BLASTX nr result
ID: Sinomenium21_contig00046685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00046685
(374 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302000.2| pentatricopeptide repeat-containing family p... 129 3e-28
ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containi... 128 9e-28
gb|EXB53614.1| hypothetical protein L484_005164 [Morus notabilis] 126 4e-27
ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citr... 126 4e-27
ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containi... 126 4e-27
ref|XP_004301492.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
emb|CBI19832.3| unnamed protein product [Vitis vinifera] 122 7e-26
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi... 122 7e-26
ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily p... 121 1e-25
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,... 120 2e-25
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi... 117 2e-24
ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Caps... 114 2e-23
ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containi... 113 3e-23
ref|XP_006415862.1| hypothetical protein EUTSA_v10006846mg [Eutr... 112 5e-23
ref|NP_173907.1| pentatricopeptide repeat-containing protein [Ar... 112 5e-23
ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
ref|XP_002893429.1| pentatricopeptide repeat-containing protein ... 111 9e-23
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ... 109 4e-22
gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlise... 107 1e-21
>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344162|gb|EEE81273.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 797
Score = 129 bits (325), Expect = 3e-28
Identities = 66/95 (69%), Positives = 76/95 (80%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCCT----SHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
R AN Y S L++CC S+SLAR VHA+M+ SGF+PRGHILNRLIDIY KS L YA
Sbjct: 8 RTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYA 67
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R+LFD+IPQ DIVARTTLIAAYS +GD KL+RKIF
Sbjct: 68 RYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIF 102
>ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like isoform X1 [Citrus sinensis]
gi|568839239|ref|XP_006473596.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g25360-like isoform X2 [Citrus sinensis]
Length = 799
Score = 128 bits (321), Expect = 9e-28
Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 5/102 (4%)
Frame = -3
Query: 291 LRRGDF-RAIANHYASQLELCCTSH----SLARSVHANMVTSGFRPRGHILNRLIDIYCK 127
++ D+ R +AN YASQL+LC + SLARSVHA+M++SGF+PR HI+NRLIDIYCK
Sbjct: 3 MKNADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCK 62
Query: 126 SRLLPYARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
S L YAR LFD+IPQ DIVARTTLIAAYS SG+ KLAR++F
Sbjct: 63 SLKLVYARTLFDEIPQPDIVARTTLIAAYSASGNVKLAREMF 104
>gb|EXB53614.1| hypothetical protein L484_005164 [Morus notabilis]
Length = 800
Score = 126 bits (316), Expect = 4e-27
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 4/97 (4%)
Frame = -3
Query: 279 DFRAIANHYASQLELCCT----SHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLP 112
D R++AN +A+QL C S+SLAR++HA+M SGFRPRGHI+NRLID+YCK L
Sbjct: 7 DARSVANRFAAQLHFCRRQNPISYSLARTIHAHMTASGFRPRGHIVNRLIDVYCKCSNLS 66
Query: 111 YARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
YAR+LFD+IPQ D+VARTTL+AAYS +G+ KLAR+IF
Sbjct: 67 YARNLFDEIPQPDVVARTTLVAAYSAAGNLKLAREIF 103
>ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citrus clementina]
gi|557537225|gb|ESR48343.1| hypothetical protein
CICLE_v10000322mg [Citrus clementina]
Length = 799
Score = 126 bits (316), Expect = 4e-27
Identities = 65/93 (69%), Positives = 77/93 (82%), Gaps = 4/93 (4%)
Frame = -3
Query: 267 IANHYASQLELCCTSH----SLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYARH 100
+AN YASQL+LC + SLARSVHA+M++SGF+PRGHI+NRLIDIYCKS L YAR
Sbjct: 12 LANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPRGHIINRLIDIYCKSLNLVYARK 71
Query: 99 LFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
LFD+IPQ DIVARTTLIAAYS S + KLAR++F
Sbjct: 72 LFDEIPQPDIVARTTLIAAYSASDNVKLAREMF 104
>ref|XP_004238467.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Solanum lycopersicum]
Length = 804
Score = 126 bits (316), Expect = 4e-27
Identities = 63/97 (64%), Positives = 76/97 (78%), Gaps = 7/97 (7%)
