BLASTX nr result
ID: Sinomenium21_contig00046894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00046894
(599 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007008765.1| Pentatricopeptide repeat-containing protein ... 59 8e-07
ref|XP_007008764.1| Pentatricopeptide repeat-containing protein ... 59 8e-07
ref|XP_004295453.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,... 57 3e-06
ref|XP_006415446.1| hypothetical protein EUTSA_v10006701mg [Eutr... 57 5e-06
ref|XP_004495567.1| PREDICTED: pentatricopeptide repeat-containi... 57 5e-06
ref|XP_006303892.1| hypothetical protein CARUB_v10008181mg [Caps... 57 5e-06
ref|NP_174349.1| pentatricopeptide repeat-containing protein [Ar... 57 5e-06
ref|NP_001185117.1| pentatricopeptide repeat-containing protein ... 57 5e-06
ref|XP_002890881.1| EMB2279 [Arabidopsis lyrata subsp. lyrata] g... 57 5e-06
ref|XP_007131486.1| hypothetical protein PHAVU_011G017600g [Phas... 56 7e-06
>ref|XP_007008765.1| Pentatricopeptide repeat-containing protein isoform 2 [Theobroma
cacao] gi|508725678|gb|EOY17575.1| Pentatricopeptide
repeat-containing protein isoform 2 [Theobroma cacao]
Length = 719
Score = 59.3 bits (142), Expect = 8e-07
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VMFAC KYNLVHEFFRK+EKSS+PN+L YR
Sbjct: 487 EVMFACGKYNLVHEFFRKIEKSSMPNALTYR 517
>ref|XP_007008764.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao] gi|508725677|gb|EOY17574.1| Pentatricopeptide
repeat-containing protein isoform 1 [Theobroma cacao]
Length = 845
Score = 59.3 bits (142), Expect = 8e-07
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VMFAC KYNLVHEFFRK+EKSS+PN+L YR
Sbjct: 487 EVMFACGKYNLVHEFFRKIEKSSMPNALTYR 517
>ref|XP_004295453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 884
Score = 57.4 bits (137), Expect = 3e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VMFAC KYNLVHEFF+K++KSSIPN+L YR
Sbjct: 526 EVMFACGKYNLVHEFFKKMQKSSIPNALTYR 556
>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 856
Score = 57.4 bits (137), Expect = 3e-06
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VMFAC KYNLVHEFFRKV+KSSIPN+L Y+
Sbjct: 499 EVMFACGKYNLVHEFFRKVQKSSIPNALVYK 529
>ref|XP_006415446.1| hypothetical protein EUTSA_v10006701mg [Eutrema salsugineum]
gi|557093217|gb|ESQ33799.1| hypothetical protein
EUTSA_v10006701mg [Eutrema salsugineum]
Length = 968
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VM AC+KYNLVHEFFRK++KSSIPN+L YR
Sbjct: 627 EVMLACEKYNLVHEFFRKMQKSSIPNALAYR 657
>ref|XP_004495567.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Cicer arietinum]
Length = 883
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VMF+C KYNLVHEFFRK++KSSIPN L YR
Sbjct: 527 EVMFSCGKYNLVHEFFRKLQKSSIPNPLTYR 557
>ref|XP_006303892.1| hypothetical protein CARUB_v10008181mg [Capsella rubella]
gi|482572603|gb|EOA36790.1| hypothetical protein
CARUB_v10008181mg [Capsella rubella]
Length = 1019
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VM AC+KYNLVHEFFRK++KSSIPN+L YR
Sbjct: 675 EVMLACEKYNLVHEFFRKMQKSSIPNALAYR 705
>ref|NP_174349.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200328|sp|Q9SA76.1|PPR64_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g30610, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2279; Flags: Precursor
gi|4587517|gb|AAD25748.1|AC007060_6 T5I8.6 [Arabidopsis
thaliana] gi|332193128|gb|AEE31249.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1006
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VM AC+KYNLVHEFFRK++KSSIPN+L YR
Sbjct: 636 EVMLACEKYNLVHEFFRKMQKSSIPNALAYR 666
>ref|NP_001185117.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193129|gb|AEE31250.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 978
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VM AC+KYNLVHEFFRK++KSSIPN+L YR
Sbjct: 636 EVMLACEKYNLVHEFFRKMQKSSIPNALAYR 666
>ref|XP_002890881.1| EMB2279 [Arabidopsis lyrata subsp. lyrata]
gi|297336723|gb|EFH67140.1| EMB2279 [Arabidopsis lyrata
subsp. lyrata]
Length = 913
Score = 56.6 bits (135), Expect = 5e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VM AC+KYNLVHEFFRK++KSSIPN+L YR
Sbjct: 559 EVMLACEKYNLVHEFFRKMQKSSIPNALAYR 589
>ref|XP_007131486.1| hypothetical protein PHAVU_011G017600g [Phaseolus vulgaris]
gi|561004486|gb|ESW03480.1| hypothetical protein
PHAVU_011G017600g [Phaseolus vulgaris]
Length = 888
Score = 56.2 bits (134), Expect = 7e-06
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +2
Query: 506 QVMFACDKYNLVHEFFRKVEKSSIPNSLNYR 598
+VMF+C KYNLVHEFFRK++KS IPNSL YR
Sbjct: 523 EVMFSCGKYNLVHEFFRKLQKSFIPNSLTYR 553