BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00044985
         (374 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36552.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_004507756.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19
ref|XP_004288724.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_007013861.1| Pentatricopeptide repeat (PPR) superfamily p...    95   9e-18
ref|XP_002533229.1| pentatricopeptide repeat-containing protein,...    94   3e-17
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ...    93   4e-17
ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
gb|EXB42930.1| hypothetical protein L484_013952 [Morus notabilis]      92   7e-17
ref|XP_006412675.1| hypothetical protein EUTSA_v10024455mg [Eutr...    92   1e-16
ref|NP_194799.1| pentatricopeptide repeat-containing protein [Ar...    89   8e-16
ref|XP_002867333.1| pentatricopeptide repeat-containing protein ...    88   1e-15
ref|XP_006285932.1| hypothetical protein CARUB_v10007444mg [Caps...    87   2e-15
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    87   2e-15
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citr...    86   5e-15
ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-13
ref|XP_007154866.1| hypothetical protein PHAVU_003G154400g [Phas...    80   4e-13

>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  113 bits (283), Expect = 2e-23
 Identities = 57/94 (60%), Positives = 72/94 (76%)
 Frame = +3

Query: 93  LYASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHA 272
           LY   +  RN F+ LI++ ST HQLNQTHAQ+IL GLH++++ +TKL  KLS L +I  A
Sbjct: 2   LYRGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQA 61

Query: 273 HNLFSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
             LFSTIPNPDLFL+NVLIR+ S N+ PSSA+SL
Sbjct: 62  SLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSL 95


>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  113 bits (283), Expect = 2e-23
 Identities = 57/94 (60%), Positives = 72/94 (76%)
 Frame = +3

Query: 93  LYASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHA 272
           LY   +  RN F+ LI++ ST HQLNQTHAQ+IL GLH++++ +TKL  KLS L +I  A
Sbjct: 2   LYRGIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQA 61

Query: 273 HNLFSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
             LFSTIPNPDLFL+NVLIR+ S N+ PSSA+SL
Sbjct: 62  SLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSL 95


>ref|XP_004507756.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cicer arietinum]
          Length = 783

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/91 (53%), Positives = 65/91 (71%)
 Frame = +3

Query: 102 SASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNL 281
           S + +RNT I+LI+KS T   L QTHAQLIL G H ++  +TKL QKL D G+  HA  +
Sbjct: 7   SGTLSRNTLISLINKSLTFPHLAQTHAQLILNGYHFDLATITKLTQKLFDFGATRHARAI 66

Query: 282 FSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
           F ++P PD+FLFNVL+R  S N+ PSS++SL
Sbjct: 67  FFSVPKPDIFLFNVLVRGFSLNASPSSSISL 97


>ref|XP_004288724.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Fragaria vesca subsp. vesca]
          Length = 790

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/102 (48%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
 Frame = +3

Query: 78  MISRNLYASAS---PNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLS 248
           MISRN+ +S S    +RN F++++ K++T   L QTHAQ+IL G  ++++I+TKL  K S
Sbjct: 1   MISRNISSSCSYAHRDRNLFLSILKKATTLSHLTQTHAQIILNGYQNDLVIITKLTHKFS 60

Query: 249 DLGSITHAHNLFSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
           DL +I HA +L  + P PDLFLFNVLI+  + N+ P S++SL
Sbjct: 61  DLKAIRHARDLVFSFPKPDLFLFNVLIKGFAANASPLSSVSL 102


>ref|XP_007013861.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508784224|gb|EOY31480.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 801

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 2/92 (2%)
 Frame = +3

Query: 75  QMISRNLYASASP--NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLS 248
           QM S+++ ++ SP  +RN F+NL+ KS+T  QL QTHAQLIL G  +++  +TKL  +L 
Sbjct: 14  QMFSKSIASTYSPTRSRNFFLNLLKKSTTLPQLTQTHAQLILNGFRNDLSTITKLTHRLF 73

Query: 249 DLGSITHAHNLFSTIPNPDLFLFNVLIRSLSN 344
           DL + ++A ++F +IPNPDLFLFNVLI+  SN
Sbjct: 74  DLNATSYARDVFLSIPNPDLFLFNVLIKGFSN 105


>ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526949|gb|EEF29150.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 575

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 47/90 (52%), Positives = 62/90 (68%)
 Frame = +3

Query: 105 ASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLF 284
           A   R+ F+NL++KS+T   L Q HA L+L GL ++I + TKL  KL +  + +HA  LF
Sbjct: 12  APHTRHFFLNLLNKSTTLSHLTQLHAHLLLHGLQNDIAVATKLTHKLFNFNATSHASALF 71

