BLASTX nr result
ID: Sinomenium21_contig00044555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00044555
(304 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007042279.1| Cleavage and polyadenylation specificity fac... 106 3e-21
gb|EXC33626.1| Cleavage and polyadenylation specificity factor s... 106 4e-21
ref|XP_007221459.1| hypothetical protein PRUPE_ppa004092mg [Prun... 103 2e-20
ref|XP_006373300.1| hypothetical protein POPTR_0017s11270g [Popu... 103 3e-20
ref|XP_006471217.1| PREDICTED: cleavage and polyadenylation spec... 102 7e-20
ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation spec... 102 7e-20
ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation spec... 102 7e-20
ref|XP_007227450.1| hypothetical protein PRUPE_ppa002876mg [Prun... 101 9e-20
ref|XP_002323824.2| cleavage and polyadenylation specificity fac... 101 1e-19
ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citr... 100 2e-19
ref|XP_006431750.1| hypothetical protein CICLE_v10000467mg [Citr... 100 2e-19
ref|XP_007148539.1| hypothetical protein PHAVU_006G217100g [Phas... 100 3e-19
ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Popu... 100 4e-19
ref|XP_006431753.1| hypothetical protein CICLE_v10000468mg [Citr... 99 5e-19
ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citr... 99 5e-19
ref|XP_007224105.1| hypothetical protein PRUPE_ppa015633mg [Prun... 99 6e-19
ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec... 99 6e-19
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera] 99 6e-19
ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation spec... 99 8e-19
ref|XP_006471215.1| PREDICTED: cleavage and polyadenylation spec... 97 2e-18
>ref|XP_007042279.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
cacao] gi|508706214|gb|EOX98110.1| Cleavage and
polyadenylation specificity factor 73-I [Theobroma
cacao]
Length = 694
Score = 106 bits (265), Expect = 3e-21
Identities = 58/99 (58%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISRE+PKV V+H LLV LFGDVK GKL+I+V+GNVA
Sbjct: 596 VLNISREIPKVVVESEAVKMEEENGKKAEKVIHALLVSLFGDVKLGENGKLMISVDGNVA 655
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
+LD QSGDVE ENE LKERV+TAFRRIQSA+KPIP++ +
Sbjct: 656 HLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSAS 694
>gb|EXC33626.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
notabilis]
Length = 693
Score = 106 bits (264), Expect = 4e-21
Identities = 57/99 (57%), Positives = 70/99 (70%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V++ LLV LFGDVK G GK++I V+GNVA
Sbjct: 595 VLNINREVPKVVVESEDTKTEEDNEKKAEKVIYALLVSLFGDVKLRGNGKIMINVDGNVA 654
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
LD QSGDVE ENE LKERVRTAFRRIQSA+KPIP++++
Sbjct: 655 QLDKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLSSS 693
>ref|XP_007221459.1| hypothetical protein PRUPE_ppa004092mg [Prunus persica]
gi|462418193|gb|EMJ22658.1| hypothetical protein
PRUPE_ppa004092mg [Prunus persica]
Length = 530
Score = 103 bits (258), Expect = 2e-20
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
ILNI+RE+PKV V+H LLV LFGDVK G GKL+I V+GNVA
Sbjct: 432 ILNINREVPKVVVESEDVQTEEENGKKVEKVIHALLVSLFGDVKPGGNGKLVIRVDGNVA 491
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
LD QSGDVE ENE LKE+V+ AFRRIQSA+KPIP++
Sbjct: 492 QLDKQSGDVESENEGLKEKVKVAFRRIQSAVKPIPLS 528
>ref|XP_006373300.1| hypothetical protein POPTR_0017s11270g [Populus trichocarpa]
gi|550320036|gb|ERP51097.1| hypothetical protein
POPTR_0017s11270g [Populus trichocarpa]
Length = 618
Score = 103 bits (256), Expect = 3e-20
Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISRE+PKV V++ LLV LFGDVK G GKL+I V+GNVA
Sbjct: 520 VLNISREVPKVIVESEDIKSKEEKEKKAEKVIYALLVSLFGDVKLGGNGKLVIRVDGNVA 579
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPI 282
LD QSGDVE E+E LKERVRTAFRRIQSA++PIP+
Sbjct: 580 ELDKQSGDVESEHEGLKERVRTAFRRIQSAVRPIPL 615
>ref|XP_006471217.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X2 [Citrus sinensis]
Length = 588
Score = 102 bits (253), Expect = 7e-20
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V+H LLV LFGDVK G GK++I V+GNVA
Sbjct: 490 VLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGGNGKVVINVDGNVA 549
