BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00046862
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516391.1| ribosomal large subunit pseudouridine syntha...    61   1e-07
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...    60   3e-07
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...    60   3e-07
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...    58   1e-06
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...    57   3e-06

>ref|XP_002516391.1| ribosomal large subunit pseudouridine synthase B, putative [Ricinus
           communis] gi|223544489|gb|EEF46008.1| ribosomal large
           subunit pseudouridine synthase B, putative [Ricinus
           communis]
          Length = 315

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
 Frame = +2

Query: 8   ASTMALTSSVFAKPSLTC-RNLRRIPFISCAASSHSA----DXXXXXXXXXXXXXXXXXX 172
           +S  ++ + +F+KPS+   + +R +P I+C++SS S+    +                  
Sbjct: 8   SSLHSIQNLIFSKPSVALLKPIRSLPRITCSSSSSSSSSSLEFNISFAPPKPKPKSPPQL 67

Query: 173 XXXQPTNSLFIPWILRGEDGDLKTQPTPPARFHHAMANAAT--TTSRNK 313
                   LFIPWI+RGEDG+LK Q  PPAR  HA+A+A T  T  +NK
Sbjct: 68  DLSDQEGQLFIPWIVRGEDGNLKLQSHPPARLIHALADAKTHNTKKQNK 116


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Fragaria vesca subsp. vesca]
          Length = 397

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/102 (37%), Positives = 48/102 (47%)
 Frame = +2

Query: 8   ASTMALTSSVFAKPSLTCRNLRRIPFISCAASSHSADXXXXXXXXXXXXXXXXXXXXXQP 187
           A+  +L SS+F K SL+    R +P ++C+ SS   +                       
Sbjct: 6   AALASLPSSLFFKRSLSLTPFRTLPRLTCS-SSLEFNITFAPAPKPKPDPNSLPASSSSS 64

Query: 188 TNSLFIPWILRGEDGDLKTQPTPPARFHHAMANAATTTSRNK 313
              LFIPWI+RGEDG LK Q  PPAR  H MA A T T   K
Sbjct: 65  GQQLFIPWIVRGEDGKLKLQSHPPARLLHEMAQADTKTKSKK 106


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
           gi|462414524|gb|EMJ19261.1| hypothetical protein
           PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
 Frame = +2

Query: 8   ASTMALTSSVFAKPSLTCRNLRRIPFISCA--ASSHSADXXXXXXXXXXXXXXXXXXXXX 181
           A+  +L+SS+F+KPSL+   +R +P I+C+   SS S+                      
Sbjct: 7   AALASLSSSLFSKPSLSLIPIRTLPRITCSLSTSSSSSSLEFNITFAPSKPKPKLKPDSA 66

Query: 182 QP-----TNSLFIPWILRGEDGDLKTQPTPPARFHHAMANAATTTSRNK 313
           +P        L IPWI+RGEDG+LK Q  PPARF  A+   + T  + +
Sbjct: 67  EPDPEALAGQLIIPWIVRGEDGNLKLQSHPPARFLQAIETKSKTKKKKE 115


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +2

Query: 191 NSLFIPWILRGEDGDLKTQPTPPARFHHAMANAATTTSRNKK 316
           + LFIPWI+RG+DG+LK Q  PPAR  HAMA+A T  S+ KK
Sbjct: 76  SQLFIPWIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKK 117


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
           gi|550332354|gb|EEE89362.2| hypothetical protein
           POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = +2

Query: 185 PTNSLFIPWILRGEDGDLKTQPTPPARFHHAMANAATTTSRNK 313
           P   LFIPWI+RGEDG+LK Q  PPAR  HA+A+A T   + K
Sbjct: 67  PPGQLFIPWIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKK 109