BLASTX nr result
ID: Sinomenium21_contig00048197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00048197
(364 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHN13809.1| movement protein [Aristotelia chilensis vein clea... 64 9e-11
ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Popu... 52 3e-08
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr... 57 3e-08
ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutr... 57 1e-07
ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arab... 59 2e-07
ref|XP_006408745.1| hypothetical protein EUTSA_v10002304mg, part... 55 4e-07
ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arab... 55 6e-07
ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobrom... 50 8e-07
ref|XP_006405134.1| hypothetical protein EUTSA_v100007052mg, par... 54 1e-06
ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626... 45 1e-06
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 58 1e-06
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 58 1e-06
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 58 1e-06
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part... 56 1e-06
ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627... 47 1e-06
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part... 56 4e-06
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 44 5e-06
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 44 6e-06
ref|XP_006408742.1| hypothetical protein EUTSA_v10002187mg, part... 50 8e-06
>gb|AHN13809.1| movement protein [Aristotelia chilensis vein clearing virus]
Length = 820
Score = 63.5 bits (153), Expect(2) = 9e-11
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
GAV+++LTFHG + RIALLDSR L+YQH I T+++TLNAGT+F+
Sbjct: 143 GAVRLALTFHGRKGLPISSRIALLDSRFLEYQHACIGTIETTLNAGTVFV 192
Score = 28.5 bits (62), Expect(2) = 9e-11
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLH 161
+T+++P + QW +G+THLH
Sbjct: 120 VTLEIPSVYPSQWIAEGFTHLH 141
>ref|XP_002307276.1| hypothetical protein POPTR_0005s18370g [Populus trichocarpa]
gi|222856725|gb|EEE94272.1| hypothetical protein
POPTR_0005s18370g [Populus trichocarpa]
Length = 667
Score = 51.6 bits (122), Expect(2) = 3e-08
Identities = 21/50 (42%), Positives = 37/50 (74%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
GA++++L++HG + R+ALLD+R L+YQH I ++++TLN GT+ +
Sbjct: 134 GAIRLALSYHGQKGLPVAARLALLDTRYLEYQHACIGSLETTLNCGTVVV 183
Score = 32.0 bits (71), Expect(2) = 3e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLH 161
+T+++P L QW QGYTH+H
Sbjct: 111 VTLEIPSEFLGQWISQGYTHIH 132
>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
gi|557099163|gb|ESQ39527.1| hypothetical protein
EUTSA_v10001103mg [Eutrema salsugineum]
Length = 1135
Score = 56.6 bits (135), Expect(2) = 3e-08
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
G V+I LT H + L RIAL+DSR+ YQ I TVQ+TLNAGT+F+
Sbjct: 130 GVVRIGLTLHARKGLLVIARIALVDSRLKSYQQACIGTVQTTLNAGTVFV 179
Score = 26.6 bits (57), Expect(2) = 3e-08
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLH 161
+++ +P L W +QGYTHLH
Sbjct: 107 ISLNIPENLRRLWQQQGYTHLH 128
>ref|XP_006398032.1| hypothetical protein EUTSA_v10001266mg [Eutrema salsugineum]
gi|557099114|gb|ESQ39485.1| hypothetical protein
EUTSA_v10001266mg [Eutrema salsugineum]
Length = 492
Score = 57.0 bits (136), Expect(2) = 1e-07
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = -3
Query: 161 HGAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
+GA++++LT HG ++ R+ALLD+R +YQH I T+Q+TL+AGT+F+
Sbjct: 114 YGAIRLALTLHGRKDLPVVARVALLDTRYREYQHACIATIQTTLDAGTVFV 164
Score = 24.3 bits (51), Expect(2) = 1e-07
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 202 LLPQWCKQGYTHLH 161
++ QW GYTHLH
Sbjct: 100 MVHQWKTHGYTHLH 113
>ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arabidopsis lyrata subsp.
