BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00047333
         (346 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containi...   158   8e-37
ref|XP_006468335.1| PREDICTED: pentatricopeptide repeat-containi...   157   2e-36
ref|XP_006448870.1| hypothetical protein CICLE_v10017884mg, part...   156   2e-36
ref|XP_002523172.1| pentatricopeptide repeat-containing protein,...   149   5e-34
ref|XP_002299041.1| hypothetical protein POPTR_0001s46850g [Popu...   147   1e-33
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_002314110.1| pentatricopeptide repeat-containing family p...   123   3e-26
ref|XP_006306144.1| hypothetical protein CARUB_v10011638mg [Caps...   122   5e-26
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   122   5e-26
ref|XP_002301860.2| pentatricopeptide repeat-containing family p...   122   7e-26
ref|XP_004491724.1| PREDICTED: pentatricopeptide repeat-containi...   122   7e-26
emb|CBI19452.3| unnamed protein product [Vitis vinifera]              122   7e-26
ref|XP_004511192.1| PREDICTED: pentatricopeptide repeat-containi...   121   9e-26
ref|XP_002532374.1| basic helix-loop-helix-containing protein, p...   121   1e-25
ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arab...   120   2e-25
ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containi...   120   3e-25
sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-c...   119   3e-25
ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thali...   119   3e-25
dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]           119   3e-25

>ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 553

 Score =  158 bits (399), Expect = 8e-37
 Identities = 74/114 (64%), Positives = 94/114 (82%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR  HRFI Q N   D+F+ T+LI+MY+KCGSLE+A+VTFYKM+ +DVF WT  I GLA+
Sbjct: 325 GRLAHRFIIQNNPRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSRDVFTWTTAIEGLAN 384

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFYK 2
           +GHG +AL LF +ME +GIKPN+ATF++VLMACS SGLV+EGCLLF RMV+ Y+
Sbjct: 385 HGHGDKALSLFTEMEKQGIKPNQATFVSVLMACSRSGLVKEGCLLFKRMVEAYQ 438



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/89 (38%), Positives = 50/89 (56%)
 Frame = -1

Query: 298 DVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKME 119
           DV   T L N Y   GS++ A   F +M  KD+ +W ++I       H K+A+ LF KME
Sbjct: 239 DVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNSMIHAYVKAKHPKKAIELFRKME 298

Query: 118 LEGIKPNEATFLAVLMACSHSGLVQEGCL 32
            E ++P+E T ++VL AC+    +Q G L
Sbjct: 299 NEMVEPDETTMVSVLAACASLADLQNGRL 327


>ref|XP_006468335.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Citrus sinensis]
          Length = 559

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/114 (65%), Positives = 90/114 (78%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR +HRFI Q NIT D F+ T+LI+MYSKCGSLE+ALVTFYK +CKDV  WT +I GLA+
Sbjct: 330 GRLVHRFILQNNITQDAFVKTALIDMYSKCGSLEEALVTFYKTDCKDVVTWTTMIEGLAN 389

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFYK 2
           YG G EAL +F +ME +GIKPNEATF++VL AC HSGL+ EGC LF RM   Y+
Sbjct: 390 YGLGNEALRVFYQMERKGIKPNEATFVSVLAACRHSGLITEGCQLFRRMGGVYR 443



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 27/95 (28%), Positives = 53/95 (55%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           +G+ +H  + +  +  D+++  SLI+ Y +     DA V F KM  +DV +W  +++   
Sbjct: 95  MGKGLHAHVTKTALDSDIYVGNSLIHFYGRMALFTDARVLFDKMPFRDVGSWNTLMSIYN 154

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACS 62
           D+    E L+LF+++  EGI  ++ T + +  AC+
Sbjct: 155 DFSDSGEVLILFKQLIFEGIVADKITLVILFSACA 189


>ref|XP_006448870.1| hypothetical protein CICLE_v10017884mg, partial [Citrus clementina]
           gi|557551481|gb|ESR62110.1| hypothetical protein
           CICLE_v10017884mg, partial [Citrus clementina]
          Length = 551

