BLASTX nr result
ID: Sinomenium21_contig00047784
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00047784 (416 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE93234.1| coat protein [Cycas necrotic stunt virus] 252 4e-65 ref|NP_733975.1| capsid protein [Cycas necrotic stunt virus] 247 1e-63 ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus] gi|1... 247 1e-63 gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus] 244 7e-63 gb|AHC03345.1| coat protein, partial [Tomato black ring virus] 87 3e-15 gb|AHC03348.1| coat protein, partial [Tomato black ring virus] 85 1e-14 emb|CAA56792.1| P2 [Tomato black ring virus] 83 3e-14 gb|AHC03351.1| coat protein, partial [Tomato black ring virus] 83 3e-14 gb|AHC03352.1| coat protein, partial [Tomato black ring virus] 82 1e-13 gb|AHC03346.1| coat protein, partial [Tomato black ring virus] 82 1e-13 ref|NP_758856.1| coat protein [Tomato black ring virus] 82 1e-13 ref|NP_758518.1| polyprotein [Tomato black ring virus] gi|252473... 82 1e-13 gb|AHC03347.1| coat protein, partial [Tomato black ring virus] 81 1e-13 gb|AHC03349.1| coat protein, partial [Tomato black ring virus] 81 2e-13 gb|AHC03350.1| coat protein, partial [Tomato black ring virus] 80 2e-13 ref|NP_734052.1| coat protein [grapevine chrome mosaic virus] 77 2e-12 gb|AAB22205.1| coat protein [nepovirus grapevine chrome mosaic v... 77 2e-12 ref|NP_619704.1| polyprotein [Grapevine chrome mosaic virus] gi|... 77 2e-12 emb|CAA60707.1| ORF [Artichoke italian latent virus] 75 1e-11 ref|NP_733980.1| capsid protein [Beet ringspot virus] 73 5e-11 >dbj|BAE93234.1| coat protein [Cycas necrotic stunt virus] Length = 569 Score = 252 bits (643), Expect = 4e-65 Identities = 121/138 (87%), Positives = 122/138 (88%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 235 P+SPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH Sbjct: 322 PMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 381 Query: 234 LESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFGPE 55 LESEDMKVT YTNAFLQMCQTSTMHFGSVIIHFSWTLF AEGFGPE Sbjct: 382 LESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPE 441 Query: 54 EENFRGHCRNFSIYEGKA 1 EENFRGHCRNFSIYEGKA Sbjct: 442 EENFRGHCRNFSIYEGKA 459 >ref|NP_733975.1| capsid protein [Cycas necrotic stunt virus] Length = 564 Score = 247 bits (630), Expect = 1e-63 Identities = 117/138 (84%), Positives = 121/138 (87%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 235 P+SPNAIKAPFDM+FKI+GFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH Sbjct: 310 PMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 369 Query: 234 LESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFGPE 55 LESEDMKVT YTNAFLQMCQTSTMHFGSVIIHFSWTLF AEGFGPE Sbjct: 370 LESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPE 429 Query: 54 EENFRGHCRNFSIYEGKA 1 EENFRGHCRN SIYEG+A Sbjct: 430 EENFRGHCRNLSIYEGRA 447 >ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus] gi|124106315|sp|Q8QVU9.2|POL2_CNSV RecName: Full=RNA2 polyprotein; AltName: Full=P2; Contains: RecName: Full=Protein 2A; Short=P2A; Contains: RecName: Full=Movement protein; AltName: Full=2B-MP; Contains: RecName: Full=Coat protein; AltName: Full=2C-CP gi|84369993|dbj|BAB89370.2| polyprotien 2 [Cycas necrotic stunt virus] Length = 1240 Score = 247 bits (630), Expect = 1e-63 Identities = 117/138 (84%), Positives = 121/138 (87%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 235 P+SPNAIKAPFDM+FKI+GFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH Sbjct: 993 PMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 1052 Query: 234 LESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFGPE 55 LESEDMKVT YTNAFLQMCQTSTMHFGSVIIHFSWTLF AEGFGPE Sbjct: 1053 LESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPE 1112 Query: 54 EENFRGHCRNFSIYEGKA 1 EENFRGHCRN SIYEG+A Sbjct: 1113 EENFRGHCRNLSIYEGRA 1130 >gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus] Length = 1289 Score = 244 bits (624), Expect = 7e-63 Identities = 115/138 (83%), Positives = 121/138 (87%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNH 235 P+SPNAIKAPFDM+FKI+GF+PDAPMCRTINFTQRFGWFAVEPT +TGAIKLKIWPVSNH Sbjct: 1042 PMSPNAIKAPFDMIFKIRGFSPDAPMCRTINFTQRFGWFAVEPTATTGAIKLKIWPVSNH 1101 Query: 234 LESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFGPE 55 LES+DMKVT YTNAFLQMCQTSTMHFGSVIIHFSWTLF AEGFGPE Sbjct: 1102 LESDDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPE 1161 Query: 54 EENFRGHCRNFSIYEGKA 1 EENFRGHCRNFSIYEGKA Sbjct: 1162 EENFRGHCRNFSIYEGKA 1179 >gb|AHC03345.