BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00044485
         (441 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_002511922.1| pentatricopeptide repeat-containing protein,...    78   1e-12
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came...    73   4e-11
ref|XP_002320827.2| pentatricopeptide repeat-containing family p...    72   8e-11
gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]      68   1e-09
ref|XP_007051704.1| Pentatricopeptide repeat superfamily protein...    64   3e-08
ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
ref|XP_006444948.1| hypothetical protein CICLE_v100190672mg, par...    59   7e-07
ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06

>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
           gi|297745328|emb|CBI40408.3| unnamed protein product
           [Vitis vinifera]
          Length = 765

 Score =  104 bits (260), Expect = 1e-20
 Identities = 61/150 (40%), Positives = 88/150 (58%), Gaps = 4/150 (2%)
 Frame = -3

Query: 439 LRHFSADVSPIEQPHAPEAQASVAAETEAKTKGKPNWVIANELLEFLQSSDEDWNQEELH 260
           LRH SA+  P   P AP  Q   ++             + N ++E LQ++D DWN+++LH
Sbjct: 30  LRHLSAE--PDHHPPAPPPQNDSSS-------------VVNLVVELLQTTDNDWNEDKLH 74

Query: 259 RLV----STIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAYHAIFDVAS 92
           +L+    S   P + L+Q+ R LG++AKA+KFF W+Q N+      L S    A+F+ AS
Sbjct: 75  QLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFEHAS 134

Query: 91  REPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           REPNSH KL +LF  SK   +PLSV++A L
Sbjct: 135 REPNSHNKLLDLFKTSKSHKIPLSVNAATL 164


>ref|XP_002511922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549102|gb|EEF50591.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 346

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 55/152 (36%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
 Frame = -3

Query: 439 LRHFSADVSPIEQPHAPEAQASVAAETEAKTKGKP---NWVIANELLEFLQSSDEDWNQE 269
           +RHF  +++   QP  P+         E  T   P   +  I    ++ LQ  D +WN  
Sbjct: 28  VRHFCIELA---QPSPPQQN------DEESTPSPPLQNDESIIKRAVQLLQIPDHEWNTT 78

Query: 268 ELHRLV-STIAPTNRLV-QVIRRLGNSAKAVKFFEWIQKN-NSSIFQVLSSPAYHAIFDV 98
           +L+ L+ S ++P+ RL+ Q+ RRL +S++A+KF +++Q N  +S  Q LSS  + AIF++
Sbjct: 79  QLNNLIFSALSPSPRLLFQIARRLPSSSQALKFLKYLQNNFPTSNTQHLSS-TFQAIFEL 137

Query: 97  ASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           ASRE +S   L EL+  SKE  +PL+++SA L
Sbjct: 138 ASRENDSRTNLYELYKVSKEWNIPLTINSATL 169


>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
          Length = 771

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
 Frame = -3

Query: 439 LRHFSADVSPIEQPHAPEAQASVAAETEAKTKGKPNWVIANELLEFLQSSDEDWNQ--EE 266
           LRH S+  +    P  P                 PN ++  ++L  LQ+ + DWN   +E
Sbjct: 31  LRHLSSSATDPPPPEPPPPL--------------PNSILTTQILNLLQTHEIDWNNNNDE 76

Query: 265 LHRLV--STIAPTN-RLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLS-SPAYHAIFDV 98
           L +L+  ST +P +  L ++ R LG + KA+ FFE+ +  + S     S S ++ AIF++
Sbjct: 77  LRQLLFSSTDSPHSFSLYKITRSLGTATKALNFFEFFRTQSPSPPDPSSLSSSFQAIFEL 136

Query: 97  ASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           AS++PN   KLSEL   SK+  +PL+  SA L
Sbjct: 137 ASQQPNPPTKLSELLTISKDHNIPLNFSSATL 168


>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550323783|gb|EEE99142.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 720

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
 Frame = -3

Query: 325 IANELLEFLQSSDEDWNQEELHRLVSTIAPTNR-----LVQVIRRLGNSAKAVKFFEWIQ 161
           I  E L+ LQ    +WN  +L++L+ T +P +        Q+ RRL +S++A+KF  ++Q
Sbjct: 5   IITEALQLLQIPGNEWNTTQLNQLLFTDSPPSSSSPRLFYQITRRLPSSSQALKFLNYLQ 64

