BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00044476
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]   169   3e-40
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   164   9e-39
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]   161   8e-38
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   159   4e-37
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   148   7e-34
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   148   7e-34
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          143   3e-32
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               128   7e-28
emb|CAD41546.2| OSJNBb0091E11.16 [Oryza sativa Japonica Group]        125   5e-27
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   125   6e-27
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...   125   6e-27
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ...   125   8e-27
dbj|BAB03249.1| polyprotein [Oryza sativa]                            125   8e-27
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc...   125   8e-27
gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subc...   125   8e-27
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   125   8e-27
gb|ABA97586.1| retrotransposon protein, putative, Ty1-copia subc...   125   8e-27
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc...   125   8e-27
gb|AAX96359.1| retrotransposon protein, putative, Ty1-copia sub-...   125   8e-27
emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]        125   8e-27

>emb|CAN82978.1| hypothetical protein VITISV_023328 [Vitis vinifera]
          Length = 474

 Score =  169 bits (429), Expect = 3e-40
 Identities = 79/92 (85%), Positives = 86/92 (93%)
 Frame = +2

Query: 8   ELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEVEN 187
           E L+LIHSDICDLKFVQTRGGKKYFITFIDDCTR+CYVYLLKSKDEA+EMF+HYKNEVEN
Sbjct: 383 EPLDLIHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKNEVEN 442

Query: 188 QLGKRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           QL K+IKAI+SDRGGEYE PF EF  +HGIIH
Sbjct: 443 QLSKKIKAIRSDRGGEYESPFEEFCLEHGIIH 474


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  164 bits (416), Expect = 9e-39
 Identities = 77/92 (83%), Positives = 84/92 (91%)
 Frame = +2

Query: 8   ELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEVEN 187
           E L+L HSDICDLKFVQTRGGKKYFITFIDDCTR+CYVYLLKSKDEA+EMF+HYK EVEN
Sbjct: 655 EPLDLFHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKIEVEN 714

Query: 188 QLGKRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           QL K+IKAI+SDRGGEYE PF EF  +HGIIH
Sbjct: 715 QLSKKIKAIRSDRGGEYESPFEEFCLEHGIIH 746


>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
          Length = 839

 Score =  161 bits (408), Expect = 8e-38
 Identities = 72/89 (80%), Positives = 83/89 (93%)
 Frame = +2

Query: 17  NLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEVENQLG 196
           +LIH+DICDLKFVQTRGGK YFITFIDDC R+CYVYLL+SKDEAL++F+HYKNEVENQL 
Sbjct: 326 DLIHNDICDLKFVQTRGGKMYFITFIDDCIRYCYVYLLRSKDEALDVFKHYKNEVENQLS 385

Query: 197 KRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           ++IKAI+SDRGG+YE PFGEF  KHGIIH
Sbjct: 386 RKIKAIRSDRGGKYEAPFGEFCSKHGIIH 414


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  159 bits (402), Expect = 4e-37
 Identities = 73/94 (77%), Positives = 83/94 (88%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N E ++LIHSDICDL FVQ RGGK+YFITFIDDCTR+ YVYLL+ KDEAL++F+HYKNEV
Sbjct: 180 NTEPMDLIHSDICDLMFVQKRGGKRYFITFIDDCTRYYYVYLLRRKDEALDVFKHYKNEV 239

Query: 182 ENQLGKRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           ENQL K IKAIKSDRGGEY+ PFGEF  +HGIIH
Sbjct: 240 ENQLSKNIKAIKSDRGGEYDAPFGEFCSEHGIIH 273


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  148 bits (374), Expect = 7e-34
 Identities = 69/94 (73%), Positives = 79/94 (84%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N E L+LIHSDICDLKFVQTRGG KYFITF+DD T++CYVYLLKSKDEA+E F  YK EV
Sbjct: 524 NTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEV 583

Query: 182 ENQLGKRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           ENQL K+IK ++SDRGGEYE PF +   +HGIIH
Sbjct: 584 ENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIH 617