Query: 285 STIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
            TIP PDLFLFNVLI+  SNN+ P SA+SL
Sbjct: 72  FTIPKPDLFLFNVLIKGFSNNNSPLSAISL 101


>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511336|gb|AES92478.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 783

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = +3

Query: 99  ASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHN 278
           +S   +RNT  +LI+K+ST   L QTHAQ IL G   ++  LTKL QKL D  +  HA  
Sbjct: 6   SSGKLSRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARA 65

Query: 279 LFSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
           LF ++P PD+FLFNVL+R  S N  PSS++SL
Sbjct: 66  LFFSVPKPDIFLFNVLVRGFSLNDSPSSSISL 97


>ref|XP_006343621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like isoform X1 [Solanum tuberosum]
           gi|565353404|ref|XP_006343622.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g30700-like isoform X2 [Solanum tuberosum]
          Length = 791

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = +3

Query: 78  MISRNLYASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLG 257
           MI R + + A  +RN FI+LI++++T  QLNQ HA LI  GL ++++ +TKL  K SD  
Sbjct: 1   MIYRTIASIAQRDRNFFISLINQATTLSQLNQIHANLIRNGLSNDLITITKLTHKFSDFK 60

Query: 258 SITHAHNLFSTIPN---PDLFLFNVLIRSLSNNSRPSSALSL 374
           SI+ A NLF+T  N   PDLFL+NVLIR LS N     ALSL
Sbjct: 61  SISKAKNLFTTFNNTNPPDLFLYNVLIRGLSRNGLGVEALSL 102


>ref|XP_004242990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Solanum lycopersicum]
          Length = 791

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = +3

Query: 78  MISRNLYASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLG 257
           MI R + + A  +RN FI+LI++++T  QLNQ HA LI  GL ++++ +TKL  K SD  
Sbjct: 1   MIYRTIASIAQRDRNFFISLINQATTLSQLNQLHANLIRNGLSNDLITITKLTHKFSDFK 60

Query: 258 SITHAHNLFSTIPN---PDLFLFNVLIRSLSNNSRPSSALSL 374
           SI+ A NLF+T  N   PDLFL+NVLIR LS N     ALSL
Sbjct: 61  SISKAKNLFTTFNNTNPPDLFLYNVLIRGLSRNGLGVEALSL 102


>gb|EXB42930.1| hypothetical protein L484_013952 [Morus notabilis]
          Length = 781

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 45/91 (49%), Positives = 63/91 (69%)
 Frame = +3

Query: 102 SASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNL 281
           S + +RN  + ++  + T  +L+QTHAQ I+ GL +++  LTKL  KLSDL +I  A +L
Sbjct: 3   SGAGSRNFLVGILKTAGTLPELSQTHAQAIVHGLQNDLAFLTKLTHKLSDLKAIRQACDL 62

Query: 282 FSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
           F T+PNPDLFLFNVL++  S N  P SA+SL
Sbjct: 63  FLTVPNPDLFLFNVLLKGFSTNKSPFSAISL 93


>ref|XP_006412675.1| hypothetical protein EUTSA_v10024455mg [Eutrema salsugineum]
           gi|557113845|gb|ESQ54128.1| hypothetical protein
           EUTSA_v10024455mg [Eutrema salsugineum]
          Length = 790

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 48/87 (55%), Positives = 62/87 (71%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           N+N F +L  + +    LNQTHAQ+IL G  +NI +LTKL Q+LSDLG+I +A +LF ++
Sbjct: 19  NKNNFFDLFKRLTCLSHLNQTHAQIILHG--NNIELLTKLTQRLSDLGAIHYARDLFLSV 76

Query: 294 PNPDLFLFNVLIRSLSNNSRPSSALSL 374
             PD FLFNVLIR  SNN  P S+LSL
Sbjct: 77  QRPDEFLFNVLIRGFSNNKLPHSSLSL 103


>ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
           gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis
           thaliana] gi|7269971|emb|CAB79788.1| putative protein
           [Arabidopsis thaliana] gi|332660398|gb|AEE85798.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 792

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/87 (47%), Positives = 64/87 (73%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           ++NT+++   +S++   L QTHAQ+IL G  ++I +LTKL Q+LSDLG+I +A ++F ++
Sbjct: 19  SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 294 PNPDLFLFNVLIRSLSNNSRPSSALSL 374
             PD+FLFNVL+R  S N  P S+LS+
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLSV 105


>ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313169|gb|EFH43592.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 792

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/87 (45%), Positives = 64/87 (73%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           ++N F++L  +S++   L QTHAQ++L G  ++I +LTKL Q+LSDLG+I +A ++F ++
Sbjct: 19  SKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78

Query: 294 PNPDLFLFNVLIRSLSNNSRPSSALSL 374
             PD+FLFNVL+R  S N  P S+L++
Sbjct: 79  QRPDVFLFNVLMRGFSVNESPHSSLAV 105


