BLASTX nr result
ID: Sinomenium21_contig00046889
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00046889
(637 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469838.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
ref|XP_007043481.1| Tetratricopeptide repeat-like superfamily pr... 90 6e-16
emb|CBI22109.3| unnamed protein product [Vitis vinifera] 89 8e-16
ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_002313272.1| hypothetical protein POPTR_0009s07170g [Popu... 88 2e-15
ref|XP_004139561.1| PREDICTED: pentatricopeptide repeat-containi... 70 7e-10
ref|XP_002533283.1| pentatricopeptide repeat-containing protein,... 69 9e-10
ref|XP_004169073.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006357531.1| PREDICTED: pentatricopeptide repeat-containi... 66 8e-09
ref|XP_004243315.1| PREDICTED: pentatricopeptide repeat-containi... 66 1e-08
ref|XP_002299968.2| hypothetical protein POPTR_0001s27990g, part... 65 2e-08
ref|XP_004487325.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_004487324.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_006447383.1| hypothetical protein CICLE_v10016159mg [Citr... 60 5e-07
>ref|XP_006469838.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X1 [Citrus sinensis]
Length = 390
Score = 90.9 bits (224), Expect = 3e-16
Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = -3
Query: 428 TSIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEER 249
TS+P L F+ SK Q +VT D+ +TNE LN+I++SVEN +E
Sbjct: 45 TSVPVASLWILPSFATVSKISGNYQSLVTGASLDEEDVTNEVLNRILASVENGSKSAKEM 104
Query: 248 CVAYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLL 75
C YIE+LC++G A +LLQ+LR+ IFL P AYN +L+ + E D +L Q+ KDLL
Sbjct: 105 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLL 163
Query: 74 ESSGYSLRSTLYSTLANA 21
SS +L S Y+ A A
Sbjct: 164 VSS-RTLSSDCYTNFARA 180
>ref|XP_007043481.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590690339|ref|XP_007043482.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508707416|gb|EOX99312.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508707417|gb|EOX99313.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 387
Score = 89.7 bits (221), Expect = 6e-16
Identities = 57/144 (39%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Frame = -3
Query: 428 TSIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEER 249
TSIP G + SK + + T+ D+ ++T+E LNQI+++ EN E
Sbjct: 41 TSIPVGFPCICLLYPTVSKIVGNYKLLATQAAPDEEEVTDEVLNQILATCENTPKSSGET 100
Query: 248 CVAYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLL 75
C AY+ +LC++G A +LLQ+LR+ IF+ P AYNTLL A ER + +L Q+FKDLL
Sbjct: 101 CNAYVHKLCKAGNLSMAIRLLQSLRDKNIFI-PNAYNTLLAAAAERNEIDLSFQIFKDLL 159
Query: 74 ESSGYSLRSTLYSTLANALSNAAD 3
G L ST Y LA + + D
Sbjct: 160 VFHG-PLSSTCYLNLARSFVKSND 182
>emb|CBI22109.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 89.4 bits (220), Expect = 8e-16
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Frame = -3
Query: 476 SKSGPLVEIDEFQASG--TSIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNES 303
S GP+ + S ++IP ++ L FF+ SK Q + TE D+ + +E
Sbjct: 22 SNLGPIAATRRHRYSNFISAIPDDVSWILPFFAILSKSIGSYQSLATEASPDEEVVPDEF 81
Query: 302 LNQIVSSVENDQVFCEER-CVAYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLL 132
LN+I+S +E F E+ C YI++L ++G A + +Q+L + IFLSP AYN LL+
Sbjct: 82 LNEILSDIERSPKFSSEKLCTTYIDKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLV 141
Query: 131 VAGERRDFELLSQLFKDLLESSGYSLRSTLYSTLANALSNAAD 3
A E + LSQ+FKDLL S+ L ST Y +A + D
Sbjct: 142 AASEANAIDFLSQIFKDLLVSN-KPLSSTSYFNVAKVFTKTDD 183