 Score =  156 bits (395), Expect = 2e-36
 Identities = 75/114 (65%), Positives = 90/114 (78%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR +HRFI Q NIT D F+ T+LI+MYSKCGSLE+ALVTFYK +CKDV  WT +I GLA+
Sbjct: 330 GRLVHRFILQNNITQDAFVKTALIDMYSKCGSLEEALVTFYKTDCKDVVTWTTMIEGLAN 389

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFYK 2
           YG G EAL +F +ME +GIKPNEATF++VL AC HSGL+ EGC LF RM   Y+
Sbjct: 390 YGLGNEALHVFFQMERKGIKPNEATFVSVLAACRHSGLITEGCQLFRRMGGVYR 443



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/95 (28%), Positives = 53/95 (55%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           +G+ +H  + +  +  D+++  SLI+ Y +     DA V F KM  +DV +W  +++   
Sbjct: 95  MGKGLHAHVTKTALDSDIYVGNSLIHFYGRMALFTDARVLFDKMPFRDVGSWNTLMSIYN 154

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACS 62
           D+    E L+LF+++  EGI  ++ T + +  AC+
Sbjct: 155 DFSDSGEVLILFKQLMFEGIVADKITLVILFSACA 189


>ref|XP_002523172.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537579|gb|EEF39203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  149 bits (375), Expect = 5e-34
 Identities = 70/114 (61%), Positives = 92/114 (80%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR +H FI++ +I  D+F+ T+LI+MY KCGS E+ALVTFYKME KDVF WTAVI GLA+
Sbjct: 341 GRVVHMFINRNDIKQDIFVKTALIDMYFKCGSPEEALVTFYKMEYKDVFTWTAVIEGLAN 400

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFYK 2
            G+G  AL LF++ME +GI+PNEATF++ L +C HSGLV+EGC +F +MV+ YK
Sbjct: 401 NGYGNVALNLFKQMEEQGIQPNEATFVSALTSCRHSGLVKEGCQMFRKMVEVYK 454


>ref|XP_002299041.1| hypothetical protein POPTR_0001s46850g [Populus trichocarpa]
           gi|222846299|gb|EEE83846.1| hypothetical protein
           POPTR_0001s46850g [Populus trichocarpa]
          Length = 601

 Score =  147 bits (372), Expect = 1e-33
 Identities = 72/114 (63%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
 Frame = -1

Query: 340 RRIHRFIHQR-NITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           R +HRFI++  N+  DVFL T+LI MYSKCGS+E+ALVTFYKME  DVF WTA+I GLA+
Sbjct: 332 RLLHRFINRNSNVRQDVFLKTALITMYSKCGSVEEALVTFYKMEYTDVFTWTAMIEGLAN 391

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFYK 2
            G+G EAL +F +ME +GI+PNE+T ++VL AC HSGLV+EGC LF  MV  YK
Sbjct: 392 NGYGNEALSMFNRMENQGIRPNESTLVSVLTACIHSGLVKEGCQLFKSMVSDYK 445


>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  130 bits (328), Expect = 1e-28
 Identities = 62/113 (54%), Positives = 83/113 (73%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           G+ I R++ ++N+ L V L T+LI+MYSKCGS+E AL  F+KM+ K+V AW+A+I GLA 
Sbjct: 287 GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAI 346

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
            G GK+AL LF +ME++G+KPNE TF+ +L ACSHS LV EGC  F  M   Y
Sbjct: 347 NGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIY 399



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/80 (37%), Positives = 44/80 (55%)
 Frame = -1

Query: 277 LINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEGIKPN 98
           +I  Y KCG  + A   F  M  +DV +W+ +I G       KE L LF+ M  E I+PN
Sbjct: 208 MIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPN 267

Query: 97  EATFLAVLMACSHSGLVQEG 38
           E+  +  L AC+H G +++G
Sbjct: 268 ESVLVNALSACAHLGAMEQG 287


>ref|XP_002314110.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222850518|gb|EEE88065.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 738

 Score =  123 bits (308), Expect = 3e-26
 Identities = 61/114 (53%), Positives = 80/114 (70%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           LG  IH +I ++ I L+  ++TSLI+MYSKCG LE AL  FY +E +DVF W+A+I GLA
Sbjct: 383 LGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLA 442

