BLASTX nr result
ID: Sinomenium21_contig00044216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium21_contig00044216
(818 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi... 99 2e-18
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l... 87 6e-15
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part... 86 2e-14
ref|XP_007041612.1| Pentatricopeptide repeat (PPR) superfamily p... 86 2e-14
ref|XP_007041611.1| Pentatricopeptide repeat (PPR) superfamily p... 86 2e-14
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi... 85 4e-14
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr... 85 4e-14
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,... 85 4e-14
ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutr... 84 8e-14
ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [A... 83 1e-13
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar... 81 4e-13
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi... 81 5e-13
ref|XP_007200313.1| hypothetical protein PRUPE_ppa001249mg [Prun... 79 3e-12
ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Popu... 78 4e-12
gb|EYU38033.1| hypothetical protein MIMGU_mgv1a026472mg [Mimulus... 76 2e-11
ref|XP_004504955.1| PREDICTED: pentatricopeptide repeat-containi... 74 8e-11
ref|XP_007159233.1| hypothetical protein PHAVU_002G220400g [Phas... 73 1e-10
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi... 71 4e-10
ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containi... 71 5e-10
ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containi... 69 2e-09
>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
protein product [Vitis vinifera]
Length = 878
Score = 98.6 bits (244), Expect = 2e-18
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
N+ F+ K + FSG+DWQ I+HRDDGSGLA K LKRVQKGWGQGS+SS+QPQK D L
Sbjct: 814 NESAFNRQK--RNKFSGSDWQTIIHRDDGSGLALKALKRVQKGWGQGSISSLQPQKNDFL 871
Query: 202 DYWEDT 219
DYWE T
Sbjct: 872 DYWEGT 877
>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 874
Score = 87.4 bits (215), Expect = 6e-15
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +1
Query: 7 HRKRYNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQ 186
H+K++N+ +SGN+WQ ILHRDDGSG+A K L RV+KGWGQG +SS QPQ
Sbjct: 815 HQKKHNK------------YSGNNWQNILHRDDGSGIALKSLSRVKKGWGQGDISSFQPQ 862
Query: 187 KKDILDYWED 216
+ D LDYWED
Sbjct: 863 RVDYLDYWED 872
>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
gi|482565669|gb|EOA29858.1| hypothetical protein
CARUB_v10012952mg, partial [Capsella rubella]
Length = 881
Score = 85.9 bits (211), Expect = 2e-14
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = +1
Query: 10 RKRYNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQK 189
R + +K HG GN+WQ ILHRDDGSG+A K L RV+KGWGQG +SS QPQ+
Sbjct: 819 RDLHQKKHTRHG--------GNNWQNILHRDDGSGIALKTLSRVKKGWGQGDISSFQPQR 870
Query: 190 KDILDYWED 216
D LDYWED
Sbjct: 871 DDYLDYWED 879
>ref|XP_007041612.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao] gi|508705547|gb|EOX97443.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 2 [Theobroma cacao]
Length = 632
Score = 85.5 bits (210), Expect = 2e-14
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
N +E H K E F G+DWQ I+HRDDGSG+A K LKRVQKGWGQGS+S +QP K
Sbjct: 568 NAREPIHRK--EIKFGGDDWQTIVHRDDGSGIALKALKRVQKGWGQGSISRLQPHKNKFH 625
Query: 202 DYWE 213
DYWE
Sbjct: 626 DYWE 629
>ref|XP_007041611.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|508705546|gb|EOX97442.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 872
Score = 85.5 bits (210), Expect = 2e-14
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