>ref|XP_006285932.1| hypothetical protein CARUB_v10007444mg [Capsella rubella]
           gi|482554637|gb|EOA18830.1| hypothetical protein
           CARUB_v10007444mg [Capsella rubella]
          Length = 790

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 42/87 (48%), Positives = 63/87 (72%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           ++N F++L  +S++   L QTHAQ+I+ G   +I +LTKL Q+LSDLG+I +A +LF ++
Sbjct: 17  SKNNFLDLFKRSTSVAHLAQTHAQVIVHGFRYDISLLTKLTQRLSDLGAIYYARDLFLSV 76

Query: 294 PNPDLFLFNVLIRSLSNNSRPSSALSL 374
             PD+FLFNVL+R  S N  P S+LS+
Sbjct: 77  RRPDVFLFNVLMRGFSVNESPHSSLSV 103


>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/99 (44%), Positives = 61/99 (61%)
 Frame = +3

Query: 78  MISRNLYASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLG 257
           MI  N   SA   +  F+ L++ ++T  QL Q  AQLIL G+H ++  +TKL  K  DLG
Sbjct: 1   MICTNTATSAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG 60

Query: 258 SITHAHNLFSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
           ++ H   LF+ +  PDLFLFNVLIR  S+N  P S++ L
Sbjct: 61  AVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFL 99


>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 44/99 (44%), Positives = 61/99 (61%)
 Frame = +3

Query: 78  MISRNLYASASPNRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLG 257
           MI  N   SA   +  F+ L++ ++T  QL Q  AQLIL G+H ++  +TKL  K  DLG
Sbjct: 1   MICTNTATSAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLG 60

Query: 258 SITHAHNLFSTIPNPDLFLFNVLIRSLSNNSRPSSALSL 374
           ++ H   LF+ +  PDLFLFNVLIR  S+N  P S++ L
Sbjct: 61  AVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFL 99


>ref|XP_006474049.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Citrus sinensis]
          Length = 784

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/85 (47%), Positives = 58/85 (68%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           +RN F++L+  + T  QL QTHAQ+I+ G  +++  +TKL  +LSD  +  +A  LF +I
Sbjct: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67

Query: 294 PNPDLFLFNVLIRSLSNNSRPSSAL 368
           P PDLFLFNV+IR  SNN  P S++
Sbjct: 68  PKPDLFLFNVIIRGFSNNEMPKSSI 92


>ref|XP_006453556.1| hypothetical protein CICLE_v10007511mg [Citrus clementina]
           gi|557556782|gb|ESR66796.1| hypothetical protein
           CICLE_v10007511mg [Citrus clementina]
          Length = 784

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 40/85 (47%), Positives = 58/85 (68%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           +RN F++L+  + T  QL QTHAQ+I+ G  +++  +TKL  +LSD  +  +A  LF +I
Sbjct: 8   SRNLFLSLLKGAKTQSQLTQTHAQIIIHGFQNDLSTVTKLAHRLSDFKATCYARALFFSI 67

Query: 294 PNPDLFLFNVLIRSLSNNSRPSSAL 368
           P PDLFLFNV+IR  SNN  P S++
Sbjct: 68  PKPDLFLFNVIIRGFSNNEMPKSSI 92


>ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/83 (49%), Positives = 55/83 (66%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           +RNT + LISK+ T   L +THAQLI  G   ++  +TKL QKL D+G+  HA  LF ++
Sbjct: 7   SRNTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSV 66

Query: 294 PNPDLFLFNVLIRSLSNNSRPSS 362
           P PD+FLFNVLI+  S +   SS
Sbjct: 67  PKPDIFLFNVLIKGFSFSPDASS 89


>ref|XP_007154866.1| hypothetical protein PHAVU_003G154400g [Phaseolus vulgaris]
           gi|561028220|gb|ESW26860.1| hypothetical protein
           PHAVU_003G154400g [Phaseolus vulgaris]
          Length = 778

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/76 (50%), Positives = 53/76 (69%)
 Frame = +3

Query: 114 NRNTFINLISKSSTTHQLNQTHAQLILTGLHSNILILTKLIQKLSDLGSITHAHNLFSTI 293
           +RNT + LI+K+ T   L +THAQLI  G H ++  +TKL QKL D+G+  HA  LF ++
Sbjct: 7   SRNTLLALINKACTFPHLAETHAQLIRNGYHHDLATVTKLTQKLFDVGAAHHARALFFSV 66

Query: 294 PNPDLFLFNVLIRSLS 341
           P PD+FLFNV+I+  S
Sbjct: 67  PKPDIFLFNVVIKGFS 82