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  148 bits (374), Expect = 7e-34
 Identities = 69/94 (73%), Positives = 79/94 (84%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N E L+LIHSDICDLKFVQTRGG KYFITF+DD T++CYVYLLKSKDEA+E F  YK EV
Sbjct: 524 NTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEV 583

Query: 182 ENQLGKRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           ENQL K+IK ++SDRGGEYE PF +   +HGIIH
Sbjct: 584 ENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIH 617


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  143 bits (360), Expect = 3e-32
 Identities = 67/94 (71%), Positives = 77/94 (81%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N E L+LIHSDICD K +QTRGG KYFITFIDDCT++CYVYLLKSKDEAL+ F  YKNEV
Sbjct: 513 NSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSKDEALDKFILYKNEV 572

Query: 182 ENQLGKRIKAIKSDRGGEYEVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY VPF     + GIIH
Sbjct: 573 ENQLNRKIKELRSDRGGEYVVPFMSLCEQSGIIH 606


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  128 bits (322), Expect = 7e-28
 Identities = 59/84 (70%), Positives = 69/84 (82%)
 Frame = +2

Query: 32  DICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEVENQLGKRIKA 211
           +ICD+K   +RGGKKYFITFIDDCTRFCYVYLL SKDEA++ F+ YKNEVENQL  +IK 
Sbjct: 541 NICDMKSTPSRGGKKYFITFIDDCTRFCYVYLLNSKDEAIDAFKQYKNEVENQLNLKIKM 600

Query: 212 IKSDRGGEYEVPFGEFYRKHGIIH 283
           I+SDRGGEYE  F E   ++GIIH
Sbjct: 601 IRSDRGGEYESLFAEICLEYGIIH 624


>emb|CAD41546.2| OSJNBb0091E11.16 [Oryza sativa Japonica Group]
          Length = 839

 Score =  125 bits (315), Expect = 5e-27
 Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTR+CYVYLLK+KDE L  F+ YK EV
Sbjct: 306 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRYCYVYLLKTKDETLHYFKIYKAEV 365

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIHGLVHEHA 304
           ENQL ++IK ++SDRGGEY    F  F +K GIIH   H ++
Sbjct: 366 ENQLERKIKRLRSDRGGEYFSNEFTSFCKKFGIIHERTHPYS 407


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L LIHSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 591 NLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 650

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 651 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 685


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1479

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/95 (63%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L LIHSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 662 NLAPLELIHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 721

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 722 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 756


>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 451 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEV 510

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  ++GIIH
Sbjct: 511 ENQLERKIKRLRSDRGGEYFSNEFTSFCEEYGIIH 545


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 451 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 510

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 511 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 545


>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1022

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 516 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEV 575

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  ++GIIH
Sbjct: 576 ENQLERKIKRLRSDRGGEYFSNEFTSFCEEYGIIH 610


>gb|ABA98084.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1298

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 596 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 655

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 656 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 690


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 596 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 655

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 656 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 690


>gb|ABA97586.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 786

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 35  NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEV 94

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  ++GIIH
Sbjct: 95  ENQLERKIKRLRSDRGGEYFSNEFTSFCEEYGIIH 129


>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1287

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 596 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 655

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 656 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 690


>gb|AAX96359.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549036|gb|ABA91833.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 709

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 437 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKTYKAEV 496

Query: 182 ENQLGKRIKAIKSDRGGEYEV-PFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 497 ENQLERKIKLLRSDRGGEYFFNEFASFCEEFGIIH 531


>emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  125 bits (313), Expect = 8e-27
 Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   NIELLNLIHSDICDLKFVQTRGGKKYFITFIDDCTRFCYVYLLKSKDEALEMFQHYKNEV 181
           N+  L L+HSD+C++  V T+GGKKYF+T IDDCTRFCYVYLLK+KDEAL  F+ YK EV
Sbjct: 504 NLAPLELVHSDLCEMNGVLTKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEV 563

Query: 182 ENQLGKRIKAIKSDRGGEY-EVPFGEFYRKHGIIH 283
           ENQL ++IK ++SDRGGEY    F  F  + GIIH
Sbjct: 564 ENQLERKIKRLRSDRGGEYFSNEFASFCEEFGIIH 598