BLASTX nr result
ID: Sinomenium21_contig00047161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00047161
(352 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62505.1| hypothetical protein VITISV_010653 [Vitis vinifera] 52 2e-06
gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subc... 50 2e-06
emb|CAN76477.1| hypothetical protein VITISV_028117 [Vitis vinifera] 51 2e-06
gb|AAN01258.1| Putative retroelement [Oryza sativa Japonica Grou... 50 2e-06
emb|CAN83097.1| hypothetical protein VITISV_027815 [Vitis vinifera] 50 4e-06
gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Ja... 49 5e-06
gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subc... 49 5e-06
gb|AAX96815.1| retrotransposon protein, putative, Ty3-gypsy sub-... 47 6e-06
gb|ABA92886.2| retrotransposon protein, putative, Ty3-gypsy subc... 47 6e-06
gb|AAP53313.2| transposon protein, putative, unclassified [Oryza... 49 6e-06
gb|AAM18743.1|AC092548_21 putative polyprotein [Oryza sativa Jap... 49 6e-06
gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group] 48 8e-06
gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group] 48 8e-06
gb|AAT58762.1| putative polyprotein [Oryza sativa Japonica Group... 49 8e-06
emb|CAN64535.1| hypothetical protein VITISV_041855 [Vitis vinifera] 49 8e-06
gb|ABA98873.1| transposon protein, putative, unclassified [Oryza... 49 8e-06
gb|ABA96534.1| retrotransposon protein, putative, unclassified [... 49 8e-06
gb|ABF97286.1| transposon protein, putative, unclassified [Oryza... 49 1e-05
>emb|CAN62505.1| hypothetical protein VITISV_010653 [Vitis vinifera]
Length = 883
Score = 52.4 bits (124), Expect(2) = 2e-06
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = -3
Query: 224 CKAGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDS 45
C +GS GL+L S G+ + F A+NNE EY+A+L G+ +V + S++KLRI SDS
Sbjct: 398 CSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLVLALSVSKLRIYSDS 457
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMS 298
P S+KGQV+ADF+ E S
Sbjct: 357 PRLSMKGQVMADFMLEYS 374
>gb|ABA93438.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1129
Score = 50.4 bits (119), Expect(2) = 2e-06
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY ALLVG+++ + + +L +K DS
Sbjct: 639 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYQALLVGIRVAAALGVRQLIVKGDSELV 698
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 699 ANQVHKDYKC 708
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 595 PRTAIKSQVLADFVADWTI 613
>emb|CAN76477.1| hypothetical protein VITISV_028117 [Vitis vinifera]
Length = 925
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -3
Query: 218 AGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDS 45
+GSR GL+L S G+ + F A+NNE EY+A+L G+ + S S++KLRI SDS
Sbjct: 412 SGSRVGLLLQSPTGEHLEQAIRLRFSASNNEAEYEAILSGLDLALSLSVSKLRIYSDS 469
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMS 298
P S+KGQV+ADFV E S
Sbjct: 369 PRLSMKGQVMADFVLEYS 386
>gb|AAN01258.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431344|gb|AAP53139.1| transposon protein, putative,
unclassified [Oryza sativa Japonica Group]
Length = 645
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY+ LLVG++ + + +L +K DS
Sbjct: 344 GASAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLVGIRAAAALGVKRLIVKGDSELV 403
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 404 ANQVHKDYKC 413
Score = 27.3 bits (59), Expect(2) = 2e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSLIE 289
P T+IK QVLADFV++ ++ E
Sbjct: 300 PRTAIKSQVLADFVADWTMPE 320
>emb|CAN83097.1| hypothetical protein VITISV_027815 [Vitis vinifera]
Length = 969
Score = 50.1 bits (118), Expect(2) = 4e-06
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -3
Query: 218 AGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDS 45
+GSR GL+L S G+ + F A+NNE EY+A+L G+ + + S++KLRI SDS
Sbjct: 448 SGSRVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRIYSDS 505
Score = 26.2 bits (56), Expect(2) = 4e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMS 298
P S+KGQV+ADFV E S
Sbjct: 405 PRLSMKGQVMADFVLEYS 422
>gb|AAK52121.1|AC079936_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 2079
Score = 49.3 bits (116), Expect(2) = 5e-06
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AGL+L S G + + +F ATNN EY+ LL G++ + + +L +K DS
Sbjct: 1534 GAGAGLILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELV 1593
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 1594 ANQVHKDYKC 1603
Score = 26.6 bits (57), Expect(2) = 5e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 1490 PQTAIKSQVLADFVADWTM 1508
>gb|ABB47490.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1783
Score = 49.3 bits (116), Expect(2) = 5e-06
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AGL+L S G + + +F ATNN EY+ LL G++ + + +L +K DS
Sbjct: 1469 GAGAGLILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELV 1528
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 1529 ANQVHKDYKC 1538
Score = 26.6 bits (57), Expect(2) = 5e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 1425 PQTAIKSQVLADFVADWTM 1443
>gb|AAX96815.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 787
Score = 47.4 bits (111), Expect(2) = 6e-06
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ G +L S G + + +F ATNN EY+ LL+G++ + + +L +K DS
Sbjct: 261 GAGTGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLIGIRAAAALGVKRLIVKGDSELV 320
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 321 ANQVHKDYKC 330