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
            +GHG+ A+ LF KM+   +KPN  TF  +L ACSHSGLV EG L F++M   Y
Sbjct: 443 MHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVY 496



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 36/94 (38%), Positives = 59/94 (62%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           G+ IH  + + +   D+F+S SLI+ YS  G L+ A + F K+  KD+ +W ++I+G   
Sbjct: 150 GQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQ 209

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACS 62
            G  +EAL LF++M++E  +PN  T + VL AC+
Sbjct: 210 GGSPEEALQLFKRMKMENARPNRVTMVGVLSACA 243



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 32/134 (23%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA- 167
           GR    +I +  I +++ LS ++++MY KCGSLEDA   F KME KD+ +WT +I G A 
Sbjct: 251 GRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAK 310

Query: 166 --DY----------------------------GHGKEALVLFEKMEL-EGIKPNEATFLA 80
             DY                            G  KEAL +F +++L +  KPNE T  +
Sbjct: 311 VGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAS 370

Query: 79  VLMACSHSGLVQEG 38
            L AC+  G +  G
Sbjct: 371 TLAACAQLGAMDLG 384


>ref|XP_006306144.1| hypothetical protein CARUB_v10011638mg [Capsella rubella]
            gi|482574855|gb|EOA39042.1| hypothetical protein
            CARUB_v10011638mg [Capsella rubella]
          Length = 1308

 Score =  122 bits (306), Expect = 5e-26
 Identities = 52/114 (45%), Positives = 83/114 (72%)
 Frame = -1

Query: 346  LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
            +G+ +H++  Q    LDV++ ++L++MYSKCGSLE AL+ F+ +  K++F W ++I GLA
Sbjct: 1034 IGKEVHKYTTQNGFVLDVYIGSALVDMYSKCGSLERALLIFFNLPKKNLFCWNSIIEGLA 1093

Query: 166  DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
             +G  +EAL +F KM+ E +KPN  TF++VL AC+H+GLV+EG  ++D M+  Y
Sbjct: 1094 AHGCAQEALKMFAKMKSESVKPNTVTFVSVLTACTHAGLVEEGRRIYDSMIDDY 1147



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/87 (39%), Positives = 51/87 (58%)
 Frame = -1

Query: 298  DVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKME 119
            +V  S  LI+ Y+K G+LE A   F +M  KD  +WT +I G +      EA+ +F +M 
Sbjct: 949  NVATSNCLIDGYTKLGNLEIAESLFNQMPVKDTISWTTMINGYSHNKRYSEAVAVFYRMT 1008

Query: 118  LEGIKPNEATFLAVLMACSHSGLVQEG 38
             EGI P+E T   V+ AC+H G+++ G
Sbjct: 1009 EEGIIPDEVTMSTVVSACAHLGVLEIG 1035


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  122 bits (306), Expect = 5e-26
 Identities = 58/114 (50%), Positives = 81/114 (71%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           LG  IH +I ++ + L+  L+TSLI+MY KCG L+ AL+ F+ +E KDVF W+A+I GLA
Sbjct: 388 LGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLA 447

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
            +GHGK+A+ LF KM+ + +KPN  TF  +L ACSH GLV+EG   F++M   Y
Sbjct: 448 MHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVY 501



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 54/94 (57%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           G+  H  + +  +  DVF+  SLI+ Y+KCG L      F  +  +DV +W ++IT    
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACS 62
            G  +EAL LF++ME + +KPN  T + VL AC+
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACA 248



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 32/134 (23%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR +H +I +  I   + LS ++++MY+KCGS+EDA   F KM  KD+ +WT ++ G A 
Sbjct: 256 GRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAK 315

Query: 163 YGH-------------------------------GKEALVLFEKMEL-EGIKPNEATFLA 80
            G                                 KEAL LF +++L +  KP+E T ++
Sbjct: 316 IGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVS 375

Query: 79  VLMACSHSGLVQEG 38
            L AC+  G +  G
Sbjct: 376 TLSACAQLGAMDLG 389


>ref|XP_002301860.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345843|gb|EEE81133.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 933