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
+LD QSGDVE ENE LKERV+TAF RIQ A+KPIP++
Sbjct: 550 HLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 586
>ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X1 [Citrus sinensis]
Length = 694
Score = 102 bits (253), Expect = 7e-20
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V+H LLV LFGDVK G GK++I V+GNVA
Sbjct: 596 VLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGGNGKVVINVDGNVA 655
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
+LD QSGDVE ENE LKERV+TAF RIQ A+KPIP++
Sbjct: 656 HLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 692
>ref|XP_004296505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Fragaria vesca subsp. vesca]
Length = 693
Score = 102 bits (253), Expect = 7e-20
Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
ILNI+RE+P+V V+H LLV LFGDVK GKL+I+V+GNVA
Sbjct: 595 ILNINREVPRVVIEAEDTTAEEENGRRTERVIHALLVSLFGDVKPGENGKLVISVDGNVA 654
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPI 282
LD QSGDVE ENE LKERV+TAFRRIQSA++PIP+
Sbjct: 655 QLDKQSGDVESENEGLKERVKTAFRRIQSAVRPIPL 690
>ref|XP_007227450.1| hypothetical protein PRUPE_ppa002876mg [Prunus persica]
gi|462424386|gb|EMJ28649.1| hypothetical protein
PRUPE_ppa002876mg [Prunus persica]
Length = 625
Score = 101 bits (252), Expect = 9e-20
Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
ILNI+RE+PKV V+H LLV LFGDVK GKL+I+V+GN+A
Sbjct: 527 ILNINREVPKVVVESEDVKTEEENGKKVEKVIHALLVSLFGDVKPGENGKLVISVDGNLA 586
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
LD QSGDVE ENE LKERV+ AFRRIQSA+KPIP++
Sbjct: 587 QLDKQSGDVESENEGLKERVKAAFRRIQSAVKPIPLS 623
>ref|XP_002323824.2| cleavage and polyadenylation specificity factor family protein
[Populus trichocarpa] gi|550320034|gb|EEF03957.2|
cleavage and polyadenylation specificity factor family
protein [Populus trichocarpa]
Length = 695
Score = 101 bits (251), Expect = 1e-19
Identities = 56/96 (58%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISRE+PKV V++ LV LFGDVK GKL+I+V+GNVA
Sbjct: 597 VLNISREVPKVIVESEDIKSEEENEKKAEKVIYAFLVSLFGDVKLGENGKLVISVDGNVA 656
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPI 282
LD QSGDVE ENE LKERVRTAFRRIQSA++PIP+
Sbjct: 657 ELDKQSGDVESENEGLKERVRTAFRRIQSAVRPIPL 692
>ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
gi|557533873|gb|ESR44991.1| hypothetical protein
CICLE_v10000467mg [Citrus clementina]
Length = 694
Score = 100 bits (249), Expect = 2e-19
Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V+H LLV LFGDVK GKL+I V+GNVA
Sbjct: 596 VLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKLVINVDGNVA 655
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
+LD QSGDVE ENE LKE+V+ AF+RIQSA+KPIP+ +
Sbjct: 656 HLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLAAS 694
>ref|XP_006431750.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
gi|557533872|gb|ESR44990.1| hypothetical protein
CICLE_v10000467mg [Citrus clementina]
Length = 588
Score = 100 bits (249), Expect = 2e-19
Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V+H LLV LFGDVK GKL+I V+GNVA
Sbjct: 490 VLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKLVINVDGNVA 549
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
+LD QSGDVE ENE LKE+V+ AF+RIQSA+KPIP+ +
Sbjct: 550 HLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLAAS 588
>ref|XP_007148539.1| hypothetical protein PHAVU_006G217100g [Phaseolus vulgaris]
gi|561021762|gb|ESW20533.1| hypothetical protein
PHAVU_006G217100g [Phaseolus vulgaris]
Length = 690
Score = 100 bits (248), Expect = 3e-19
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
ILNISR++PK+ VMH LLV LFGDVK + GKL+I+++GNVA
Sbjct: 592 ILNISRDVPKIMDEADAVKIEEESEKKAEKVMHALLVSLFGDVKKSENGKLIISIDGNVA 651
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPI 282
L+ +SG+VE ENE LKERV+TAFRRIQS++KPIP+
Sbjct: 652 ELNKESGEVESENEGLKERVKTAFRRIQSSVKPIPL 687
>ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Populus trichocarpa]
gi|566212712|ref|XP_002323825.2| hypothetical protein
POPTR_0017s11240g [Populus trichocarpa]
gi|550320032|gb|EEF03956.2| hypothetical protein
