BLASTX nr result
ID: Sinomenium21_contig00048257
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00048257
(304 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containi... 76 4e-12
ref|XP_007045078.1| Pentatricopeptide repeat-containing protein,... 75 1e-11
ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsu... 71 2e-10
ref|XP_004956188.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare] 69 7e-10
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 9e-10
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
ref|NP_001147833.1| GTP binding protein [Zea mays] gi|195614010|... 69 9e-10
gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis] 68 1e-09
ref|XP_006837175.1| hypothetical protein AMTR_s00105p00044870 [A... 68 2e-09
gb|EMS49071.1| hypothetical protein TRIUR3_09168 [Triticum urartu] 68 2e-09
ref|XP_002531063.1| pentatricopeptide repeat-containing protein,... 68 2e-09
gb|EMT24513.1| hypothetical protein F775_06744 [Aegilops tauschii] 67 2e-09
emb|CBI26924.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [S... 67 2e-09
ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Popu... 66 4e-09
ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Caps... 66 4e-09
>ref|XP_004298459.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 515
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLA 151
+YFQ+ML +GIRPP L+SNLKQALLD G+ D IS GLK++K+RKTPLA
Sbjct: 463 RYFQDMLDMGIRPPTQLFSNLKQALLDDGRKDAVISFGLKIEKLRKTPLA 512
>ref|XP_007045078.1| Pentatricopeptide repeat-containing protein, putative isoform 1
[Theobroma cacao] gi|590696120|ref|XP_007045079.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709013|gb|EOY00910.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao] gi|508709014|gb|EOY00911.1|
Pentatricopeptide repeat-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 545
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
KYFQEML GIRPP ++SNLKQALLD GK D A++L K+DK+RK PL G
Sbjct: 492 KYFQEMLDAGIRPPAKMFSNLKQALLDEGKKDTALNLARKIDKLRKMPLVG 542
>ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Citrus sinensis]
Length = 537
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPL 148
KYFQEML +GIRPPG L+SNLKQAL D G + A+ L K+DK+RKTPL
Sbjct: 484 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 532
>gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 547
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAGG 157
KYFQEML GIRPP ++SNLKQALLD GK+D A++L K++K+R TPL G
Sbjct: 493 KYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALNLARKINKLRGTPLVVG 544
>ref|XP_004956188.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Setaria italica]
Length = 557
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
YFQEML GIRPPG L+SNLK+AL++GG+ +A + LKLD +RKTPL G
Sbjct: 508 YFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMALKLDALRKTPLRG 557
>ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
YFQEML GIRPPG L+SNLK+AL++GG+ +A + LKLD +RKTP G
Sbjct: 498 YFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALKLDTLRKTPFRG 547
>dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPL 148
YFQEML GIRPPG L+SNLK+AL++GG+ +A + LKLD++RKTP+
Sbjct: 516 YFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKTPM 563
>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
YFQEML +GIRPP +++SNLKQALLD G+ D A+ + K+ K+RK PL G
Sbjct: 493 YFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLRKAPLVG 542
>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
YFQEML +GIRPP +++SNLKQALLD G+ D A+ + K+ K+RK PL G
Sbjct: 493 YFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRKAPLVG 542
>ref|NP_001147833.1| GTP binding protein [Zea mays] gi|195614010|gb|ACG28835.1| GTP
binding protein [Zea mays] gi|413952711|gb|AFW85360.1|
GTP binding protein [Zea mays]
Length = 547
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
YFQEML GIRPPG L+SNLK+AL+ GG+ +A + LKLD IRKTP G
Sbjct: 498 YFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEVALKLDAIRKTPFRG 547
>gb|EXB65620.1| hypothetical protein L484_025886 [Morus notabilis]
Length = 551
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
KYFQEM+ +GIRPP LYSNLKQALLD G+ D+ +L +++K+RKT L G
Sbjct: 501 KYFQEMMDMGIRPPAQLYSNLKQALLDEGREDMVQTLYERIEKLRKTSLVG 551
>ref|XP_006837175.1| hypothetical protein AMTR_s00105p00044870 [Amborella trichopoda]
gi|548839772|gb|ERN00029.1| hypothetical protein
AMTR_s00105p00044870 [Amborella trichopoda]
Length = 522
Score = 67.8 bits (164), Expect = 2e-09
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
KYF EML +GIRPPG ++ LKQ LLD GK ++A+ L L+LD++R+ P +G
Sbjct: 470 KYFLEMLDMGIRPPGQMFGRLKQCLLDDGKKELALDLSLRLDRVRRIPFSG 520
>gb|EMS49071.1| hypothetical protein TRIUR3_09168 [Triticum urartu]
Length = 534
Score = 67.8 bits (164), Expect = 2e-09
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPL 148
YFQEML GIRPPG L+SNLK+AL++GG+ +A + LKLD +RKTP+
Sbjct: 485 YFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDGLRKTPM 532
>ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529358|gb|EEF31324.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTP 145
KYFQEML +GIRPP +L+S+LKQAL++ G+ D + L K+DK+RKTP
Sbjct: 483 KYFQEMLDVGIRPPAALFSHLKQALIEDGRKDTVVLLAQKIDKLRKTP 530
>gb|EMT24513.1| hypothetical protein F775_06744 [Aegilops tauschii]
Length = 539
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPL 148
YFQEML GIRPPG L+SNLK+AL++GG+ +A + LKLD +RKTP+
Sbjct: 490 YFQEMLDKGIRPPGQLFSNLKEALIEGGRVSLAQEMDLKLDGLRKTPM 537
>emb|CBI26924.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
KYF EML +GIRPP +++SNLKQ LLD GK D+ + L KLDKIR T + G
Sbjct: 165 KYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTTQVIG 215
>ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein
SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
YFQEML GIRPPG L+SNLK+AL++GG+ +A + KLD IRKTP G
Sbjct: 502 YFQEMLDKGIRPPGQLFSNLKEALVEGGRISLAQEMASKLDAIRKTPFRG 551
>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
KYF EML +GIRPP +++SNLKQ LLD GK D+ + L KLDKIR T + G
Sbjct: 481 KYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTTQVIG 531
>ref|XP_002315895.2| hypothetical protein POPTR_0010s12490g [Populus trichocarpa]
gi|550329653|gb|EEF02066.2| hypothetical protein
POPTR_0010s12490g [Populus trichocarpa]
Length = 488
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +2
Query: 5 YFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPL 148
YFQEML +GIRPP L+SNLKQ LLD GK D + KLDK+RK PL
Sbjct: 439 YFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRKAPL 486
>ref|XP_006301573.1| hypothetical protein CARUB_v10022011mg [Capsella rubella]
gi|482570283|gb|EOA34471.1| hypothetical protein
CARUB_v10022011mg [Capsella rubella]
Length = 512
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = +2
Query: 2 KYFQEMLSLGIRPPGSLYSNLKQALLDGGKSDVAISLGLKLDKIRKTPLAG 154
+YF EML +GIRPPG ++S LKQ LLD G+ D + L +K+D++RKT L G
Sbjct: 462 EYFNEMLDVGIRPPGQMFSRLKQTLLDEGRKDKVVELAVKMDRLRKTQLVG 512