 Score =  122 bits (305), Expect = 7e-26
 Identities = 55/112 (49%), Positives = 83/112 (74%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           LG+ IH +I Q    LDV++ ++LI+MY+KCGSL+ +L+ F+K+  K++F W +VI GLA
Sbjct: 261 LGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLA 320

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVK 11
            +G+ +EAL +F+KME E IKPN  TF++VL AC+H+GL++EG   F  M +
Sbjct: 321 VHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTR 372


>ref|XP_004491724.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cicer arietinum]
          Length = 423

 Score =  122 bits (305), Expect = 7e-26
 Identities = 52/114 (45%), Positives = 84/114 (73%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           LG+ +H ++      LDV++ +SLI+MY+KCG +E +L+ FYK+  K++F W ++I GLA
Sbjct: 150 LGKEVHFYLMVNGFGLDVYIGSSLIDMYAKCGCVERSLLVFYKLREKNLFCWNSMIDGLA 209

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
            +G+ KEAL +FEKM +EG++PN  TF+++L AC+H+GL++EG   F  M++ Y
Sbjct: 210 THGYAKEALRMFEKMVMEGMRPNGVTFVSILTACTHAGLIEEGRCFFASMIEDY 263


>emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  122 bits (305), Expect = 7e-26
 Identities = 58/95 (61%), Positives = 73/95 (76%)
 Frame = -1

Query: 289 LSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEG 110
           ++ +LI+MYSKCGS++DA   F KME KDVF+WTA+ITG A +G   EAL LFE+M+ +G
Sbjct: 579 INNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG 638

Query: 109 IKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
           IKPN+ TFLA+LMAC+H GLVQEG   FD M   Y
Sbjct: 639 IKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDY 673



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTF--YKMECKDVFAWTAVITG 173
           L R++H +  +    LD  +  + I MYS+CG LEDA   F    +   D+  W ++I  
Sbjct: 139 LCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAA 198

Query: 172 LADYGHGKEALVLFEKMELEG-IKPNEATFLAVLMACSHSGLVQEGCLLFDRMVK 11
              +G   E L LF KM   G + P E T+ +V+ AC  SG  + G ++  R++K
Sbjct: 199 YIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = -1

Query: 289 LSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKM-ELE 113
           L  SL+  Y KCG+L+ A   F ++  KDV +W A+I      G G+ AL LF +M ++E
Sbjct: 261 LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVE 320

Query: 112 -GIKPNEATFLAVLMACS 62
             ++PN  TFL++L A S
Sbjct: 321 PPVQPNRVTFLSLLSAVS 338



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR IH  I + ++ +D  ++ SLI  YSKC  +  A   F ++  +D+ +W +++ G   
Sbjct: 346 GREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQ 405

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSH--SGLV 47
                    +F++M L GI+P+  +   +  A S   SGL+
Sbjct: 406 NEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLI 446


>ref|XP_004511192.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145-like
            [Cicer arietinum]
          Length = 1049

 Score =  121 bits (304), Expect = 9e-26
 Identities = 52/114 (45%), Positives = 83/114 (72%)
 Frame = -1

Query: 346  LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
            LG+ +H ++      LDV++ +SLI+MY+KCG +E +L+ FYK+  K++F W ++I GLA
Sbjct: 776  LGKEVHFYLMVNGFGLDVYIGSSLIDMYAKCGCVERSLLVFYKLREKNLFCWNSMIDGLA 835

Query: 166  DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
             +G+ KEAL +FEKM +EGI+PN  TF+++L AC+H+G ++EG   F  M++ Y
Sbjct: 836  THGYAKEALRMFEKMVMEGIRPNGVTFVSILTACTHAGFIEEGRCFFASMIEDY 889


>ref|XP_002532374.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527930|gb|EEF30017.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 310

 Score =  121 bits (303), Expect = 1e-25
 Identities = 55/106 (51%), Positives = 80/106 (75%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           LG+ IH ++ Q    LDV++ +SLI+MY+KCGSL+ +L+ F+K++ K++F W +VI GLA
Sbjct: 191 LGKEIHLYVMQNGFDLDVYIGSSLIDMYAKCGSLDRSLLVFFKLQEKNLFCWNSVIEGLA 250

