BLASTX nr result
ID: Sinomenium21_contig00047744
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium21_contig00047744 (278 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 100 3e-19 gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 92 1e-16 gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 92 1e-16 ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 90 4e-16 ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 90 4e-16 ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 89 5e-16 emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 89 8e-16 ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 88 1e-15 gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali... 87 2e-15 ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha... 87 2e-15 ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 87 2e-15 ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 86 4e-15 ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 86 5e-15 ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A... 85 9e-15 emb|CBI26820.3| unnamed protein product [Vitis vinifera] 85 1e-14 ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 85 1e-14 ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 84 2e-14 ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 83 3e-14 emb|CBI26821.3| unnamed protein product [Vitis vinifera] 82 6e-14 ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 82 6e-14 >gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] Length = 1133 Score = 100 bits (248), Expect = 3e-19 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+Q+SGFPS VSA+ VKEFLEG+TG GTVYA+KIR K R++A+VQF T + E Sbjct: 1 MGKTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAE 60 Query: 204 EISLIK----YYGRSYLTVRQMKRDIVPK 278 I + +YGRSYL R M+RDIVPK Sbjct: 61 LIIRLANPRLWYGRSYLLARVMERDIVPK 89 >gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] Length = 1110 Score = 91.7 bits (226), Expect = 1e-16 Identities = 54/89 (60%), Positives = 60/89 (67%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAK--- 194 M KT+QV GF S VSA VK FLEGYTG TVYALKIRQ K S RAFA+VQFT + Sbjct: 1 MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG-RAFAIVQFTRSSDAG 59 Query: 195 -CIEEISLIKYYGRSYLTVRQMKRDIVPK 278 I + YYGRSYL R+M+ DIVPK Sbjct: 60 LIIRLANQRLYYGRSYLKAREMETDIVPK 88 >gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] Length = 1110 Score = 91.7 bits (226), Expect = 1e-16 Identities = 54/89 (60%), Positives = 60/89 (67%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAK--- 194 M KT+QV GF S VSA VK FLEGYTG TVYALKIRQ K S RAFA+VQFT + Sbjct: 1 MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG-RAFAIVQFTRSSDAG 59 Query: 195 -CIEEISLIKYYGRSYLTVRQMKRDIVPK 278 I + YYGRSYL R+M+ DIVPK Sbjct: 60 LIIRLANQRLYYGRSYLKAREMETDIVPK 88 >ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] Length = 1097 Score = 89.7 bits (221), Expect = 4e-16 Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 5/90 (5%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV GFP+ VSA+ VK+FLE TG GTVYA+K+RQ K R FA+VQFT + Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVFAIVQFTNERYAR 60 Query: 204 EI-----SLIKYYGRSYLTVRQMKRDIVPK 278 +I YYGRSYL ++++DIVPK Sbjct: 61 QIITGAAERSLYYGRSYLNAFEVEQDIVPK 90 >ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa] gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa] Length = 1133 Score = 89.7 bits (221), Expect = 4e-16 Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 MSKTV+VSGFPSS +A V+ FLE +TG GTV ALKIR+ + R +A+VQFTT + E Sbjct: 1 MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAE 60 Query: 204 EISLIK----YYGRSYLTVRQMKRDIVPK 278 +I + +YG SYL R M RDI+P+ Sbjct: 61 QIISLANPRLWYGHSYLNARPMDRDIIPQ 89 >ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|590697846|ref|XP_007045553.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|590697850|ref|XP_007045554.