N +E H K E F G+DWQ I+HRDDGSG+A K LKRVQKGWGQGS+S +QP K
Sbjct: 808 NAREPIHRK--EIKFGGDDWQTIVHRDDGSGIALKALKRVQKGWGQGSISRLQPHKNKFH 865
Query: 202 DYWE 213
DYWE
Sbjct: 866 DYWE 869
>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
[Citrus sinensis] gi|568866524|ref|XP_006486605.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
Length = 889
Score = 84.7 bits (208), Expect = 4e-14
Identities = 43/78 (55%), Positives = 53/78 (67%)
Frame = +1
Query: 7 HRKRYNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQ 186
H+ N E K ++ G+ WQ ILHR+DGSG+A K LKRVQKGWGQGS+SS+Q Q
Sbjct: 808 HKISQNAGELVRRK--QNKNGGSVWQDILHREDGSGIALKTLKRVQKGWGQGSISSLQAQ 865
Query: 187 KKDILDYWEDT**HQFNI 240
K D+LDYWE H+ NI
Sbjct: 866 KYDLLDYWEPGAEHRGNI 883
>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
gi|557524367|gb|ESR35673.1| hypothetical protein
CICLE_v10027787mg [Citrus clementina]
Length = 889
Score = 84.7 bits (208), Expect = 4e-14
Identities = 43/78 (55%), Positives = 53/78 (67%)
Frame = +1
Query: 7 HRKRYNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQ 186
H+ N E K ++ G+ WQ ILHR+DGSG+A K LKRVQKGWGQGS+SS+Q Q
Sbjct: 808 HKISQNAGELVRRK--QNKNGGSVWQDILHREDGSGIALKTLKRVQKGWGQGSISSLQAQ 865
Query: 187 KKDILDYWEDT**HQFNI 240
K D+LDYWE H+ NI
Sbjct: 866 KYDLLDYWEPGAEHRGNI 883
>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 84.7 bits (208), Expect = 4e-14
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +1
Query: 67 SGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDILDYWE 213
+GNDW I+HRDDGSG+A K LKRVQKGWGQGS+SS+QPQK + DYW+
Sbjct: 823 AGNDWPIIVHRDDGSGIALKALKRVQKGWGQGSISSLQPQKLEFFDYWD 871
>ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutrema salsugineum]
gi|557110509|gb|ESQ50800.1| hypothetical protein
EUTSA_v10022542mg [Eutrema salsugineum]
Length = 877
Score = 83.6 bits (205), Expect = 8e-14
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +1
Query: 55 EDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDILDYWED 216
++ + GN+WQ ILHRDDGSG+A K L RV+KGWGQG +SS QP + D LDYWED
Sbjct: 822 DNKYGGNNWQNILHRDDGSGIALKSLTRVKKGWGQGDISSFQPPRVDYLDYWED 875
>ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [Amborella trichopoda]
gi|548851266|gb|ERN09542.1| hypothetical protein
AMTR_s00029p00147240 [Amborella trichopoda]
Length = 889
Score = 82.8 bits (203), Expect = 1e-13
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 6/75 (8%)
Frame = +1
Query: 10 RKRYNQKEFSHGKPY------EDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVS 171
R++ +KE GK ED G+DWQ++LHRDDGSG+A KVLKR+QKGWGQG++
Sbjct: 813 REKRTRKEGLDGKKSIGNHLKEDGSGGSDWQSLLHRDDGSGIAMKVLKRIQKGWGQGAIP 872
Query: 172 SIQPQKKDILDYWED 216
+ P K DIL+ WE+
Sbjct: 873 TSPPPKHDILEDWEE 887
>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 81.3 bits (199), Expect = 4e-13
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +1
Query: 7 HRKRYNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQ 186
H+K++N+ GN+WQ ILHRDDGSG+A + L RV+KGWGQG +SS QP
Sbjct: 815 HQKKHNKN------------GGNNWQNILHRDDGSGIALRSLSRVKKGWGQGDISSFQPP 862
Query: 187 KKDILDYWED 216
+ D LDYWED
Sbjct: 863 RVDYLDYWED 872
>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like isoform X1 [Glycine max]
Length = 875
Score = 80.9 bits (198), Expect = 5e-13
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
N+K GK +D G+DWQ I++RD GSG+A K LKRVQKGWGQGS+SS+QPQ+ D L
Sbjct: 811 NRKRVIPGKLLKDG--GSDWQDIINRDAGSGIALKTLKRVQKGWGQGSISSLQPQQNDFL 868
Query: 202 DYWE 213
DY++
Sbjct: 869 DYYD 872
>ref|XP_007200313.1| hypothetical protein PRUPE_ppa001249mg [Prunus persica]