Score = 28.1 bits (61), Expect(2) = 6e-06
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSLIE 289
P T+IK QVLADFV++ ++++
Sbjct: 217 PRTTIKSQVLADFVADWTMLD 237
>gb|ABA92886.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 772
Score = 47.4 bits (111), Expect(2) = 6e-06
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ G +L S G + + +F ATNN EY+ LL+G++ + + +L +K DS
Sbjct: 261 GAGTGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLIGIRAAAALGVKRLIVKGDSELV 320
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 321 ANQVHKDYKC 330
Score = 28.1 bits (61), Expect(2) = 6e-06
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSLIE 289
P T+IK QVLADFV++ ++++
Sbjct: 217 PRTTIKSQVLADFVADWTMLD 237
>gb|AAP53313.2| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 411
Score = 48.9 bits (115), Expect(2) = 6e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY+ LL G+K + + +L +K DS
Sbjct: 265 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIKAAAALGVRRLIVKGDSELV 324
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 325 ANQVHKDYKC 334
Score = 26.6 bits (57), Expect(2) = 6e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 221 PRTAIKSQVLADFVADWTM 239
>gb|AAM18743.1|AC092548_21 putative polyprotein [Oryza sativa Japonica Group]
Length = 356
Score = 48.9 bits (115), Expect(2) = 6e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY+ LL G+K + + +L +K DS
Sbjct: 210 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIKAAAALGVRRLIVKGDSELV 269
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 270 ANQVHKDYKC 279
Score = 26.6 bits (57), Expect(2) = 6e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 166 PRTAIKSQVLADFVADWTM 184
>gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1672
Score = 47.8 bits (112), Expect(2) = 8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY+ LL G++ + + +L +K DS
Sbjct: 1132 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELV 1191
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 1192 ANQVHKDYKC 1201
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSLIE 289
P T+IK QVLADFV++ ++ E
Sbjct: 1088 PRTAIKSQVLADFVADWNMPE 1108
>gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 47.8 bits (112), Expect(2) = 8e-06
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY+ LL G++ + + +L +K DS
Sbjct: 840 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELV 899
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 900 ANQVHKDYKC 909
Score = 27.3 bits (59), Expect(2) = 8e-06
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSLIE 289
P T+IK QVLADFV++ ++ E
Sbjct: 796 PRTAIKSQVLADFVADWNMPE 816
>gb|AAT58762.1| putative polyprotein [Oryza sativa Japonica Group]
gi|49328085|gb|AAT58784.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1178
Score = 48.5 bits (114), Expect(2) = 8e-06
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L+S G + + +F ATNN EY+ LL G++ + + +L +K DS
Sbjct: 1024 GAGAGFILMSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALGVKRLIVKGDSELV 1083
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 1084 ANQVHKDYKC 1093
Score = 26.6 bits (57), Expect(2) = 8e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 980 PRTAIKSQVLADFVADWTM 998
>emb|CAN64535.1| hypothetical protein VITISV_041855 [Vitis vinifera]
Length = 958
Score = 48.9 bits (115), Expect(2) = 8e-06
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = -3
Query: 218 AGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTF 39
+GS GL+L S G+ + F A+NNE EY+A+L G+ + + S++KLRI SDS
Sbjct: 465 SGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVSKLRIFSDSQL 524
Query: 38 SK 33
+K
Sbjct: 525 AK 526
Score = 26.2 bits (56), Expect(2) = 8e-06
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMS 298
P S+KGQV+ADFV E S
Sbjct: 422 PRLSMKGQVMADFVLEYS 439
>gb|ABA98873.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 864
Score = 48.9 bits (115), Expect(2) = 8e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+RAG +L S G + + +F ATNN EY+ LL G++ + +L +K DS
Sbjct: 438 GARAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAATLEAKRLIVKGDSELV 497
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 498 TNQVHKDYKC 507
Score = 26.2 bits (56), Expect(2) = 8e-06
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADF+++ ++
Sbjct: 394 PRTAIKSQVLADFIADWTM 412
>gb|ABA96534.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 753
Score = 48.5 bits (114), Expect(2) = 8e-06
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+ AG +L S G + + +F ATNN EY+ LL G++ + + + +L +K DS
Sbjct: 363 GAGAGFILTSPSGDQFKHAIQLNFRATNNTAEYEGLLAGIRAIAALGVRRLVMKGDSKLV 422
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 423 ANQVHKDYKC 432
Score = 26.6 bits (57), Expect(2) = 8e-06
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK QVLADFV++ ++
Sbjct: 319 PRTAIKSQVLADFVADWTM 337
>gb|ABF97286.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1515
Score = 48.5 bits (114), Expect(2) = 1e-05
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -3
Query: 215 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQSFSITKLRIKSDSTFS 36
G+RAG +L S G + + +F ATNN EY+ LL G++ + +L +K DS
Sbjct: 940 GARAGFILTSLSGDQFKHAIHLNFRATNNTAEYEGLLAGIRAAAALGAKRLIVKGDSELI 999
Query: 35 KPSHHRESSC 6
H++ C
Sbjct: 1000 ANQVHKDYKC 1009
Score = 26.2 bits (56), Expect(2) = 1e-05
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 351 PCTSIKGQVLADFVSEMSL 295
P T+IK Q+LADFV++ ++
Sbjct: 896 PRTAIKSQILADFVADWTM 914