BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00048318
         (387 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    61   2e-07
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    56   5e-06
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    56   6e-06
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   56   6e-06
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ...    55   8e-06
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop...    55   8e-06

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +2

Query: 47   WRQLGTN-PSKWWWSLIWFPQHIPKHSLLMWKVAIDKVSSMEKLFKLKIVDNEFCTLCWT 223
            W  + T+ P + W+  +WFP   PK+S L+W    +++S+ +++          CTLC  
Sbjct: 1342 WNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNN 1401

Query: 224  GKETLDHLFFKCSFSKFI 277
             +ET DHLFF C ++ ++
Sbjct: 1402 AEETRDHLFFSCQYTSYV 1419


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +2

Query: 47   WRQLGTNPSK-WWWSLIWFPQHIPKHSLLMWKVAIDKVSSMEKLFKLKIVDNEFCTLCWT 223
            W  + T  +K  W+  +WF Q  PK S  +W  A+D++S+ +++   K V +  C  C  
Sbjct: 1268 WNNIRTTATKVTWYKGVWFYQATPKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNH 1327

Query: 224  GKETLDHLFFKCSFS 268
              ++ DHLFF C +S
Sbjct: 1328 PTKSRDHLFFNCPYS 1342


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +2

Query: 47  WRQLGT-NPSKWWWSLIWFPQHIPKHSLLMWKVAIDKVSSMEKLFKLKIVDNEFCTLCWT 223
           WR L   + S  W   +WF   +PKH+ + W  A +++ + ++L    ++    C LC  
Sbjct: 570 WRALQPFSVSVSWHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLCNL 629

Query: 224 GKETLDHLFFKCSFSKFI 277
             ET DHLFF C FS  I
Sbjct: 630 VDETRDHLFFACRFSSRI 647


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/66 (33%), Positives = 40/66 (60%)
 Frame = +2

Query: 80  WWSLIWFPQHIPKHSLLMWKVAIDKVSSMEKLFKLKIVDNEFCTLCWTGKETLDHLFFKC 259
           W S++WFP  IP+H+ L W+V + ++ + ++L +  I  +  C LC    E+  HLFF C
Sbjct: 428 WSSIVWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGC 487

Query: 260 SFSKFI 277
           +++  +
Sbjct: 488 TYASHL 493


>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 637

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 47  WRQLGTNPSKW-WWSLIWFPQHIPKHSLLMWKVAIDKVSSMEKLFKLKIVDNEFCTLCWT 223
           W+Q+ T  ++  W+  +WFP   PK+S + W    +++++ ++L+K        C  C  
Sbjct: 267 WQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDE 326

Query: 224 GKETLDHLFFKCSFSKFI 277
             ET DHLFF C +S  I
Sbjct: 327 ELETRDHLFFSCPYSSQI 344


>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
          Length = 278

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +2

Query: 47  WRQLGTNPSKW-WWSLIWFPQHIPKHSLLMWKVAIDKVSSMEKLFKLKIVDNEFCTLCWT 223
           W+Q+ T  ++  W+  +WFP   PK+S + W    +++++ ++L+K        C  C  
Sbjct: 99  WQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARATCVFCDE 158

Query: 224 GKETLDHLFFKCSFSKFI 277
             ET DHLFF C +S  I
Sbjct: 159 ELETRDHLFFSCPYSSQI 176