BLASTX nr result
ID: Sinomenium21_contig00047150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00047150
(358 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB39950.1| putative polyprotein [Oryza sativa Japonica Group] 61 1e-07
emb|CAE02456.1| OSJNBa0042D13.9 [Oryza sativa Japonica Group] 61 2e-07
gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group... 60 2e-07
gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica... 60 3e-07
gb|AAO73254.1| putative GAG-POL precursor [Oryza sativa Japonica... 59 5e-07
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap... 59 5e-07
gb|AAT47104.1| hypothetical protein [Oryza sativa Japonica Group] 59 5e-07
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap... 59 5e-07
gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subc... 59 9e-07
gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Jap... 59 9e-07
emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group] 59 9e-07
gb|ABG65975.1| retrotransposon protein, putative, Ty3-gypsy subc... 59 9e-07
gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subc... 59 9e-07
gb|EXB66084.1| hypothetical protein L484_003885 [Morus notabilis] 58 1e-06
gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group... 58 1e-06
gb|ABA95874.1| retrotransposon protein, putative, unclassified [... 58 1e-06
gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
emb|CAD40750.1| OSJNBa0081G05.3 [Oryza sativa Japonica Group] 58 1e-06
emb|CAH66306.1| OSIGBa0135K14.3 [Oryza sativa Indica Group] gi|1... 58 1e-06
>dbj|BAB39950.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1579
Score = 61.2 bits (147), Expect = 1e-07
Identities = 35/97 (36%), Positives = 54/97 (55%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + LTL G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 97 TKAKVIHLTLDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 156
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 157 GESIREYMRRFSQARCQVQDITEASVINAASAGLLEG 193
>emb|CAE02456.1| OSJNBa0042D13.9 [Oryza sativa Japonica Group]
Length = 303
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 97 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 156
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA +AG+ G
Sbjct: 157 GESIREYMRRFSQARCQVQDITEASVINAALAGLLEG 193
>gb|AAV24920.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733857|gb|AAV59364.1| unknown protein [Oryza sativa
Japonica Group]
Length = 1279
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ++
Sbjct: 364 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRQ 423
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 424 GESIREYMRRFSQAWCQVQDITEASVINAASAGLLEG 460
>gb|AAO23086.1| putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 971
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 405 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 464
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V+D +E + +NA AG+ G
Sbjct: 465 GESIREYMRRFSQARCQVEDITEASVINAASAGLLEG 501
>gb|AAO73254.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|108709218|gb|ABF97013.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 908
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 405 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 464
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 465 GESIREYMRRFSQAWCQVQDITEASVINAASAGLLEG 501
>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431922|gb|AAP53628.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1292
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 97 TKAKVIHLALDGIARSWYFNLPDNSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 156
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 157 GESIREYMRRFSQARCQVQDITEASVINAASAGLLEG 193
>gb|AAT47104.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 606
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 389 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 448
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 449 GESIREYMHRFSQARCQVQDITEASVINAASAGLLEG 485
>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1291
Score = 59.3 bits (142), Expect = 5e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 97 TKAKVIHLALDGIARSWYFNLPDNSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 156
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 157 GESIREYMRRFSQARCQVQDITEASVINAASAGLLEG 193
>gb|ABB47013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 108 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFQGTYEEPKTQQHLLGIRQRP 167
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
