BLASTX nr result

ID: Sinomenium21_contig00044168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium21_contig00044168
         (392 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535172.1| conserved hypothetical protein [Ricinus comm...    51   5e-07

>ref|XP_002535172.1| conserved hypothetical protein [Ricinus communis]
           gi|223523836|gb|EEF27212.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 50.8 bits (120), Expect(2) = 5e-07
 Identities = 22/28 (78%), Positives = 22/28 (78%)
 Frame = -3

Query: 255 PKRSNPRGGPQPKGARRTNGKRDKESSW 172
           P    P GGPQPKGARRT GKRDKESSW
Sbjct: 56  PSGLTPPGGPQPKGARRTKGKRDKESSW 83



 Score = 28.5 bits (62), Expect(2) = 5e-07
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = -2

Query: 301 RMADTLTAFETIQYN 257
           RMADTLTAF+T +YN
Sbjct: 41  RMADTLTAFDTKKYN 55


Top