Query: 160 KNNSSI--FQVLSSPAYHAIFDVASREPNSHLKLSELFHKSKEQGVPLSVDSAA 5
            N+ S    Q L S  + AIF++A  EP+S+  LS L+  SKE  +PL+V++A+
Sbjct: 65  NNSPSSPDTQSLLSYTFQAIFELAFCEPDSNANLSRLYKTSKELNIPLTVNAAS 118


>gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]
          Length = 769

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/118 (33%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
 Frame = -3

Query: 340 KPNWVIANELLEFLQSSDEDWNQEELHRLV----STIAPTNRLVQVIRRLGNSAKAVKFF 173
           K +    +  L+ LQ  + +WN E+L  L+     + +PT RL+ + RRL +S+KA+ FF
Sbjct: 42  KDDETFISHALQLLQPPETEWNAEQLQTLLFSDSESPSPT-RLLHIARRLDSSSKALNFF 100

Query: 172 EWIQKNNS-SIFQVLSSPAYHAIFDVASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           + +++N+       L +  + A+ ++ASREP+   +L EL+  S+E+ VPL++++A L
Sbjct: 101 DHVRENSHLPKDSSLLASTFQAVLELASREPSWEKRLFELYTTSRERNVPLTINAATL 158


>ref|XP_007051704.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508703965|gb|EOX95861.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 764

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
 Frame = -3

Query: 436 RHFSADVSPIEQPHAPEAQASVAAETEAKTKGKPNWVIANELLEFLQSSDEDWNQEE-LH 260
           RH   + +P   P  P+ + S   +             A +LL  L++  E+W+  + L 
Sbjct: 30  RHLCTEPNPEPLPAPPQDEESKIIQ-------------AVQLL--LETPHEEWSSSQPLQ 74

Query: 259 RLVSTIAPTNR--LVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAYHAIFDVASRE 86
            L+ +  P +   L+Q+ RRL +S++A+ FF+ +Q+N+ S      S  + A+ + A RE
Sbjct: 75  SLLFSSPPLSPRFLLQITRRLPSSSEALNFFKHLQQNSPSQDAQFLSYPFQAVLEQAGRE 134

Query: 85  PNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           P+S  +LS+L+  SK+  +PL+V++A L
Sbjct: 135 PDSATRLSQLYQDSKQWEIPLTVNAAVL 162


>ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 771

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 36/114 (31%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
 Frame = -3

Query: 325 IANELLEFLQSSDEDWNQEELHRLV---STIAPTNR-LVQVIRRLGNSAKAVKFFEWIQK 158
           +  ++L+ LQ +++ WN  +L  L+   ST +P+ R L+ + RRL +  KA+KFF+++ +
Sbjct: 49  LVTQVLQLLQPNEQHWNFPQLQTLLFPNSTSSPSPRSLLHITRRLASPNKALKFFDFVSQ 108

Query: 157 NNSSIF--QVLSSPAYHAIFDVASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           N +     + L S ++ A+ ++  R+P S   L EL+  +K++ VP+S  +A L
Sbjct: 109 NLTPQDPPKALLSSSFQALVELTLRQPPSETNLYELYKMAKDRNVPISPKAAGL 162


>ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Solanum tuberosum]
          Length = 761

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
 Frame = -3

Query: 439 LRHFSADVSPIEQPHAPEAQASVAAETEA--KTKGKPNWVIANELLEFLQSSDEDWNQEE 266
           LRHFS ++   ++P  P   +    E  +  KT    +W+  ++L+EFL +         
Sbjct: 25  LRHFSGEIDDTQKPLPPPPTSFAVPEIVSLLKTNDHNDWISNSQLVEFLHTPP------- 77

Query: 265 LHRLVSTIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAY--HAIFDVAS 92
                   +PT+ L+++ R+LG++ KA+ FFE+ + ++SS     SS ++   AI + A 
Sbjct: 78  --------SPTS-LLKITRQLGSTEKALHFFEFFKTHSSSSSSNPSSLSFTFQAILEQAM 128