gi|462395713|gb|EMJ01512.1| hypothetical protein
PRUPE_ppa001249mg [Prunus persica]
Length = 872
Score = 78.6 bits (192), Expect = 3e-12
Identities = 35/61 (57%), Positives = 47/61 (77%)
Frame = +1
Query: 25 QKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDILD 204
++E GKP + G+DWQ I+HRDDGSG+A K LKRVQKGWG+GS++S+Q QK + +D
Sbjct: 814 EREIIGGKPSNNG--GSDWQTIVHRDDGSGIALKTLKRVQKGWGRGSLTSLQSQKNEFID 871
Query: 205 Y 207
Y
Sbjct: 872 Y 872
>ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Populus trichocarpa]
gi|550341611|gb|ERP62640.1| hypothetical protein
POPTR_0004s21560g [Populus trichocarpa]
Length = 874
Score = 77.8 bits (190), Expect = 4e-12
Identities = 37/57 (64%), Positives = 44/57 (77%)
Frame = +1
Query: 43 GKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDILDYWE 213
GK +D S +WQ ILHRDDGSG+A K LKRVQ+G QGS+SS++PQK D LDYWE
Sbjct: 817 GKKNKDGES--EWQTILHRDDGSGIALKALKRVQRGLDQGSISSLEPQKDDFLDYWE 871
>gb|EYU38033.1| hypothetical protein MIMGU_mgv1a026472mg [Mimulus guttatus]
Length = 869
Score = 75.9 bits (185), Expect = 2e-11
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +1
Query: 28 KEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDILDY 207
K+ +H K Y D G+DWQ ILHRDDGS +A K LKRVQKGWGQG +Q QK ++ D
Sbjct: 810 KKLNHSKKYSDG--GSDWQTILHRDDGSAIAMKTLKRVQKGWGQG---YLQAQKNEVFDE 864
Query: 208 WEDT 219
W+ T
Sbjct: 865 WDVT 868
>ref|XP_004504955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cicer arietinum]
Length = 867
Score = 73.6 bits (179), Expect = 8e-11
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
N K K ++D G+DWQ I++RD GSG+A K LKRV+K WGQGS+SS+ PQK D L
Sbjct: 805 NGKTIFRRKLHKDG--GSDWQDIINRDVGSGIALKTLKRVEKSWGQGSISSLLPQKNDFL 862
Query: 202 DYWE 213
DY++
Sbjct: 863 DYYD 866
>ref|XP_007159233.1| hypothetical protein PHAVU_002G220400g [Phaseolus vulgaris]
gi|561032648|gb|ESW31227.1| hypothetical protein
PHAVU_002G220400g [Phaseolus vulgaris]
Length = 886
Score = 73.2 bits (178), Expect = 1e-10
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
N+ GK + D G+DW+ I++RD GSG+A K LKRVQKGWGQGS++S+Q Q D L
Sbjct: 822 NRNRVIPGKLHNDG--GSDWKDIVNRDGGSGIALKTLKRVQKGWGQGSITSLQSQPNDFL 879
Query: 202 DYWE 213
DY++
Sbjct: 880 DYYD 883
>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
[Cucumis sativus]
Length = 875
Score = 71.2 bits (173), Expect = 4e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1
Query: 19 YNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDI 198
+N+ E + + ++ +DWQ I+HR+DGSG+A K LKRV KGWGQGS+++ QPQK
Sbjct: 808 FNEHENKNIRGRLNNNDESDWQKIVHRNDGSGIAQKTLKRVLKGWGQGSIATCQPQKFST 867
Query: 199 LDYWE 213
D+W+
Sbjct: 868 RDHWD 872
>ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
[Cucumis sativus] gi|449472527|ref|XP_004153621.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 70.9 bits (172), Expect = 5e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = +1
Query: 19 YNQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDI 198
+N+ E + + ++ +DWQ I+HR+DGSG+A K LKRV KGWGQGS+++ QPQK
Sbjct: 808 FNEHENKNIRGRLNNNDESDWQKIVHRNDGSGIAQKTLKRVLKGWGQGSIATSQPQKFST 867
Query: 199 LDYWE 213
D+W+
Sbjct: 868 RDHWD 872
>ref|XP_004290060.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Fragaria vesca subsp. vesca]
Length = 871
Score = 69.3 bits (168), Expect = 2e-09
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +1
Query: 22 NQKEFSHGKPYEDSFSGNDWQAILHRDDGSGLAGKVLKRVQKGWGQGSVSSIQPQKKDIL 201
+Q++ GKPY G+DWQ I++RDDGSG+ K LKRVQKGWG+ +++S+Q +K
Sbjct: 813 SQRDIIGGKPYS---CGSDWQTIVNRDDGSGVILKTLKRVQKGWGRANLTSLQTRKDQFF 869
Query: 202 DY 207
DY
Sbjct: 870 DY 871