>ref|XP_002279448.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Vitis vinifera]
Length = 357
Score = 88.6 bits (218), Expect = 1e-15
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = -3
Query: 428 TSIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEER 249
++IP ++ L FF+ SK Q + TE D+ + +E LN+I+S +E F E+
Sbjct: 11 SAIPDDVSWILPFFAILSKSIGSYQSLATEASPDEEVVPDEFLNEILSDIERSPKFSSEK 70
Query: 248 -CVAYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDL 78
C YI++L ++G A + +Q+L + IFLSP AYN LL+ A E + LSQ+FKDL
Sbjct: 71 LCTTYIDKLLKAGNPSAAARFMQSLHDKHIFLSPNAYNLLLVAASEANAIDFLSQIFKDL 130
Query: 77 LESSGYSLRSTLYSTLANALSNAAD 3
L S+ L ST Y +A + D
Sbjct: 131 LVSN-KPLSSTSYFNVAKVFTKTDD 154
>ref|XP_002313272.1| hypothetical protein POPTR_0009s07170g [Populus trichocarpa]
gi|222849680|gb|EEE87227.1| hypothetical protein
POPTR_0009s07170g [Populus trichocarpa]
Length = 382
Score = 87.8 bits (216), Expect = 2e-15
Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Frame = -3
Query: 428 TSIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEER 249
TSIP G + L F+ ++ + + + T D ++ +++LNQ++ +VEN C R
Sbjct: 35 TSIPVGSHWILPHFATITEVIGHYKQLTTRASFDGEEIKDDNLNQMLEAVENAPE-CTTR 93
Query: 248 CV--AYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKD 81
V AY+ LC++G A +LL+ LR+ IFL P AYN +L+ A E+ D E+LSQ+FKD
Sbjct: 94 KVGTAYVHNLCKAGTLFAAVRLLRLLRDKNIFLGPSAYNIILVTASEKNDVEILSQVFKD 153
Query: 80 LLESSGYSLRSTLYSTLANALSNAAD 3
L+ S SL S+LY LA + D
Sbjct: 154 LI-LSFQSLPSSLYLKLARGFVKSND 178
>ref|XP_004139561.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Cucumis sativus]
Length = 228
Score = 69.7 bits (169), Expect = 7e-10
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Frame = -3
Query: 374 KCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEERCVAYIERLCRSG--LGAT 201
KC ++ Q T+ F +++K+ +E LNQI++ EN E A I+++CR G A
Sbjct: 38 KCLSH-QSSGTKIFPNEVKVGDEDLNQIIAPTENASKCIHEIIDACIDKICRLGHLAAAA 96
Query: 200 KLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLLESSGYSLRSTLYSTLANA 21
LL++L N ++F S +AY+ +LL A ER D LL ++FK L S SL S Y + A A
Sbjct: 97 HLLKSLCNEKVFKSSEAYDMVLLAASERGDTPLLCEVFKVALLSC-KSLSSASYMSFARA 155
Query: 20 LSNAAD 3
+ D
Sbjct: 156 FTKTND 161
>ref|XP_002533283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526886|gb|EEF29094.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 405
Score = 69.3 bits (168), Expect = 9e-10
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = -3
Query: 302 LNQIVSSVENDQVFCEERCVAYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLV 129
LN I+++++N EE C Y+ +LC SG A +LLQ+L+N I L P AYN ++
Sbjct: 101 LNIILAAIQNAPSSIEEICTGYLHKLCNSGSLFVAVRLLQSLQNRNITLGPNAYNLVMEA 160
Query: 128 AGERRDFELLSQLFKDLLESSGYSLRSTLYSTLANALSNAAD 3
AGE +++S++FKDL+ S SL S+ + LA N D
Sbjct: 161 AGEANKADIVSRVFKDLMMSC-KSLPSSSFINLARGFINTND 201
>ref|XP_004169073.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Cucumis sativus]
Length = 363
Score = 67.4 bits (163), Expect = 3e-09
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Frame = -3
Query: 374 KCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEERCVAYIERLCRSG--LGAT 201
KC ++ Q T+ F +++K+ +E LNQI++ EN E A I+++CR G A
Sbjct: 38 KCLSH-QSSGTKIFPNEVKVGDEDLNQIIAPTENASNCIHEIIDACIDKICRLGHLAAAA 96
Query: 200 KLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLLESSGYSLRSTLYSTLANA 21
LL++L + ++F S +AY+ +LL A ER D LL ++FK L S SL S Y + A A
Sbjct: 97 HLLKSLCSEKVFKSSEAYDMVLLAASERGDTPLLCEVFKVALLSC-KSLSSASYMSFARA 155
Query: 20 LSNAAD 3
+ D
Sbjct: 156 FTKTND 161
>ref|XP_006357531.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X1 [Solanum tuberosum]
Length = 403
Score = 66.2 bits (160), Expect = 8e-09