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao] Length = 1109 Score = 89.4 bits (220), Expect = 5e-16 Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QVS FPS+V A+ VK FLE YTG+ TVYALKIRQ+K RA+A+VQFT + E Sbjct: 1 MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGG-RAYAIVQFTKSTDAE 59 Query: 204 EISLIK----YYGRSYLTVRQMKRDIVPK 278 I + YYG SYL R+M+ DIVPK Sbjct: 60 LIIRLTNQRLYYGSSYLKAREMENDIVPK 88 >emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri] Length = 1107 Score = 88.6 bits (218), Expect = 8e-16 Identities = 47/90 (52%), Positives = 59/90 (65%), Gaps = 5/90 (5%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV GFP+ VSA+ VK+FLE TG GTVYA+K+RQ K R FA+VQFT + Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVFAIVQFTNERYAR 60 Query: 204 EI-----SLIKYYGRSYLTVRQMKRDIVPK 278 +I YYGRSYL ++ +DIVPK Sbjct: 61 QIITGAAERRLYYGRSYLNAFEVDQDIVPK 90 >ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine max] gi|571439308|ref|XP_006574822.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Glycine max] gi|571439310|ref|XP_006574823.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X3 [Glycine max] Length = 1125 Score = 87.8 bits (216), Expect = 1e-15 Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 7/92 (7%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKC-- 197 M KT+++ GFP+SV+ VK F+E YTGEGTV+A+K+R KG RAFA++QFTTA Sbjct: 1 MGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTTANSAT 60 Query: 198 -----IEEISLIKYYGRSYLTVRQMKRDIVPK 278 I YG SYL R+M+RDIVP+ Sbjct: 61 SMMSRANNILRTLRYGTSYLKAREMERDIVPR 92 >gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana] Length = 1107 Score = 87.4 bits (215), Expect = 2e-15 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFT----TA 191 M KT+QV GFP+ VSA+ VK+FLE TG GTVYA+K+RQ K R +A+VQFT T Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60 Query: 192 KCIEEISLIKYYGRSYLTVRQMKRDIVPK 278 I + YYGRSYL ++++DIVPK Sbjct: 61 LIITAAAERLYYGRSYLKAFEVEQDIVPK 89 >ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana] gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName: Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1; AltName: Full=RNA-directed RNA polymerase 1 gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19 [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1| putative RNA-directed RNA polymerase [Arabidopsis thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana] Length = 1107 Score = 87.4 bits (215), Expect = 2e-15 Identities = 47/89 (52%), Positives = 60/89 (67%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFT----TA 191 M KT+QV GFP+ VSA+ VK+FLE TG GTVYA+K+RQ K R +A+VQFT T Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60 Query: 192 KCIEEISLIKYYGRSYLTVRQMKRDIVPK 278 I + YYGRSYL ++++DIVPK Sbjct: 61 LIITAAAERLYYGRSYLKAFEVEQDIVPK 89 >ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata] Length = 1107 Score = 87.4 bits (215), Expect = 2e-15 Identities = 47/90 (52%), Positives = 59/90 (65%), Gaps = 5/90 (5%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV GFP+ VSA+ VK+FLE TG GTVYA+K+RQ K R FA+VQFT Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVFAIVQFTNEIYAR 60 Query: 204 EI-----SLIKYYGRSYLTVRQMKRDIVPK 278 +I YYGRSYL ++++DIVPK Sbjct: 61 QIITGAAERRLYYGRSYLNAFEVEQDIVPK 90 >ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis] Length = 1132 Score = 86.3 bits (212), Expect = 4e-15 Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 6/91 (6%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV GFP+ V+A+ VK+FLE TG GTVYALK+R K R +A+VQFTT + + Sbjct: 1 MGKTIQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAAD 60 Query: 204 EISLIK------YYGRSYLTVRQMKRDIVPK 278 I + +YGRSYL R+M++D VP+ Sbjct: 61 TIISLACRTEKLWYGRSYLNARRMEQDTVPR 91 >ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus] gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase 1a [Cucumis sativus] Length = 1130 Score = 85.9 bits (211), Expect = 5e-15 Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+ +SGFPS V+A VK FLEG+TG GTVYA+K+R K R +A+VQFT+A E Sbjct: 1 MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60 Query: 204 EISLIK----YYGRSYLTVRQMKRDIVPK 278 I + +YG SYL R + DIVPK Sbjct: 61 LIISLANQRLWYGSSYLKARATEVDIVPK 89 >ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda] gi|548853371|gb|ERN11375.