lyrata] gi|297336946|gb|EFH67363.1| hypothetical protein
ARALYDRAFT_336508 [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 59.3 bits (142), Expect(2) = 2e-07
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = -3
Query: 179 RLHPSSH---GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
R H +H GA++++LT HG + R+ALLD+R +YQH I T+Q+TLNAGT+F+
Sbjct: 52 RAHDYTHLHYGAIRLALTLHGRKGLHVVARVALLDTRYREYQHACIATIQTTLNAGTVFV 111
Score = 21.2 bits (43), Expect(2) = 2e-07
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1
Query: 193 QWCKQGYTHLH 161
QW YTHLH
Sbjct: 50 QWRAHDYTHLH 60
>ref|XP_006408745.1| hypothetical protein EUTSA_v10002304mg, partial [Eutrema
salsugineum] gi|557109901|gb|ESQ50198.1| hypothetical
protein EUTSA_v10002304mg, partial [Eutrema salsugineum]
Length = 194
Score = 55.5 bits (132), Expect(2) = 4e-07
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = -3
Query: 155 AVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
A++++L+ HG ++ L R+ALLD+R +YQH T+Q+TLNAGTIF+
Sbjct: 116 AIRLALSLHGRKSLLGVARVALLDTRYKEYQHACKATIQTTLNAGTIFV 164
Score = 24.3 bits (51), Expect(2) = 4e-07
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 202 LLPQWCKQGYTHLH 161
++ QW GYTHLH
Sbjct: 100 MVHQWKTHGYTHLH 113
>ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arabidopsis lyrata subsp.
lyrata] gi|297339666|gb|EFH70083.1| hypothetical protein
ARALYDRAFT_891051 [Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 54.7 bits (130), Expect(2) = 6e-07
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = -3
Query: 161 HGAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
+GA++++LT +G + R+ALLD+R +YQH I T+Q+TLNA TIF+
Sbjct: 117 YGAIRVALTLYGRKGLPIVVRVALLDTRYREYQHTYIATIQTTLNASTIFV 167
Score = 24.3 bits (51), Expect(2) = 6e-07
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 202 LLPQWCKQGYTHLH 161
++ QW GYTHLH
Sbjct: 103 MIHQWRAYGYTHLH 116
>ref|XP_007036219.1| Uncharacterized protein TCM_012065 [Theobroma cacao]
gi|508773464|gb|EOY20720.1| Uncharacterized protein
TCM_012065 [Theobroma cacao]
Length = 280
Score = 50.4 bits (119), Expect(2) = 8e-07
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = -3
Query: 173 HPSSH---GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
H SH GAV+++L +HG + +ALLDSR +KY+H I TV+ TLN T+ +
Sbjct: 118 HGYSHIHFGAVRLALNYHGREGQSVVAHMALLDSRYIKYEHACIGTVEDTLNTKTLIV 175
Score = 28.1 bits (61), Expect(2) = 8e-07
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLH 161
+T+++PL QW GY+H+H
Sbjct: 103 VTLQIPLEFPQQWIHHGYSHIH 124
>ref|XP_006405134.1| hypothetical protein EUTSA_v100007052mg, partial [Eutrema
salsugineum] gi|557106262|gb|ESQ46587.1| hypothetical
protein EUTSA_v100007052mg, partial [Eutrema
salsugineum]
Length = 543
Score = 53.5 bits (127), Expect(2) = 1e-06
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
G V+I LT H + RIAL+DSR+ YQ I TVQ+TLNAGT+F+
Sbjct: 13 GVVRIGLTLHARKGLPVVARIALVDSRLKSYQQACIGTVQTTLNAGTVFV 62
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 190 WCKQGYTHLH 161
W +QGYTHLH
Sbjct: 2 WQQQGYTHLH 11
>ref|XP_006494615.1| PREDICTED: uncharacterized protein LOC102626000 [Citrus sinensis]
Length = 449
Score = 44.7 bits (104), Expect(2) = 1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
G V++ LT HG + +ALLD+R +YQH VI TV +TL+AG +
Sbjct: 383 GGVRLILTLHGRKGLPVTASLALLDTRFKEYQHAVIGTVLTTLHAGNALL 432
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLHM 158
+T+++P L+ QW ++GYTHLH+
Sbjct: 360 VTLEIPTDLIAQWQREGYTHLHL 382
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
GAVKI+LT+HG + R+ALLD+R L+YQH + T + TLNAGT+FI
Sbjct: 129 GAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFI 178
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