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = -3
Query: 425 SIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEERC 246
SIP G+ + F APS F CQ T+ ++ ++ L +++ + N Q EE C
Sbjct: 62 SIPVGVLLNWPTF-APS-IFGCCQSFSTQA--SPTEIVDDVLAEVLLVMANSQSSGEELC 117
Query: 245 VAYIERLC--RSGLGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLLE 72
YI++ C R+ GA +L++ L + I L P A+N LL A E D LL Q FKDLL
Sbjct: 118 ATYIDKFCNDRNLSGAIRLVRTLHDKNISLRPSAHNRLLKAAIEENDIGLLCQCFKDLLV 177
Query: 71 SSGYSLRSTLYSTLANALSNAAD 3
S SL S+ Y A A D
Sbjct: 178 SC-KSLNSSTYLIFAQAFIKEND 199
>ref|XP_004243315.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Solanum lycopersicum]
Length = 403
Score = 65.9 bits (159), Expect = 1e-08
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = -3
Query: 425 SIPFGLNHSLAFFSAPSKCFNYCQPVVTETFNDQMKLTNESLNQIVSSVENDQVFCEERC 246
SIP G+ + F APS F CQ T+ ++ ++ L +I+ + N Q EE C
Sbjct: 62 SIPVGVLLNWPTF-APS-IFGCCQSFSTQA--SPAEIVDDVLAEILMVMANSQSSGEELC 117
Query: 245 VAYIERLC--RSGLGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLLE 72
YI++ C R+ GA +L++ L + I L P AY+ LL A E D LL Q FKDLL
Sbjct: 118 ATYIDKFCNDRNLSGAIRLVRTLHDKSIHLRPSAYDRLLKAAIEESDIHLLCQCFKDLLV 177
Query: 71 SSGYSLRSTLYSTLANALSNAAD 3
S L S+ Y A A D
Sbjct: 178 SC-KPLNSSTYLIFAQAFIKEND 199
>ref|XP_002299968.2| hypothetical protein POPTR_0001s27990g, partial [Populus
trichocarpa] gi|550348348|gb|EEE84773.2| hypothetical
protein POPTR_0001s27990g, partial [Populus trichocarpa]
Length = 348
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = -3
Query: 242 AYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLLES 69
AY+ LC++G A +LLQ+L + IFL P AYN +L+ A E+ D +LSQ+FKDL+ S
Sbjct: 64 AYVHNLCKAGNLFTAVRLLQSLCDKNIFLGPSAYNIILVAASEKNDIAILSQVFKDLIVS 123
Query: 68 SGYSLRSTLYSTLANALSNAAD 3
SL ST Y LA D
Sbjct: 124 C-QSLPSTSYLKLARGFVKTND 144
>ref|XP_004487325.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X2 [Cicer arietinum]
Length = 362
Score = 61.6 bits (148), Expect = 2e-07
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = -3
Query: 344 TETFNDQMKLTNESLNQIVSSVENDQVFCEERCVAYIERLCRSG--LGATKLLQNLRNTQ 171
TE D+ ++T E L + ++ VEN + AYI+++C++G A+++LQ L +
Sbjct: 34 TEASLDKERMTCEVLKEFLAIVENTPASVPKVYFAYIDKMCKTGNLTSASQVLQILNDKN 93
Query: 170 IFLSPKAYNTLLLVAGERRDFELLSQLFKDLLESSGYSLRSTLYSTLANALSNAAD 3
I +SP AYN +L+ A ++ D ++ Q+ K LL SG S +TL A A D
Sbjct: 94 IVVSPDAYNFILVEASQKNDIDISCQVLKKLL-LSGESPSATLCIKFAQAFRKVND 148
>ref|XP_004487324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X1 [Cicer arietinum]
Length = 362
Score = 61.6 bits (148), Expect = 2e-07
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = -3
Query: 344 TETFNDQMKLTNESLNQIVSSVENDQVFCEERCVAYIERLCRSG--LGATKLLQNLRNTQ 171
TE D+ ++T E L + ++ VEN + AYI+++C++G A+++LQ L +
Sbjct: 34 TEASLDKERMTCEVLKEFLAIVENTPASVPKVYFAYIDKMCKTGNLTSASQVLQILNDKN 93
Query: 170 IFLSPKAYNTLLLVAGERRDFELLSQLFKDLLESSGYSLRSTLYSTLANALSNAAD 3
I +SP AYN +L+ A ++ D ++ Q+ K LL SG S +TL A A D
Sbjct: 94 IVVSPDAYNFILVEASQKNDIDISCQVLKKLL-LSGESPSATLCIKFAQAFRKVND 148
>ref|XP_006447383.1| hypothetical protein CICLE_v10016159mg [Citrus clementina]
gi|557549994|gb|ESR60623.1| hypothetical protein
CICLE_v10016159mg [Citrus clementina]
Length = 287
Score = 60.1 bits (144), Expect = 5e-07
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = -3
Query: 248 CVAYIERLCRSG--LGATKLLQNLRNTQIFLSPKAYNTLLLVAGERRDFELLSQLFKDLL 75
C YIE+LC++G A +LLQ+LR+ IFL P AYN +L+ + E D +L Q+ KDLL
Sbjct: 2 CNGYIEKLCKAGNVSAAVRLLQSLRDKNIFL-PNAYNCVLVASAETNDIDLSFQILKDLL 60
Query: 74 ESSGYSLRSTLYSTLANA 21
SS +L S Y+ A A
Sbjct: 61 VSS-RTLSSDCYTNFARA 77