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda] Length = 1210 Score = 85.1 bits (209), Expect = 9e-15 Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 7/92 (7%) Frame = +3 Query: 21 EMSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGS-NLRAFAVVQFTTAKC 197 E +TVQVSGFP A+ VK+FLE TG GTVY LKIR K N R FA+VQFTT+K Sbjct: 73 EGGRTVQVSGFPQGTCAEAVKKFLESITGFGTVYHLKIRIHKSKPNSRVFAIVQFTTSKS 132 Query: 198 IEEISLIK------YYGRSYLTVRQMKRDIVP 275 E I + Y+G SY+ VR M+ DIVP Sbjct: 133 AEVIYSLAPQPKSLYFGNSYVIVRYMENDIVP 164 >emb|CBI26820.3| unnamed protein product [Vitis vinifera] Length = 919 Score = 84.7 bits (208), Expect = 1e-14 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 MSKT+QV GFPS VSA +KEFLE YTGEGT+ AL+I+Q + A VQFT+ + E Sbjct: 1 MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60 Query: 204 -EISLIK---YYGRSYLTVRQMKRDIVPK 278 I+L K +YGR+YL R+M DI+PK Sbjct: 61 FIITLCKKKVWYGRNYLKAREMDLDIIPK 89 >ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera] Length = 1121 Score = 84.7 bits (208), Expect = 1e-14 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 MSKT+QV GFPS VSA +KEFLE YTGEGT+ AL+I+Q + A VQFT+ + E Sbjct: 1 MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60 Query: 204 -EISLIK---YYGRSYLTVRQMKRDIVPK 278 I+L K +YGR+YL R+M DI+PK Sbjct: 61 FIITLCKKKVWYGRNYLKAREMDLDIIPK 89 >ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella] gi|482575337|gb|EOA39524.1| hypothetical protein CARUB_v10008144mg [Capsella rubella] Length = 1107 Score = 84.0 bits (206), Expect = 2e-14 Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV GFP V+ VK FLE TG GTVYA+K+RQ K R FA+VQFT+ + Sbjct: 1 MGKTIQVFGFPVGVNTDDVKIFLERLTGSGTVYAIKVRQPKRGGPRVFAIVQFTSERHAR 60 Query: 204 EISLIK----YYGRSYLTVRQMKRDIVPK 278 I + YYGRSYL +M++DIVPK Sbjct: 61 LIITMAAERLYYGRSYLKAFEMEQDIVPK 89 >ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum] gi|557094740|gb|ESQ35322.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum] Length = 1108 Score = 83.2 bits (204), Expect = 3e-14 Identities = 44/89 (49%), Positives = 56/89 (62%), Gaps = 4/89 (4%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAK--- 194 M KT++V GFP VS + VK FLE TG GTVYA+K+RQ K R +A+VQFT + Sbjct: 1 MGKTIRVFGFPGGVSGEEVKNFLERETGSGTVYAIKVRQPKKGGPRVYAIVQFTNERHAR 60 Query: 195 -CIEEISLIKYYGRSYLTVRQMKRDIVPK 278 I YYGRSYL ++++DIVPK Sbjct: 61 WIITRAEEGLYYGRSYLKASEVEQDIVPK 89 >emb|CBI26821.3| unnamed protein product [Vitis vinifera] Length = 943 Score = 82.4 bits (202), Expect = 6e-14 Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 3/88 (3%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV G PS+VSA +KEFLE YTGEGT+ AL+I+Q K A VQFT+ + E Sbjct: 1 MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60 Query: 204 -EISLIK--YYGRSYLTVRQMKRDIVPK 278 ISL K +YG +YL R+M DI+PK Sbjct: 61 LIISLAKQLWYGGNYLKAREMDLDIIPK 88 >ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera] Length = 1109 Score = 82.4 bits (202), Expect = 6e-14 Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 3/88 (3%) Frame = +3 Query: 24 MSKTVQVSGFPSSVSAKVVKEFLEGYTGEGTVYALKIRQRKGSNLRAFAVVQFTTAKCIE 203 M KT+QV G PS+VSA +KEFLE YTGEGT+ AL+I+Q K A VQFT+ + E Sbjct: 1 MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60 Query: 204 -EISLIK--YYGRSYLTVRQMKRDIVPK 278 ISL K +YG +YL R+M DI+PK Sbjct: 61 LIISLAKQLWYGGNYLKAREMDLDIIPK 88