POPTR_0017s11240g [Populus trichocarpa]
gi|550320033|gb|EEF03958.2| hypothetical protein
POPTR_0017s11240g [Populus trichocarpa]
Length = 699
Score = 99.8 bits (247), Expect = 4e-19
Identities = 55/96 (57%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISRE+PKV V++ LLV LFGDVK GKL++ V+GNVA
Sbjct: 597 VLNISREVPKVIVESEDIKSEEENEKKAEKVIYALLVSLFGDVKLGENGKLVLRVDGNVA 656
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPI 282
LD QSGDVE ENE LKERVRTAFRRI+SA++PIP+
Sbjct: 657 ELDKQSGDVESENEGLKERVRTAFRRIRSAVRPIPL 692
>ref|XP_006431753.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
gi|557533875|gb|ESR44993.1| hypothetical protein
CICLE_v10000468mg [Citrus clementina]
Length = 588
Score = 99.4 bits (246), Expect = 5e-19
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V+H LLV LFGDVK GK++I V+GNVA
Sbjct: 490 VLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKVVINVDGNVA 549
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
+LD QSGDVE ENE LKERV+TAF RIQ A+KPIP++
Sbjct: 550 HLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 586
>ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
gi|557533874|gb|ESR44992.1| hypothetical protein
CICLE_v10000468mg [Citrus clementina]
Length = 694
Score = 99.4 bits (246), Expect = 5e-19
Identities = 54/97 (55%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI+RE+PKV V+H LLV LFGDVK GK++I V+GNVA
Sbjct: 596 VLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDNGKVVINVDGNVA 655
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
+LD QSGDVE ENE LKERV+TAF RIQ A+KPIP++
Sbjct: 656 HLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLS 692
>ref|XP_007224105.1| hypothetical protein PRUPE_ppa015633mg [Prunus persica]
gi|462421041|gb|EMJ25304.1| hypothetical protein
PRUPE_ppa015633mg [Prunus persica]
Length = 692
Score = 99.0 bits (245), Expect = 6e-19
Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
ILNI+RE+PKV V+H LLV LFGDVK GKL+ITV+GNVA
Sbjct: 594 ILNINREVPKVVVESEDVKTEEENGKKVEKVIHALLVSLFGDVKPGENGKLVITVDGNVA 653
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
LD QSGDVE E+E LKE+V+ A RRIQSA+KPIP++
Sbjct: 654 QLDKQSGDVESEHEGLKEKVKAAIRRIQSAVKPIPLS 690
>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Vitis vinifera]
Length = 694
Score = 99.0 bits (245), Expect = 6e-19
Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISRE+PKV V+H LLV LFGDVK G L+I+V+GNVA
Sbjct: 596 VLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVA 655
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
+LD QSG+VE ENE LKERVR AF+RIQ+A+KPIP++ +
Sbjct: 656 HLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 694
>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
Length = 687
Score = 99.0 bits (245), Expect = 6e-19
Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISRE+PKV V+H LLV LFGDVK G L+I+V+GNVA
Sbjct: 589 VLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISVDGNVA 648
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
+LD QSG+VE ENE LKERVR AF+RIQ+A+KPIP++ +
Sbjct: 649 HLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 687
>ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like [Cicer arietinum]
Length = 687
Score = 98.6 bits (244), Expect = 8e-19
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 ILNISREMPKVXXXXXXXXXXXXXXXXX--VMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNISR++PK+ VMH LL LFGDVK GKL+I ++GNVA
Sbjct: 589 VLNISRDLPKIMAESDAVKIEEANEKKAEKVMHALLNSLFGDVKVGENGKLIINIDGNVA 648
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPIT 285
L+ +SG+VE ENE LKERVRTAFRRIQS++KPIP++
Sbjct: 649 ELNKESGEVESENEGLKERVRTAFRRIQSSVKPIPLS 685
>ref|XP_006471215.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-I-like isoform X2 [Citrus sinensis]
Length = 629
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Frame = +1
Query: 1 ILNISREMPK--VXXXXXXXXXXXXXXXXXVMHLLLVPLFGDVKTNGAGKLLITVNGNVA 174
+LNI++E+PK V V+H LLV LFGDV+ GKL+I V+GNVA
Sbjct: 531 VLNINQEVPKLVVESEAIKSEEESGKKAEKVIHALLVSLFGDVQLGENGKLVINVDGNVA 590
Query: 175 NLDSQSGDVECENESLKERVRTAFRRIQSAMKPIPITTA 291
+LD QSGDVE ENE LKE+V+ AF+RIQSA+KPIP++ +
Sbjct: 591 HLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLSAS 629