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 86.7 bits (213), Expect = 3e-15 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 3/134 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TGA+ LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFG 61 +L S+++++T + NA MC T+ MHFG +HFSW+ F G Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWSWFRGKLADQSGVFSVQTGMGKS 429 Query: 60 PEEENFRG-HCRNF 22 E+F G HC N+ Sbjct: 430 TVAEHFGGRHCFNY 443 >gb|AHC03348.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 84.7 bits (208), Expect = 1e-14 Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 3/134 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TGA+ LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFG 61 +L S+++++T + NA MC T+ MHFG +HFSW+ F G Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWSWFRGKLADQSGVFSVQTGMGKS 429 Query: 60 PEEENFRG-HCRNF 22 E+F G HC ++ Sbjct: 430 TVAEHFGGRHCFSY 443 >emb|CAA56792.1| P2 [Tomato black ring virus] Length = 1344 Score = 83.2 bits (204), Expect = 3e-14 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 2/97 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TGA+ LKI Sbjct: 1143 PLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARM 1202 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSW 130 +L S++++VT + NA MC T+ MHFG +HFSW Sbjct: 1203 ANLTSKEVQVTNFVNALAIMCATTGMHFGKCTLHFSW 1239 >gb|AHC03351.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 83.2 bits (204), Expect = 3e-14 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR +N+ Q F WF +E T +TGA+ LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREVNYNQHFAWFMLEHLDTNTTGAVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLFXXXXXXXXXXXXXXXAEGFG 61 +L S+++++T + NA MC T+ MHFG +HFSW+ + G Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWSWYRGKLADQSGVVSVQTGMGKS 429 Query: 60 PEEENFRG-HCRNF 22 E+F G HC ++ Sbjct: 430 TVAEHFGGRHCFSY 443 >gb|AHC03352.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 81.6 bits (200), Expect = 1e-13 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TG + LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 +L S+++++T + NA MC T+ MHFG +HFSW+ F Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWSWF 409 >gb|AHC03346.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 81.6 bits (200), Expect = 1e-13 Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TG + LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 +L S+++++T + NA MC T+ MHFG +HFSW+ F Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWSWF 409 >ref|NP_758856.1| coat protein [Tomato black ring virus] Length = 511 Score = 81.6 bits (200), Expect = 1e-13 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TG + LKI Sbjct: 310 PLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 +L S+++++T + NA MC T+ MHFG +HFSW F Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWNWF 409 >ref|NP_758518.1| polyprotein [Tomato black ring virus] gi|25247364|gb|AAN72831.1| polyprotein [Tomato black ring virus] Length = 1343 Score = 81.6 bits (200), Expect = 1e-13 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR IN+ Q F WF +E T +TG + LKI Sbjct: 1142 PLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARM 1201 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 +L S+++++T + NA MC T+ MHFG +HFSW F Sbjct: 1202 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWNWF 1241 >gb|AHC03347.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 81.3 bits (199), Expect = 1e-13 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR +N+ Q F WF +E T +TG + LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREVNYNQHFAWFMLEHLDTNTTGMVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 +L S+++++T + NA MC T+ MHFG +HFSW+ F Sbjct: 370 ANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWSWF 409 >gb|AHC03349.