BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00045613
         (422 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...    58   2e-06
gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japoni...    58   2e-06

>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -2

Query: 151  NKPHSHCQLCGKYGHVVINCWHRFDESFVLSSSAISAQ*ATLDHNAAMN 5
            NKP S CQLCGK GHVV +CW+R+DE+F+  S   +A    +D N  M+
Sbjct: 1236 NKPRSTCQLCGKIGHVVADCWYRYDENFIPDSKTAAAASYGVDTNWYMD 1284


>gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 461

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -2

Query: 151 NKPHSHCQLCGKYGHVVINCWHRFDESFVLSSSAISAQ*ATLDHNAAMN 5
           NKP S CQLCGK GHVV +CW+R+DE+F+  S   +A    +D N  M+
Sbjct: 157 NKPRSTCQLCGKIGHVVADCWYRYDENFIPDSKTAAAASYGVDTNWYMD 205