G++++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 168 GQSIREYMRRFSQARCQVQDITEASVINAASAGLLEG 204
>gb|AAL58173.1|AC093181_19 putative polyprotein [Oryza sativa Japonica Group]
Length = 1931
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 544 TKAKVIHLALDGIARSWYFNLLANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 603
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 604 GESIREYMRRFSQARCHVQDITEASVINATSAGLLEG 640
>emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
Length = 1847
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/97 (34%), Positives = 54/97 (55%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F + K HLL IRQK+
Sbjct: 465 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYKEPKTQQHLLGIRQKQ 524
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D ++ + +NA AG+ G
Sbjct: 525 GESIREYMRRFSQARCQVQDITKASVINAASAGLLEG 561
>gb|ABG65975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/94 (35%), Positives = 52/94 (55%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ++
Sbjct: 199 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLHDVFVLNFRGTNEEPKTQQHLLGIRQRQ 258
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGM 71
GE+++EY+ RF V D +E + +NA AG+
Sbjct: 259 GESIREYMRRFLQARCQVQDITEASVINATSAGL 292
>gb|AAP53331.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2035
Score = 58.5 bits (140), Expect = 9e-07
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 544 TKAKVIHLALDGIARSWYFNLLANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 603
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 604 GESIREYMRRFSQARCHVQDITEASVINATSAGLLEG 640
>gb|EXB66084.1| hypothetical protein L484_003885 [Morus notabilis]
Length = 288
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/94 (30%), Positives = 54/94 (57%)
Frame = -1
Query: 349 MCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKEG 170
MCRA L+ A++ ++ LKP+SV+S+++L +F+ F+ K+ P +L + Q
Sbjct: 88 MCRAFRNHLSDSARRWFRSLKPNSVASWDDLKNVFLTQFIGVKKYIPPKQNLSRVYQGPD 147
Query: 169 ENLKEYLVRFNIEVV*VDDCSERATLNACIAGMR 68
E+LK+++ RF +V + ++ L +A MR
Sbjct: 148 ESLKDWIARFGEQVAATEGITDEVALMGALASMR 181
>gb|AAO37471.1| putative polyprotein [Oryza sativa Japonica Group]
gi|41393196|gb|AAS01919.1| putative polyprotein [Oryza
sativa Japonica Group] gi|108709171|gb|ABF96966.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1535
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 354 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 413
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D E + +NA AG+ G
Sbjct: 414 GESIREYMRRFSQARCQVQDIIEASVINAASAGLLEG 450
>gb|ABA95874.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 663
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ
Sbjct: 447 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQSP 506
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 507 GESIREYMRRFSQARCQVQDITEASIINAASAGLLEG 543
>gb|ABA99442.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1767
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + L L G A+ Y L +S+ S+ +L +F+ F E K HLL IRQ+
Sbjct: 354 TKAMVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 413
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 414 GESIREYMRRFSQARCQVQDITEASVINAASAGLLEG 450
>gb|AAP53721.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1260
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S+ S+ +L +F+ F+ E K HLL I Q+
Sbjct: 201 TKAKVIHLALDGIARSWYFNLPANSIYSWEQLRDVFVLNFLGTYEEPKTQQHLLGICQRP 260
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA AG+ G
Sbjct: 261 GESIREYMRRFSQAQCQVQDITEASVINAASAGLLEG 297
>emb|CAD40750.1| OSJNBa0081G05.3 [Oryza sativa Japonica Group]
Length = 555
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S S+ +L +F+ F E K HLL IRQ+
Sbjct: 298 TKAKVIHLALDGIARSWYFNLPANSNYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 357
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA +AG+ G
Sbjct: 358 GESIREYMRRFSQARCQVQDITEASVINAALAGLVEG 394
>emb|CAH66306.1| OSIGBa0135K14.3 [Oryza sativa Indica Group]
gi|116309231|emb|CAH66321.1| OSIGBa0150M16.4 [Oryza
sativa Indica Group]
Length = 555
Score = 58.2 bits (139), Expect = 1e-06
Identities = 34/97 (35%), Positives = 53/97 (54%)
Frame = -1
Query: 352 TMCRALTLTLTGPAQK*YKKLKPSSVSSFNELCRLFIA*FVRAKEMKKPSSHLLSIRQKE 173
T + + L L G A+ Y L +S S+ +L +F+ F E K HLL IRQ+
Sbjct: 298 TKAKVIHLALDGIARSWYFNLPANSNYSWEQLRDVFVLNFRGTYEEPKTQQHLLGIRQRP 357
Query: 172 GENLKEYLVRFNIEVV*VDDCSERATLNACIAGMRGG 62
GE+++EY+ RF+ V D +E + +NA +AG+ G
Sbjct: 358 GESIREYMRRFSQARCQVQDITEASVINAALAGLVEG 394