BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00048556
         (432 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007027797.1| Pentatricopeptide repeat superfamily protein...    83   4e-14
emb|CBI30318.3| unnamed protein product [Vitis vinifera]               81   1e-13
emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]    81   2e-13
ref|XP_006430161.1| hypothetical protein CICLE_v10013825mg [Citr...    77   3e-12
ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus c...    74   3e-11
ref|XP_004305656.1| PREDICTED: putative pentatricopeptide repeat...    73   5e-11
ref|XP_006851444.1| hypothetical protein AMTR_s00040p00103670 [A...    70   3e-10
gb|EXB39656.1| hypothetical protein L484_017129 [Morus notabilis]      67   3e-09
ref|XP_002323422.2| hypothetical protein POPTR_0016s07840g [Popu...    65   8e-09
ref|XP_006403786.1| hypothetical protein EUTSA_v10010201mg [Eutr...    64   3e-08
ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06

>ref|XP_007027797.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508716402|gb|EOY08299.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 809

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
 Frame = -1

Query: 291 QRFFFSSSAALIQISETQNAQIS---------ETQSSFSLDPKLYISALRNCNGVAQIKQ 139
           +RF   S + L  I++ Q              E+ SS  +DPK +ISAL NC  + +IK 
Sbjct: 16  ERFRLLSISTLAAIADAQETSPKLQTHMQNPLESHSSLRVDPKFFISALLNCKNIFEIKH 75

Query: 138 IHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFNDMSERDSF 1
           +HA+    GL  NL V NKLL++Y  Y AL  AYA F+ M ERD F
Sbjct: 76  VHAQVVANGLLNNLFVTNKLLYIYLQYGALGEAYAFFDGMRERDPF 121


>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 11/94 (11%)
 Frame = -1

Query: 252 ISETQNAQIS-------ETQSSFS----LDPKLYISALRNCNGVAQIKQIHARAAITGLT 106
           I ETQ  Q S       E  S F     L+PK YISAL NC  + Q++Q+HA+A++ G+ 
Sbjct: 51  IIETQFRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGML 110

Query: 105 QNLIVANKLLHVYTHYDALEHAYALFNDMSERDS 4
           +N++VANKL++ Y++Y AL+ AY LF+ M  RDS
Sbjct: 111 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -1

Query: 213 SSFSLDPKLYISALR----NCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALE 46
           SS  L  K+ +++L     NC  + Q++Q+HA+A++ G+ QNLIVANKL+H Y++Y AL+
Sbjct: 353 SSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALD 412

Query: 45  HAYALFNDMSERDS 4
            AY LF+ M  RDS
Sbjct: 413 DAYGLFDGMCVRDS 426


>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 34/66 (51%), Positives = 52/66 (78%)
 Frame = -1

Query: 201 LDPKLYISALRNCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFND 22
           L+PK YISAL NC  + Q++Q+HA+A++ G+ +N++VANKL++ Y++Y AL+ AY LF+ 
Sbjct: 60  LNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDG 119

Query: 21  MSERDS 4
           M  RDS
Sbjct: 120 MCVRDS 125



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/51 (50%), Positives = 39/51 (76%)
 Frame = -1

Query: 156 VAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFNDMSERDS 4
           + Q++Q+H +A++ G+ QNLIVANKL+  Y++Y AL+ AY LF+ M  RDS
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDS 801


>ref|XP_006430161.1| hypothetical protein CICLE_v10013825mg [Citrus clementina]
           gi|557532218|gb|ESR43401.1| hypothetical protein
           CICLE_v10013825mg [Citrus clementina]
          Length = 586

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 37/73 (50%), Positives = 51/73 (69%)
 Frame = -1

Query: 222 ETQSSFSLDPKLYISALRNCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEH 43
           + Q + S+DPK +IS+L +C  + QI+Q+HA+    G   NLIVANKLL++Y  + AL  
Sbjct: 6   DCQFTRSVDPKFFISSLLSCRNIFQIRQVHAQIVAGGTLTNLIVANKLLYIYALHKALTD 65

Query: 42  AYALFNDMSERDS 4
           A+ALFN M ERDS
Sbjct: 66  AHALFNGMKERDS 78


>ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
            gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130,
            putative [Ricinus communis]
          Length = 1530

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -1

Query: 321  LSFSVCKPEIQRFFFSSSAALIQISETQNAQISETQSSFSLDPKLYISALRNCNGVAQIK 142
            LS ++ +P+  +       A I    TQ  +IS    SF +DP   IS L NC  + QIK
Sbjct: 1046 LSDTISQPQFHQ------EATIDPPVTQILKISNPDFSFFMDPNCLISTLLNCKNICQIK 1099

Query: 141  QIHARAAITG-LTQNLIVANKLLHVYTHYDALEHAYALFNDMSERD 7
            Q+HA       L  NL VANKLL+VY H+  L  AYALF++M +++
Sbjct: 1100 QLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQKN 1145


>ref|XP_004305656.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Fragaria vesca subsp. vesca]
          Length = 601

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 35/97 (36%), Positives = 59/97 (60%)
 Frame = -1