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 80.9 bits (198), Expect = 2e-13 Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR +N+ Q F WF +E T +TG + LK+ Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREVNYNQHFAWFMLEHLDTNTTGMVSLKLPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 +L S+++++T + NA MC T+ MHFG +HFSW+ F Sbjct: 370 ANLTSKEVQITNFVNALAVMCATTGMHFGKCTLHFSWSWF 409 >gb|AHC03350.1| coat protein, partial [Tomato black ring virus] Length = 511 Score = 80.5 bits (197), Expect = 2e-13 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVE--PTTSTGAIKLKIWPVS 241 P++P ++ F I G A +CR +N+ Q F WF +E T +TG + LKI Sbjct: 310 PLAPETMETGFQYYIHIHGVKVKANLCREVNYNQHFAWFMLEHLDTNTTGMVSLKIPARM 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTLF 121 ++ S++++VT + NA MC T+ MHFG +HFSW+ F Sbjct: 370 ANVTSKEVQVTNFVNALAIMCATTGMHFGKCTLHFSWSWF 409 >ref|NP_734052.1| coat protein [grapevine chrome mosaic virus] Length = 514 Score = 77.0 bits (188), Expect = 2e-12 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAV----EPTTSTGAIKLKIWP 247 P++P +++ + +I G D PMCR IN+ QRF WF + +P S +KL + Sbjct: 311 PMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSK-ILKLTLPS 369 Query: 246 VSNHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTL 124 ++ ++ VT Y NAF MC T+ MH G I+HFSWTL Sbjct: 370 RVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTL 410 >gb|AAB22205.1| coat protein [nepovirus grapevine chrome mosaic virus GCMV, Peptide, 512 aa] Length = 512 Score = 77.0 bits (188), Expect = 2e-12 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAV----EPTTSTGAIKLKIWP 247 P++P +++ + +I G D PMCR IN+ QRF WF + +P S +KL + Sbjct: 309 PMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSK-ILKLTLPS 367 Query: 246 VSNHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTL 124 ++ ++ VT Y NAF MC T+ MH G I+HFSWTL Sbjct: 368 RVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTL 408 >ref|NP_619704.1| polyprotein [Grapevine chrome mosaic virus] gi|130399|sp|P13026.1|POL2_GCMV RecName: Full=RNA2 polyprotein; AltName: Full=P2; Contains: RecName: Full=Protein 2A; Short=P2A; Contains: RecName: Full=Movement protein; AltName: Full=2B-MP; Contains: RecName: Full=Coat protein; AltName: Full=2C-CP gi|59348|emb|CAA33255.1| unnamed protein product [Grapevine chrome mosaic virus] Length = 1324 Score = 77.0 bits (188), Expect = 2e-12 Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 4/101 (3%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAV----EPTTSTGAIKLKIWP 247 P++P +++ + +I G D PMCR IN+ QRF WF + +P S +KL + Sbjct: 1121 PMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSK-ILKLTLPS 1179 Query: 246 VSNHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWTL 124 ++ ++ VT Y NAF MC T+ MH G I+HFSWTL Sbjct: 1180 RVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTL 1220 >emb|CAA60707.1| ORF [Artichoke italian latent virus] Length = 510 Score = 74.7 bits (182), Expect = 1e-11 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPT-TSTGAIKLKIWPVSN 238 P +P ++ F+ +I G +CR IN+ QRFGWF + P+ +T + KI Sbjct: 309 PRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIG 368 Query: 237 HLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSWT 127 ++ ++ K +TNAF MC T+ MH+G I+HF+W+ Sbjct: 369 NIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFTWS 405 >ref|NP_733980.1| capsid protein [Beet ringspot virus] Length = 520 Score = 72.8 bits (177), Expect = 5e-11 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 2/97 (2%) Frame = -3 Query: 414 PISPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGA--IKLKIWPVS 241 P++P ++ + +IKG + +CR IN+ QRF W +E ++ A IK+KI Sbjct: 310 PMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRI 369 Query: 240 NHLESEDMKVTEYTNAFLQMCQTSTMHFGSVIIHFSW 130 +L S+ +KVT + NA +C T+ MH G+ IHFSW Sbjct: 370 GNLSSKHVKVTNFVNALAILCATTGMHHGNCTIHFSW 406