GAVKI+LT+HG + R+ALLD+R L+YQH + T + TLNAGT+FI
Sbjct: 129 GAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFI 178
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/50 (56%), Positives = 37/50 (74%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
GAVKI+LT+HG + R+ALLD+R L+YQH + T + TLNAGT+FI
Sbjct: 128 GAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFI 177
>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema
salsugineum] gi|557104186|gb|ESQ44532.1| hypothetical
protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
Length = 751
Score = 55.8 bits (133), Expect(2) = 1e-06
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -3
Query: 161 HGAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFIKK 3
+GA+ ++LT HG + R+ALLD+R +YQH + T+Q+TLNAGT FI K
Sbjct: 15 YGAIWLALTLHGRKGLPIVARVALLDTRYREYQHACVATIQTTLNAGTSFIYK 67
Score = 21.9 bits (45), Expect(2) = 1e-06
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 202 LLPQWCKQGYTHLH 161
++ QW GYTH H
Sbjct: 1 MVHQWKTHGYTHQH 14
>ref|XP_006478657.1| PREDICTED: uncharacterized protein LOC102627366 [Citrus sinensis]
Length = 345
Score = 46.6 bits (109), Expect(2) = 1e-06
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
G V++ T HG + R+ALLD+R +YQH VI TV +TL+AG++ +
Sbjct: 142 GGVRLIRTLHGRKRLPVTARLALLDTRFKEYQHAVIGTVLTTLHAGSVLL 191
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLHM 158
+T+++P L+ W ++GYTHLH+
Sbjct: 119 VTLEIPTDLVSHWKREGYTHLHL 141
>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema
salsugineum] gi|557090298|gb|ESQ31006.1| hypothetical
protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
Length = 1904
Score = 55.8 bits (133), Expect(2) = 4e-06
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = -3
Query: 161 HGAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
+GA++++LT H + R+ALLD+R +YQH I T+Q+T+NAGTIF+
Sbjct: 84 YGAIRLALTLHARKGLPVVARVALLDTRYREYQHACIATIQTTMNAGTIFV 134
Score = 20.4 bits (41), Expect(2) = 4e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 235 PSPMTIKLPLLLLPQWCKQGYTHLH 161
P+ T ++ L + GYTHLH
Sbjct: 59 PATETEQMIPLCFNEGMTHGYTHLH 83
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 44.3 bits (103), Expect(2) = 5e-06
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
G +++ LT HG + R+A+LD+R +YQ VI TV +TL+AG++ +
Sbjct: 129 GGIRLILTLHGRKGLPVTARLAMLDTRFKQYQDAVIGTVLTTLHAGSVLL 178
Score = 31.6 bits (70), Expect(2) = 5e-06
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLHM 158
+T+++P L+ W ++GYTHLH+
Sbjct: 106 VTLEIPSELISNWKREGYTHLHL 128
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 43.9 bits (102), Expect(2) = 6e-06
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = -3
Query: 158 GAVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
G +++ LT HG + R+ALLD+R ++Q VI TV +TL+AG++ +
Sbjct: 129 GGIRLILTLHGRKGLPVTARVALLDTRFKQFQDAVIGTVLTTLHAGSVLL 178
Score = 31.6 bits (70), Expect(2) = 6e-06
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = -1
Query: 226 MTIKLPLLLLPQWCKQGYTHLHM 158
+T+++P L+ W ++GYTHLH+
Sbjct: 106 VTLEIPSELISNWKREGYTHLHL 128
>ref|XP_006408742.1| hypothetical protein EUTSA_v10002187mg, partial [Eutrema
salsugineum] gi|557109898|gb|ESQ50195.1| hypothetical
protein EUTSA_v10002187mg, partial [Eutrema salsugineum]
Length = 341
Score = 50.4 bits (119), Expect(2) = 8e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = -3
Query: 155 AVKISLTFHGHQNCLSF*RIALLDSRMLKYQHVVIDTVQSTLNAGTIFI 9
A++++LT HG + R+A+LD+R +YQ I T+Q+ LNAGTIF+
Sbjct: 113 AIRLALTLHGRKGLPVVARVAILDTRYKEYQRACISTIQTILNAGTIFV 161
Score = 24.6 bits (52), Expect(2) = 8e-06
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 202 LLPQWCKQGYTHLH 161
++ QW GYTHLH
Sbjct: 97 MVHQWKNHGYTHLH 110