Query: 300 PEIQRFFFSSSAALIQISETQNAQISETQSSFSLDPKLYISALRNCNGVAQIKQIHARAA 121
           P   +F  +S+ A   I+ +   ++ + Q     DP  +I+A+ +   ++ I+Q+HA+ A
Sbjct: 17  PRFHKFASASAIADTTITHSHIQEVPQPQIQPFSDPDFFITAVLSSRNISHIRQVHAQVA 76

Query: 120 ITGLTQNLIVANKLLHVYTHYDALEHAYALFNDMSER 10
           + G+ Q+L VANKLLH+Y  + AL  AYALF+ M E+
Sbjct: 77  VNGILQHLTVANKLLHMYVQHKALGDAYALFSGMVEK 113


>ref|XP_006851444.1| hypothetical protein AMTR_s00040p00103670 [Amborella trichopoda]
           gi|548855138|gb|ERN13025.1| hypothetical protein
           AMTR_s00040p00103670 [Amborella trichopoda]
          Length = 211

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = -1

Query: 360 ICLTSRFMFKFNNLSFSVCKPEIQRFFFSSSAALIQISET--QNAQISETQSSFSLDPKL 187
           I LTS ++F+   +S           F  S +  +  S      AQ S TQ +++ D  L
Sbjct: 13  ISLTS-YLFQAPWISIEFSSASASPAFHDSDSPPLHESPNPKSEAQNSYTQDAYTQDVNL 71

Query: 186 YISALRNCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFNDMSERD 7
           +ISAL  C  + Q+ Q+HA+A +TG  +NL ++NK +++Y  +  L+ A  +F+ M+ RD
Sbjct: 72  FISALLACKSLTQVSQVHAQAVVTGTAENLTLSNKFIYIYAQWRCLQDARKIFDRMNSRD 131

Query: 6   S 4
           +
Sbjct: 132 A 132


>gb|EXB39656.1| hypothetical protein L484_017129 [Morus notabilis]
          Length = 628

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = -1

Query: 285 FFFSSSAALIQISETQNAQISETQSSFS--LDPKLYISALRNCNGVAQIKQIHARAAITG 112
           F  +S+AA +  S+    + +   S FS  L+P+  ISAL     V+Q+K+I+A+  + G
Sbjct: 25  FRLASTAATMADSDALAPKSTSQTSPFSRPLEPRHVISALLLSRSVSQVKEIYAKVVVNG 84

Query: 111 LTQNLIVANKLLHVYTHYDALEHAYALFNDMSERDS 4
           + QN+ +ANKLL++Y  + A+   YALF  + E DS
Sbjct: 85  MLQNVTIANKLLYIYAQHKAVGDDYALFRSVEESDS 120


>ref|XP_002323422.2| hypothetical protein POPTR_0016s07840g [Populus trichocarpa]
           gi|550321072|gb|EEF05183.2| hypothetical protein
           POPTR_0016s07840g [Populus trichocarpa]
          Length = 574

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = -1

Query: 201 LDPKLYISALRNCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFND 22
           +DP  +IS L  C  + QIKQ+HA+   TG+  +LIVANKLL++   +  L  A+ LFN 
Sbjct: 1   MDPDFFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNK 60

Query: 21  MSERD 7
           M ERD
Sbjct: 61  MEERD 65


>ref|XP_006403786.1| hypothetical protein EUTSA_v10010201mg [Eutrema salsugineum]
           gi|557104905|gb|ESQ45239.1| hypothetical protein
           EUTSA_v10010201mg [Eutrema salsugineum]
          Length = 628

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
 Frame = -1

Query: 327 NNLSFSVCKPEIQRFFFSSSAALIQISETQNAQISETQS----SFSLDPKLYISALRNCN 160
           N + FS C         S++ A+   S  Q++ +S T S      S D   YISA+ +C 
Sbjct: 19  NKVRFSNC---------SAAYAVSDDSHEQSSSVSLTDSRSLPESSRDTGDYISAILSCK 69

Query: 159 GVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFNDMSERDS 4
            V  + +IHA+  + G  Q L VANKL+++Y  + A+  A ALF ++S +DS
Sbjct: 70  SVVDVGKIHAQVIVNGFLQELPVANKLIYIYAQFRAIADAEALFEEVSVKDS 121


>ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
           gi|449500964|ref|XP_004161240.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = -1

Query: 243 TQNAQISETQSSFSLDPKLYISALRNCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYT 64
           T  +Q SE       D K + S+L +C  + Q++Q+HA+ A  G  +NL VANKLL++Y 
Sbjct: 37  TPCSQESECSHVLHYDTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYV 96

Query: 63  HYDALEHAYALFNDMSERDSF 1
              ALE A  LF+ MS+R  +
Sbjct: 97  ERGALEDAQELFDGMSKRHPY 117


>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like isoform X1 [Glycine max]
           gi|571440956|ref|XP_006575303.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like isoform X2 [Glycine max]
          Length = 573

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -1

Query: 183 ISALRNCNGVAQIKQIHARAAITGLTQNLIVANKLLHVYTHYDALEHAYALFNDMSERDS 4
           I  L  C  V  I+Q+HA     G  Q+L++ANKLL+ Y  + A++ AY+LF+ ++ RDS
Sbjct: 7   IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDS 66