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLL 29
            +G+ KEAL +F KM  E IKPN  TF++VL AC+H+GLV+EG  L
Sbjct: 251 AHGYAKEALEMFRKMGREKIKPNGVTFISVLNACAHAGLVEEGLAL 296



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 44/81 (54%)
 Frame = -1

Query: 280 SLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEGIKP 101
           +LI  YSK   LE A   F +M  +D+ +WT ++   A      EALV+F +M   GI P
Sbjct: 112 TLIYGYSKLRDLESAEFLFSQMHERDIISWTTMVNCYAQNKKFGEALVVFNQMIKTGICP 171

Query: 100 NEATFLAVLMACSHSGLVQEG 38
           +E T   V+ AC+H G +  G
Sbjct: 172 DEVTMATVISACAHLGALDLG 192


>ref|XP_004981445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like isoform X1 [Setaria italica]
           gi|514813325|ref|XP_004981446.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like isoform X2 [Setaria italica]
           gi|514813327|ref|XP_004981447.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like isoform X3 [Setaria italica]
          Length = 605

 Score =  120 bits (302), Expect = 1e-25
 Identities = 58/110 (52%), Positives = 81/110 (73%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           LGR IH ++ +  +   V +ST+LI+MY+KCGSLEDA+  F  ME +D  AW+ +I   A
Sbjct: 251 LGRWIHDYVRKIGLDSLVKVSTALIDMYAKCGSLEDAVAVFQGMESRDKQAWSVMIVAYA 310

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRM 17
           ++G+G+EA++LFE+M+ +GIKP++ TFL VL ACSHSGLV EG   FD M
Sbjct: 311 NHGYGREAILLFEEMKKQGIKPDDITFLGVLYACSHSGLVSEGLQYFDDM 360



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/111 (31%), Positives = 58/111 (52%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR+ H    +       ++  +LINMY++CG +  A   F +ME   V ++ A+I     
Sbjct: 151 GRQAHAVAAKVGAAGHEYVRPTLINMYAECGDVRAARAMFDRMEGDCVVSYNAMIAAAVR 210

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVK 11
                EALVLF +M+ +G+KP   T ++ L AC+  G ++ G  + D + K
Sbjct: 211 SSRPGEALVLFREMQAKGLKPTSVTVISALSACALLGALELGRWIHDYVRK 261


>ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
            lyrata] gi|297338164|gb|EFH68581.1| hypothetical protein
            ARALYDRAFT_311694 [Arabidopsis lyrata subsp. lyrata]
          Length = 1329

 Score =  120 bits (301), Expect = 2e-25
 Identities = 51/114 (44%), Positives = 81/114 (71%)
 Frame = -1

Query: 346  LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
            +G+ +H +  Q    LDV++ ++L++MYSKCGSLE AL+ F+ +  K++F W ++I GLA
Sbjct: 1057 IGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1116

Query: 166  DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
             +G  +EAL +F KME+E +KPN  TF++V  AC+H+GLV+EG  ++  M+  Y
Sbjct: 1117 AHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDY 1170



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/80 (40%), Positives = 50/80 (62%)
 Frame = -1

Query: 277  LINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEGIKPN 98
            LI+ Y++ G+LE A   F +M  KD+ +WT +I G +     +EA+ +F KM  EGI P+
Sbjct: 979  LIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPD 1038

Query: 97   EATFLAVLMACSHSGLVQEG 38
            E T   V+ AC+H G+++ G
Sbjct: 1039 EVTMSTVISACAHLGVLEIG 1058


>ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Brachypodium distachyon]
          Length = 593

 Score =  120 bits (300), Expect = 3e-25
 Identities = 57/114 (50%), Positives = 78/114 (68%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR +H +I ++ I  DV + TSL++MY+KCG LE +L  F KM  K++ +W A+I G A 
Sbjct: 331 GRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFAL 390

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFYK 2
           +GHG+EAL  F++M   G+ PNE +F+ VL AC HSGLVQEG  LF+ M   YK
Sbjct: 391 HGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYK 444



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/102 (29%), Positives = 57/102 (55%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           G+ +H +  +R   L + +  ++++MY KC  L+ A   F ++  +DV +WT +I+GL  
Sbjct: 230 GKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQ 289