Query: 91  REPNSHL--KLSELFHKSKEQGVPLSVDSAAL 2
            E  S +  KL +LF  +K++ +PLS+++A L
Sbjct: 129 HEEKSDVPGKLFQLFSFAKDRKIPLSINAATL 160


>ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 763

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
 Frame = -3

Query: 316 ELLEFLQSSDEDWNQEELHRLV---STIAPTNR-LVQVIRRLGNSAKAVKFFEWIQKN-- 155
           ++L+ LQ +++ WN  +LH L+   ST +P+ R L+ + R L +  KA+KFF+++ +N  
Sbjct: 49  QVLQVLQPNEQHWNFPQLHTLLFPSSTSSPSPRTLLHITRCLASPTKALKFFDFVSQNLT 108

Query: 154 -NSSIFQVLSSPAYHAIFDVASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
                  VLSS ++ A+ ++  R+P S   L EL+  +K++ VP+S  +  L
Sbjct: 109 PQDPPKAVLSS-SFEALVELTLRQPPSETNLYELYKMAKDRNVPISPKAVRL 159


>ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g28460-like [Citrus sinensis]
          Length = 757

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
 Frame = -3

Query: 328 VIANELLEFLQSSDEDWNQE-ELHRLV--STIAPTNRLVQVIRRLGNSAKAVKFFEWIQK 158
           +I   L   LQ+ D +W    ++  L+  ST        Q+ RR  +S++A+ FF ++Q 
Sbjct: 41  IITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQITRRFPSSSRALSFFNFLQS 100

Query: 157 NNSSIFQVLS-SPAYHAIFDVASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           N  +     S S AY A+F++A RE  S   L +L+   K+Q +PLS++SA L
Sbjct: 101 NLPTEANTSSLSYAYQAVFELAIRERMSPESLFDLYKACKDQNIPLSINSATL 153


>ref|XP_006444948.1| hypothetical protein CICLE_v100190672mg, partial [Citrus
           clementina] gi|557547210|gb|ESR58188.1| hypothetical
           protein CICLE_v100190672mg, partial [Citrus clementina]
          Length = 260

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
 Frame = -3

Query: 328 VIANELLEFLQSSDEDWNQE-ELHRLV--STIAPTNRLVQVIRRLGNSAKAVKFFEWIQK 158
           +I   L   LQ+ D +W    ++  L+  ST        Q+ RR  +S++A+ FF ++Q 
Sbjct: 41  IITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQITRRFPSSSRALSFFNFLQS 100

Query: 157 NNSSIFQVLS-SPAYHAIFDVASREPNSHLKLSELFHKSKEQGVPLSVDSAAL 2
           N  +     S S AY A+F++A RE  S   L +L+   K+Q +PLS++SA L
Sbjct: 101 NLPTEANTSSLSYAYQAVFELAIRERMSPESLFDLYKACKDQNIPLSINSATL 153


>ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Solanum lycopersicum]
          Length = 761

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
 Frame = -3

Query: 439 LRHFSADVSPIEQPHAPEAQASVAAE---TEAKTKGKPNWVIANELLEFLQSSDEDWNQE 269
           LR FS ++   ++P  P+   S A     +  KT    +W+  +EL+E+L +        
Sbjct: 25  LRCFSGEIDDTQKP-LPQPPISFAVPEIVSLLKTTDHNDWISNSELVEYLHTPP------ 77

Query: 268 ELHRLVSTIAPTNRLVQVIRRLGNSAKAVKFFEWIQKNNSSIFQVLSSPAY--HAIFDVA 95
                    +PT+ L+++ R+LG++ KA++FFE+ + ++SS     SS ++   AI + A
Sbjct: 78  ---------SPTS-LLKITRQLGSTEKALQFFEFFKTHSSSSSSNPSSLSFTFQAILEQA 127

Query: 94  SREPNSHL--KLSELFHKSKEQGVPLSVDSAAL 2
            RE  S +  KL +LF  +K++ +PLS+++  L
Sbjct: 128 MREEKSDVPRKLFQLFSFAKDRKIPLSINAGTL 160