BLASTX nr result

ID: Sinomenium21_contig00046054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00046054
         (388 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulga...    70   2e-10
emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. marit...    70   2e-10

>ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435071|ref|YP_004222289.1| hypothetical protein
           BevumaM_p051 [Beta vulgaris subsp. maritima]
           gi|346683271|ref|YP_004842203.1| hypothetical protein
           BemaM_p159 [Beta macrocarpa] gi|9049347|dbj|BAA99357.1|
           orf169 [Beta vulgaris subsp. vulgaris]
           gi|317905724|emb|CBJ14109.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439804|emb|CBJ17516.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|345500189|emb|CBX25008.1| hypothetical protein [Beta
           macrocarpa] gi|384939187|emb|CBL52034.1| hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 169

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/100 (45%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = +3

Query: 12  NHQTRDQSKARQNRKYHGTSSFPEMELSCWSKN*HESRSITTSAVVRIXXXXXXXXXXXX 191
           NHQTRDQS+ARQNRKYHGTSSF EMELSCW         + TS  V +            
Sbjct: 9   NHQTRDQSRARQNRKYHGTSSFTEMELSCWF-------GVRTSMKVDLLRTTSAVVHISF 61

Query: 192 XXTH*VTYGISNLSRRREF----FMCPGR*EVRLASPPPF 299
             +     G  +LS  R      F+C    +VRLAS PPF
Sbjct: 62  PSSKQALLGEHSLSYLRSLDADNFLCA---QVRLASSPPF 98


>emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 169

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/100 (45%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = +3

Query: 12  NHQTRDQSKARQNRKYHGTSSFPEMELSCWSKN*HESRSITTSAVVRIXXXXXXXXXXXX 191
           NHQTRDQS+ARQNRKYHGTSSF EMELSCW         + TS  V +            
Sbjct: 9   NHQTRDQSRARQNRKYHGTSSFTEMELSCWF-------GVRTSMKVDLLRTTSAVVHISF 61

Query: 192 XXTH*VTYGISNLSRRREF----FMCPGR*EVRLASPPPF 299
             +     G  +LS  R      F+C    +VRLAS PPF
Sbjct: 62  PSSKQALLGEHSLSYLRSLDADNFLCA---QVRLASSPPF 98


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