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEG 38
                +AL +F +M+   +KP++     VL AC+  G ++ G
Sbjct: 290 CKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESG 331



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = -1

Query: 343 GRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLAD 164
           GR++H    +      + +  +L+ +Y  CG   DA   F +M  +DV +WTA+++    
Sbjct: 132 GRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVR 191

Query: 163 YGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEG 38
            G   EALVL  +M+   + PNE T   VL+AC   G  + G
Sbjct: 192 GGRFAEALVLVGQMD---VVPNEGTLACVLVACGRLGAARAG 230


>sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
          Length = 577

 Score =  119 bits (299), Expect = 3e-25
 Identities = 51/114 (44%), Positives = 80/114 (70%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           +G+ +H +  Q    LDV++ ++L++MYSKCGSLE AL+ F+ +  K++F W ++I GLA
Sbjct: 305 IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 364

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
            +G  +EAL +F KME+E +KPN  TF++V  AC+H+GLV EG  ++  M+  Y
Sbjct: 365 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 418



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = -1

Query: 286 STSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEGI 107
           S  LIN Y   G+LE A   F +M  KD+ +WT +I G +     +EA+ +F KM  EGI
Sbjct: 224 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 283

Query: 106 KPNEATFLAVLMACSHSGLVQEG 38
            P+E T   V+ AC+H G+++ G
Sbjct: 284 IPDEVTMSTVISACAHLGVLEIG 306


>ref|NP_172105.4| transcription factor EMB1444 [Arabidopsis thaliana]
            gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity
            to an unknown protein T5J8.5 gi|4263522 from Arabidopsis
            thaliana BAC T5J8 gb|AC004044 and contains multiple PPR
            PF|01535 repeats. ESTs gb|AV565358, gb|AV558710,
            gb|AV524184 come from this gene [Arabidopsis thaliana]
            gi|332189826|gb|AEE27947.1| bHLH transcription factor
            LHL1 [Arabidopsis thaliana]
          Length = 1322

 Score =  119 bits (299), Expect = 3e-25
 Identities = 51/114 (44%), Positives = 80/114 (70%)
 Frame = -1

Query: 346  LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
            +G+ +H +  Q    LDV++ ++L++MYSKCGSLE AL+ F+ +  K++F W ++I GLA
Sbjct: 1050 IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1109

Query: 166  DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
             +G  +EAL +F KME+E +KPN  TF++V  AC+H+GLV EG  ++  M+  Y
Sbjct: 1110 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 1163



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = -1

Query: 286  STSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEGI 107
            S  LIN Y   G+LE A   F +M  KD+ +WT +I G +     +EA+ +F KM  EGI
Sbjct: 969  SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028

Query: 106  KPNEATFLAVLMACSHSGLVQEG 38
             P+E T   V+ AC+H G+++ G
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIG 1051


>dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
          Length = 577

 Score =  119 bits (299), Expect = 3e-25
 Identities = 51/114 (44%), Positives = 80/114 (70%)
 Frame = -1

Query: 346 LGRRIHRFIHQRNITLDVFLSTSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLA 167
           +G+ +H +  Q    LDV++ ++L++MYSKCGSLE AL+ F+ +  K++F W ++I GLA
Sbjct: 305 IGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 364

Query: 166 DYGHGKEALVLFEKMELEGIKPNEATFLAVLMACSHSGLVQEGCLLFDRMVKFY 5
            +G  +EAL +F KME+E +KPN  TF++V  AC+H+GLV EG  ++  M+  Y
Sbjct: 365 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDY 418



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/83 (40%), Positives = 49/83 (59%)
 Frame = -1

Query: 286 STSLINMYSKCGSLEDALVTFYKMECKDVFAWTAVITGLADYGHGKEALVLFEKMELEGI 107
           S  LIN Y   G+LE A   F +M  KD+ +WT +I G +     +EA+ +F KM  EGI
Sbjct: 224 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 283

Query: 106 KPNEATFLAVLMACSHSGLVQEG 38
            P+E T   V+ AC+H G+++ G
Sbjct: 284 IPDEVTMSTVISACAHLGVLEIG 306