BLASTX nr result
ID: Sinomenium21_contig00046084
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00046084
(557 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74720.1| hypothetical protein VITISV_006957 [Vitis vinifera] 121 1e-25
emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera] 119 7e-25
emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group] 114 1e-23
emb|CAN80110.1| hypothetical protein VITISV_013165 [Vitis vinifera] 114 2e-23
gb|ABA94508.1| retrotransposon protein, putative, Ty1-copia subc... 113 3e-23
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 113 4e-23
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-... 113 4e-23
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ... 113 4e-23
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group... 113 4e-23
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni... 113 4e-23
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 113 4e-23
emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group] 112 5e-23
emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera] 112 5e-23
emb|CAN74172.1| hypothetical protein VITISV_013885 [Vitis vinifera] 112 5e-23
emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group] 112 5e-23
emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group] 112 5e-23
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 112 6e-23
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 112 6e-23
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc... 112 6e-23
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc... 112 6e-23
>emb|CAN74720.1| hypothetical protein VITISV_006957 [Vitis vinifera]
Length = 213
Score = 121 bits (304), Expect = 1e-25
Identities = 52/93 (55%), Positives = 70/93 (75%)
Frame = +1
Query: 274 IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANCKLKKNTRDAISQLKYSQII 453
I +K+N GY+L+QSHYVE +LKRF YD KP T F NCKLK N D++SQL+YS++I
Sbjct: 27 ISVKKNHEGYVLTQSHYVESVLKRFGHYDSKPCATLFDPNCKLKNNMADSVSQLEYSKVI 86
Query: 454 GSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
GS +Y+ N TRPDI Y V RL++YT++ ++HW
Sbjct: 87 GSRMYITNCTRPDITYFVDRLARYTNNPAKEHW 119
>emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera]
Length = 229
Score = 119 bits (297), Expect = 7e-25
Identities = 53/93 (56%), Positives = 71/93 (76%)
Frame = +1
Query: 274 IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANCKLKKNTRDAISQLKYSQII 453
I+I R NG LSQ +YVEKIL++F +DCKP TP+ N +LKKN +++Q++Y+QII
Sbjct: 50 IKITRTPNGLKLSQEYYVEKILRKFEHFDCKPVSTPYNPNSQLKKNREHSVAQIEYAQII 109
Query: 454 GSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
GSL+YLMN RPDIAY+V +LS+YT S +DHW
Sbjct: 110 GSLMYLMNCIRPDIAYAVGKLSQYTQSSNQDHW 142
>emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 114 bits (286), Expect = 1e-23
Identities = 56/112 (50%), Positives = 81/112 (72%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKYLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 LLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>emb|CAN80110.1| hypothetical protein VITISV_013165 [Vitis vinifera]
Length = 811
Score = 114 bits (284), Expect = 2e-23
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Frame = +1
Query: 199 LICSYFFFILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAV 375
++C F+ S + + + + I+I R NG+ LSQ HYVEKIL++F +DCK
Sbjct: 387 VVCETNKFLRSKFDMKDLGEAEVILGIKITRTPNGFKLSQEHYVEKILRKFEHFDCKLVS 446
Query: 376 TPFYANCKLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
TP+ + KLKKN ++SQ++Y+QII SL+YL N T+PDIAY+V RLS YT S +DHW
Sbjct: 447 TPYDPSSKLKKNRELSVSQIEYAQIIRSLMYLTNCTKPDIAYTVGRLSWYTQSPNQDHW 505
>gb|ABA94508.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 347
Score = 113 bits (283), Expect = 3e-23
Identities = 55/93 (59%), Positives = 73/93 (78%)
Frame = +1
Query: 274 IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANCKLKKNTRDAISQLKYSQII 453
I++ R+ENG L QSHYVEKIL RF D KP+ TP+ + L+KN R A +QL+YSQII
Sbjct: 114 IKLIRDENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNKRIARNQLEYSQII 173
Query: 454 GSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
GSL+YL ++TRPDI+++VS+LS++TSS G DHW
Sbjct: 174 GSLMYLASATRPDISFAVSKLSRFTSSPGDDHW 206
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 113 bits (282), Expect = 4e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 SLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1320
Score = 113 bits (282), Expect = 4e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 SLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1460
Score = 113 bits (282), Expect = 4e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 SLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1320
Score = 113 bits (282), Expect = 4e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 SLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 113 bits (282), Expect = 4e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 SLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 113 bits (282), Expect = 4e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 SLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>emb|CAE02325.2| OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 112 bits (281), Expect = 5e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 LLRKNNRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
Length = 1022
Score = 112 bits (281), Expect = 5e-23
Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
Frame = +1
Query: 199 LICSYFFFILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAV 375
++C F+ S + + + + I+I R NG LSQ HYVEKIL++F +DCKP
Sbjct: 816 VVCEIKKFLGSKFDMKDLGETEVILRIKITRTPNGLKLSQEHYVEKILRKFEHFDCKPVS 875
Query: 376 TPFYANCKLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
TP+ + +L KN ++Q+KY+ II SL+YLMN TRPDIAY+V RLS Y S +DHW
Sbjct: 876 TPYDLSLQLMKNREHRVAQIKYTHIIESLMYLMNCTRPDIAYAVGRLSXYIQSPNQDHW 934
>emb|CAN74172.1| hypothetical protein VITISV_013885 [Vitis vinifera]
Length = 406
Score = 112 bits (281), Expect = 5e-23
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Frame = +1
Query: 199 LICSYFFFILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAV 375
++C F+ S + + + I I+ R NG LSQ HYVEKIL++F +DCKP
Sbjct: 230 VVCETKKFLGSKFDMKKLGETEVIIGIKKTRTPNGLKLSQEHYVEKILRKFEHFDCKPMS 289
Query: 376 TPFYANCKLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
T + N +LKKN + +++Q++Y+QIIGSL+YLMN TRP+IAY V RLS+YT S + HW
Sbjct: 290 TSYDPNTQLKKNRKHSVAQIEYAQIIGSLMYLMNCTRPNIAYVVGRLSQYTQSPNQVHW 348
>emb|CAE03764.2| OSJNBa0013K16.13 [Oryza sativa Japonica Group]
Length = 1264
Score = 112 bits (281), Expect = 5e-23
Identities = 57/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + ++I + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 969 FLSQNFDMKDLGVADIILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1028
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1029 LLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1080
>emb|CAE05795.1| OSJNBb0046K02.5 [Oryza sativa Japonica Group]
Length = 1356
Score = 112 bits (281), Expect = 5e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 LLRKNNRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 112 bits (280), Expect = 6e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 955 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1014
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1015 LLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1066
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 112 bits (280), Expect = 6e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1094 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1153
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1154 LLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1205
>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 622
Score = 112 bits (280), Expect = 6e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 302 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 361
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 362 LLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 413
>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 112 bits (280), Expect = 6e-23
Identities = 56/112 (50%), Positives = 80/112 (71%), Gaps = 1/112 (0%)
Frame = +1
Query: 220 FILSNVGLSFYSYSNIYI-IRIKRNENGYILSQSHYVEKILKRFNQYDCKPAVTPFYANC 396
F+ N + +++ + I++ R ENG L QSHYVEKIL RF D KP+ TP+ +
Sbjct: 1007 FLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSL 1066
Query: 397 KLKKNTRDAISQLKYSQIIGSLVYLMNSTRPDIAYSVSRLSKYTSSLGRDHW 552
L+KN R A +QL+YSQIIGSL+YL ++TRPDI+++VS+LS++TS+ G DHW
Sbjct: 1067 LLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHW 1118