Frame = -3
Query: 270 AIANHYASQLELCCTSH-------SLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLP 112
+IAN YA QL+L C H +L RS+HANM+TSGFRPR HILN LI+IYCK+ L
Sbjct: 17 SIANFYAVQLQLLCREHKHATSASALLRSIHANMITSGFRPRSHILNSLINIYCKNSGLV 76
Query: 111 YARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
YA+HLFD+IPQ D+VARTT+IAAYS SG+ KLAR+IF
Sbjct: 77 YAKHLFDRIPQPDVVARTTMIAAYSASGEPKLAREIF 113
>ref|XP_004301492.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like, partial [Fragaria vesca subsp. vesca]
Length = 800
Score = 125 bits (315), Expect = 5e-27
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 4/92 (4%)
Frame = -3
Query: 264 ANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYARHL 97
A+ YA+QL+LCC S SLAR++HA+M+ SGF PRGHILNRLID+YCKS L YA HL
Sbjct: 19 ASRYAAQLQLCCPQRPASFSLARTIHAHMIASGFSPRGHILNRLIDVYCKSNNLRYALHL 78
Query: 96 FDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
FD+IP DIVARTTL++AYS GD LAR++F
Sbjct: 79 FDEIPNPDIVARTTLVSAYSGVGDVTLARRVF 110
>ref|XP_006342194.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Solanum tuberosum]
Length = 804
Score = 124 bits (311), Expect = 1e-26
Identities = 65/113 (57%), Positives = 80/113 (70%), Gaps = 7/113 (6%)
Frame = -3
Query: 318 ATTTTLSQHLRRGDFRAIANHYASQLELCCTSH-------SLARSVHANMVTSGFRPRGH 160
A T+L G +IAN YA QL+L C H +L RS+HANM+TSGF PR H
Sbjct: 4 AVKTSLQNQSATG---SIANFYAVQLQLLCREHKHATSASALLRSIHANMITSGFSPRSH 60
Query: 159 ILNRLIDIYCKSRLLPYARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
ILN LI+IYCK+ L YA+HLFD+IPQ D+VARTT+IAAYS SG+ KLAR++F
Sbjct: 61 ILNNLINIYCKNSGLVYAKHLFDRIPQPDVVARTTMIAAYSASGEPKLAREVF 113
>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 122 bits (305), Expect = 7e-26
Identities = 60/95 (63%), Positives = 78/95 (82%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCCT----SHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
R +AN YA+QL+ CC S+S+AR+VHA+M+ SGF+PRG+ILNRLID+YCKS L A
Sbjct: 8 RRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSA 67
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
HLFD+I Q DIVARTTLIAA+S++G++ LAR+IF
Sbjct: 68 HHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIF 102
>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 122 bits (305), Expect = 7e-26
Identities = 60/95 (63%), Positives = 78/95 (82%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCCT----SHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
R +AN YA+QL+ CC S+S+AR+VHA+M+ SGF+PRG+ILNRLID+YCKS L A
Sbjct: 10 RRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSA 69
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
HLFD+I Q DIVARTTLIAA+S++G++ LAR+IF
Sbjct: 70 HHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIF 104
>ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508713722|gb|EOY05619.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 788
Score = 121 bits (303), Expect = 1e-25
Identities = 58/95 (61%), Positives = 75/95 (78%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
RA+AN YASQL+LC S SLA+++H+ M+ SGF PRGHILNRLID+YCKS + YA
Sbjct: 8 RAVANRYASQLQLCYPQTPASFSLAKAIHSRMIASGFHPRGHILNRLIDVYCKSSRIDYA 67
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R+LFD+IP DIV+RT+L+ AYS SG+ K AR++F
Sbjct: 68 RNLFDKIPAPDIVSRTSLVLAYSTSGNIKKAREMF 102
>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 574
Score = 120 bits (301), Expect = 2e-25
Identities = 60/95 (63%), Positives = 72/95 (75%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCCT----SHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
R ANHYAS L+LCC S+ AR++HA+M+ SGF+P GH LNRLI IYCKS L YA
Sbjct: 12 RTAANHYASLLQLCCPQSPISYPFARTIHAHMIASGFKPHGHTLNRLIYIYCKSSKLSYA 71
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R LFD+IPQ DIVARTTLI AYS +G KLA+++F
Sbjct: 72 RSLFDEIPQPDIVARTTLINAYSATGHLKLAKEMF 106
>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 117 bits (292), Expect = 2e-24
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 4/97 (4%)
Frame = -3
Query: 279 DFRAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLP 112
D R +AN Y +QL LCC +S+SLAR+VH +++ SGF+ RGHI+NRLIDIY KS
Sbjct: 6 DVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFV 65
Query: 111 YARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
YAR LFD+IPQ D++ARTTLI AYS G+ K+AR+IF
Sbjct: 66 YARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIF 102
>ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Capsella rubella]
gi|482575513|gb|EOA39700.1| hypothetical protein
CARUB_v10008344mg [Capsella rubella]
Length = 790
Score = 114 bits (284), Expect = 2e-23
Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
RAIAN YA+ L LC TS LAR+VHAN++T GF+PR HILNRLID+YCKS L YA
Sbjct: 9 RAIANRYAANLRLCLPIRRTSLQLARAVHANIITFGFQPRAHILNRLIDVYCKSSELRYA 68
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R LFD+I + D +ARTT+++ Y SGD LAR +F
Sbjct: 69 RELFDEISEPDKIARTTMVSGYCASGDITLARGVF 103
>ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 113 bits (282), Expect = 3e-23
Identities = 55/97 (56%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Frame = -3
Query: 279 DFRAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLP 112
D R +AN YA +L+LC S SLAR+VHA+M+ SGF+PRGH LNRL+++YCKS L
Sbjct: 6 DIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLV 65
Query: 111 YARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
YAR LF++IP D +ARTTLI AY G+ +L R+IF
Sbjct: 66 YARQLFEEIPNPDAIARTTLITAYCALGNLELGREIF 102
>ref|XP_006415862.1| hypothetical protein EUTSA_v10006846mg [Eutrema salsugineum]
gi|557093633|gb|ESQ34215.1| hypothetical protein
EUTSA_v10006846mg [Eutrema salsugineum]
Length = 787
Score = 112 bits (280), Expect = 5e-23
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
RAIAN YA+ L LC TS LAR+VH N++T GF+PR HILNRLID+YCKS L YA
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELHYA 68
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R LFD+I + D +ARTT+++ Y SGD LAR +F
Sbjct: 69 RQLFDEISEPDKIARTTMVSGYCASGDVTLARCVF 103
>ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g25360 gi|11067273|gb|AAG28801.1|AC079374_4
hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 112 bits (280), Expect = 5e-23
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
RAIAN YA+ L LC TS LAR+VH N++T GF+PR HILNRLID+YCKS L YA
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYA 68
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R LFD+I + D +ARTT+++ Y SGD LAR +F
Sbjct: 69 RQLFDEISEPDKIARTTMVSGYCASGDITLARGVF 103
>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 112 bits (279), Expect = 7e-23
Identities = 54/97 (55%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Frame = -3
Query: 279 DFRAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLP 112
D R +AN YA +L+LC S SLAR+VHA+M+ SGF+PRGH LNRL+++YCKS +
Sbjct: 6 DIRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVV 65
Query: 111 YARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
YAR LF++IP D +ARTTLI AY G+ +L R+IF
Sbjct: 66 YARQLFEEIPNPDAIARTTLITAYCALGNLELGREIF 102
>ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339271|gb|EFH69688.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 790
Score = 111 bits (278), Expect = 9e-23
Identities = 55/95 (57%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 RAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYA 106
RAIAN YA+ L LC TS LAR+VH N++T GF+P HILNRLID+YCKS L YA
Sbjct: 9 RAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYA 68
Query: 105 RHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
R LFD+I + D +ARTT+++ Y SGD LAR +F
Sbjct: 69 RQLFDEISEPDKIARTTMVSGYCASGDIALARSVF 103
>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 795
Score = 109 bits (272), Expect = 4e-22
Identities = 53/93 (56%), Positives = 73/93 (78%)
Frame = -3
Query: 279 DFRAIANHYASQLELCCTSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLPYARH 100
D R +A Y +QL T+ +AR+VHA+++TSGF+P ILNRLI+IYCKS + YAR
Sbjct: 2 DVRDLAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARK 61
Query: 99 LFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
LFD+IP+ DIVARTTL++AYS+SG+ KLA+++F
Sbjct: 62 LFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLF 94
>gb|EPS72239.1| hypothetical protein M569_02517, partial [Genlisea aurea]
Length = 786
Score = 107 bits (268), Expect = 1e-21
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = -3
Query: 279 DFRAIANHYASQLELCC----TSHSLARSVHANMVTSGFRPRGHILNRLIDIYCKSRLLP 112
D AN YA +L LC +SLA VH +M+ SGF PR HILNRLID+YCKS
Sbjct: 1 DVGEAANLYAGKLRLCWEKGPAGYSLAGGVHGHMIVSGFIPRRHILNRLIDMYCKSSCFD 60
Query: 111 YARHLFDQIPQQDIVARTTLIAAYSNSGDTKLARKIF 1
YAR +FD+IPQ D+V RTTLIAAYS+ G+ K+AR +F
Sbjct: 61 YARKMFDEIPQPDVVTRTTLIAAYSSYGNPKMARVLF 97