RKN +P S+ KI+L K
Sbjct: 196 SKVITNRMHDVIHNVICDSQVGFILGRKISENILLAHELVNSYTRKNISPRSMLKIDLQK 255



 Score = 38.9 bits (89), Expect(2) = 1e-06
 Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
 Frame = -1

Query: 105 LGKIYDTIGWCYLQKIV----YPDPFIRWIMWCISVTNF 1
           L K+YD++ W +L++++    +PD F +W+M C+   N+
Sbjct: 253 LQKVYDSVEWPFLKQVMVGLGFPDMFTQWVMHCVKTVNY 291


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 40.0 bits (92), Expect(2) = 5e-06
 Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
 Frame = -2

Query: 269 SKVLANRIKESL--IF**AGIAFRPG*LIQENILMSDKVVRGFSRKNNTPSSLKKINLAK 96
           SK+L NR+K  +  +   A   F PG  I +NIL++ +++RG++RK+ +P  + K+++ K
Sbjct: 528 SKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRK 587



 Score = 35.8 bits (81), Expect(2) = 5e-06
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = -1

Query: 99  KIYDTIGWCYLQKIVY----PDPFIRWIMWCISVTNF 1
           K YD++ W +L+ ++Y    P  F+ WIM C+S  ++
Sbjct: 587 KAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSY 623


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